LOCUS BC139718 2166 bp mRNA linear HUM 18-APR-2007 DEFINITION Homo sapiens prostaglandin F2 receptor negative regulator, mRNA (cDNA clone IMAGE:40012155), partial cds. ACCESSION BC139718 VERSION BC139718.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2166) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2166) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-APR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCG Plate: 18 Row: h Column: 10. FEATURES Location/Qualifiers source 1..2166 /db_xref="H-InvDB:HIT000391154" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40012155" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: AAATCATA sequenced from the forward primer" gene <1..2166 /gene="PTGFRN" /gene_synonym="CD315" /gene_synonym="CD9P-1" /gene_synonym="EWI-F" /gene_synonym="FPRP" /gene_synonym="SMAP-6" /db_xref="GeneID:5738" /db_xref="HGNC:HGNC:9601" /db_xref="MIM:601204" CDS <1..1964 /gene="PTGFRN" /gene_synonym="CD315" /gene_synonym="CD9P-1" /gene_synonym="EWI-F" /gene_synonym="FPRP" /gene_synonym="SMAP-6" /codon_start=3 /product="PTGFRN protein" /protein_id="AAI39719.1" /db_xref="GeneID:5738" /db_xref="HGNC:HGNC:9601" /db_xref="MIM:601204" /translation="EESGAGARPRRRSADQGSYRCIVSEWIAEQGNWQEIQEKAVEVA TVVIQPTVLRAAVPKNVSVAEGKELDLTCNITTDRADDVRPEVTWSFSRMPDSTLPGS RVLARLDRDSLVHSSPHVALSHVDARSYHLLVRDVSKENSGYYYCHVSLWAPGHNRSW HKVAEAVSSPAGVGVTWLEPDYQVYLNASKVPGFADDPTELACRVVDTKSGEANVRFT VSWYYRMNRRSDNVVTSELLAVMDGDWTLKYGERSKQRAQDGDFIFSKEHTDTFNFRI QRTTEEDRGNYYCVVSAWTKQRNNSWVKSKDVFSKPVNIFWALEDSVLVVKARQPKPF FAAGNTFEMTCKVSSKNIKSPRYSVLIMAEKPVGDLSSPNETKYIISLDQDSVVKLEN WTDASRVDGVVLEKVQEDEFRYRMYQTQVSDAGLYRCMVTAWSPVRGSLWREAATSLS NPIEIDFQTSGPIFNASVHSDTPSVIRGDLIKLFCIITVEGAALDPDDMAFDVSWFAV HSFGLDKAPVLLSSLDRKGIVTTSRRDWKSDLSLERVSVLEFLLQVHGSEDQDFGNYY CSVTPWVKSPTGSWQKEAEIHSKPVFITVKMDVLNAFKYPLLIGVGLSTVIGLLSCLI GYCSSHWCCKKEVQETRRERRRLMSMEMD" BASE COUNT 502 a 538 c 639 g 487 t ORIGIN 1 gcgaggagag cggagcaggc gcgcggccca ggcggaggag cgccgaccag ggctcctaca 61 ggtgtatcgt cagcgagtgg atcgccgagc agggcaactg gcaggaaatc caagaaaagg 121 ccgtggaagt tgccaccgtg gtgatccagc cgacagttct gcgagcagct gtgcccaaga 181 atgtgtctgt ggctgaagga aaggaactgg acctgacctg taacatcaca acagaccgag 241 ccgatgacgt ccggcccgag gtgacgtggt ccttcagcag gatgcctgac agcaccctac 301 ctggctcccg cgtgttggcg cggcttgacc gtgattccct ggtgcacagc tcgcctcatg 361 ttgctttgag tcatgtggat gcacgctcct accatttact ggttcgggat gttagcaaag 421 aaaactctgg ctactattac tgccacgtgt ccctgtgggc acccggacac aacaggagct 481 ggcacaaagt ggcagaggcc gtgtcttccc cagctggtgt gggtgtgacc tggctagaac 541 cagactacca ggtgtacctg aatgcttcca aggtccccgg gtttgcggat gaccccacag 601 agctggcatg ccgggtggtg gacacgaaga gtggggaggc gaatgtccga ttcacggttt 661 cgtggtacta caggatgaac cggcgcagcg acaatgtggt gaccagcgag ctgcttgcag 721 tcatggacgg ggactggacg ctaaaatatg gagagaggag caagcagcgg gcccaggatg 781 gagactttat tttttctaag gaacatacag acacgttcaa tttccggatc caaaggacta 841 cagaggaaga cagaggcaat tattactgtg ttgtgtctgc ctggaccaaa cagcggaaca 901 acagctgggt gaaaagcaag gatgtcttct ccaagcctgt taacatattt tgggcattag 961 aagattccgt gcttgtggtg aaggcgaggc agccaaagcc tttctttgct gccggaaata 1021 catttgagat gacttgcaaa gtatcttcca agaatattaa gtcgccacgc tactctgttc 1081 tcatcatggc tgagaagcct gtcggcgacc tctccagtcc caatgaaacg aagtacatca 1141 tctctctgga ccaggattct gtggtgaagc tggagaattg gacagatgca tcacgggtgg 1201 atggcgttgt tttagaaaaa gtgcaggagg atgagttccg ctatcgaatg taccagactc 1261 aggtctcaga cgcagggctg taccgctgca tggtgacagc ctggtctcct gtcaggggca 1321 gcctttggcg agaagcagca accagtctct ccaatcctat tgagatagac ttccaaacct 1381 caggtcctat atttaatgct tctgtgcatt cagacacacc atcagtaatt cggggagatc 1441 tgatcaaatt gttctgtatc atcactgtcg agggagcagc actggatcca gatgacatgg 1501 cctttgatgt gtcctggttt gcggtgcact cttttggcct ggacaaggct cctgtgctcc 1561 tgtcttccct ggatcggaag ggcatcgtga ccacctcccg gagggactgg aagagcgacc 1621 tcagcctgga gcgcgtgagt gtgctggaat tcttgctgca agtgcatggc tccgaggacc 1681 aggactttgg caactactac tgttccgtga ctccatgggt gaagtcacca acaggttcct 1741 ggcagaagga ggcagagatc cactccaagc ccgtttttat aactgtgaag atggatgtgc 1801 tgaacgcctt caagtatccc ttgctgatcg gcgtcggtct gtccacggtc atcgggctcc 1861 tgtcctgtct catcgggtac tgcagctccc actggtgttg taagaaggag gttcaggaga 1921 cacggcgcga gcgccgcagg ctcatgtcga tggagatgga ctaggctggc ccgggagggg 1981 agtgacagag ggacgttcta ggagcaattg gggcaagaag aggacagtga tattttaaaa 2041 caaagtgtgt tacactaaaa accagtcctc tctaatctca ggtgggactt ggcgctctct 2101 cttttctgca tgtcaagttc tgagcgcgga catgtttacc agcacacggc tcttcttccc 2161 acggca //