LOCUS BC139718 2166 bp mRNA linear HUM 18-APR-2007
DEFINITION Homo sapiens prostaglandin F2 receptor negative regulator, mRNA
(cDNA clone IMAGE:40012155), partial cds.
ACCESSION BC139718
VERSION BC139718.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2166)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2166)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 18 Row: h Column: 10.
FEATURES Location/Qualifiers
source 1..2166
/db_xref="H-InvDB:HIT000391154"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40012155"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: AAATCATA sequenced from
the forward primer"
gene <1..2166
/gene="PTGFRN"
/gene_synonym="CD315"
/gene_synonym="CD9P-1"
/gene_synonym="EWI-F"
/gene_synonym="FPRP"
/gene_synonym="SMAP-6"
/db_xref="GeneID:5738"
/db_xref="HGNC:HGNC:9601"
/db_xref="MIM:601204"
CDS <1..1964
/gene="PTGFRN"
/gene_synonym="CD315"
/gene_synonym="CD9P-1"
/gene_synonym="EWI-F"
/gene_synonym="FPRP"
/gene_synonym="SMAP-6"
/codon_start=3
/product="PTGFRN protein"
/protein_id="AAI39719.1"
/db_xref="GeneID:5738"
/db_xref="HGNC:HGNC:9601"
/db_xref="MIM:601204"
/translation="EESGAGARPRRRSADQGSYRCIVSEWIAEQGNWQEIQEKAVEVA
TVVIQPTVLRAAVPKNVSVAEGKELDLTCNITTDRADDVRPEVTWSFSRMPDSTLPGS
RVLARLDRDSLVHSSPHVALSHVDARSYHLLVRDVSKENSGYYYCHVSLWAPGHNRSW
HKVAEAVSSPAGVGVTWLEPDYQVYLNASKVPGFADDPTELACRVVDTKSGEANVRFT
VSWYYRMNRRSDNVVTSELLAVMDGDWTLKYGERSKQRAQDGDFIFSKEHTDTFNFRI
QRTTEEDRGNYYCVVSAWTKQRNNSWVKSKDVFSKPVNIFWALEDSVLVVKARQPKPF
FAAGNTFEMTCKVSSKNIKSPRYSVLIMAEKPVGDLSSPNETKYIISLDQDSVVKLEN
WTDASRVDGVVLEKVQEDEFRYRMYQTQVSDAGLYRCMVTAWSPVRGSLWREAATSLS
NPIEIDFQTSGPIFNASVHSDTPSVIRGDLIKLFCIITVEGAALDPDDMAFDVSWFAV
HSFGLDKAPVLLSSLDRKGIVTTSRRDWKSDLSLERVSVLEFLLQVHGSEDQDFGNYY
CSVTPWVKSPTGSWQKEAEIHSKPVFITVKMDVLNAFKYPLLIGVGLSTVIGLLSCLI
GYCSSHWCCKKEVQETRRERRRLMSMEMD"
BASE COUNT 502 a 538 c 639 g 487 t
ORIGIN
1 gcgaggagag cggagcaggc gcgcggccca ggcggaggag cgccgaccag ggctcctaca
61 ggtgtatcgt cagcgagtgg atcgccgagc agggcaactg gcaggaaatc caagaaaagg
121 ccgtggaagt tgccaccgtg gtgatccagc cgacagttct gcgagcagct gtgcccaaga
181 atgtgtctgt ggctgaagga aaggaactgg acctgacctg taacatcaca acagaccgag
241 ccgatgacgt ccggcccgag gtgacgtggt ccttcagcag gatgcctgac agcaccctac
301 ctggctcccg cgtgttggcg cggcttgacc gtgattccct ggtgcacagc tcgcctcatg
361 ttgctttgag tcatgtggat gcacgctcct accatttact ggttcgggat gttagcaaag
421 aaaactctgg ctactattac tgccacgtgt ccctgtgggc acccggacac aacaggagct
481 ggcacaaagt ggcagaggcc gtgtcttccc cagctggtgt gggtgtgacc tggctagaac
541 cagactacca ggtgtacctg aatgcttcca aggtccccgg gtttgcggat gaccccacag
601 agctggcatg ccgggtggtg gacacgaaga gtggggaggc gaatgtccga ttcacggttt
661 cgtggtacta caggatgaac cggcgcagcg acaatgtggt gaccagcgag ctgcttgcag
721 tcatggacgg ggactggacg ctaaaatatg gagagaggag caagcagcgg gcccaggatg
781 gagactttat tttttctaag gaacatacag acacgttcaa tttccggatc caaaggacta
841 cagaggaaga cagaggcaat tattactgtg ttgtgtctgc ctggaccaaa cagcggaaca
901 acagctgggt gaaaagcaag gatgtcttct ccaagcctgt taacatattt tgggcattag
961 aagattccgt gcttgtggtg aaggcgaggc agccaaagcc tttctttgct gccggaaata
1021 catttgagat gacttgcaaa gtatcttcca agaatattaa gtcgccacgc tactctgttc
1081 tcatcatggc tgagaagcct gtcggcgacc tctccagtcc caatgaaacg aagtacatca
1141 tctctctgga ccaggattct gtggtgaagc tggagaattg gacagatgca tcacgggtgg
1201 atggcgttgt tttagaaaaa gtgcaggagg atgagttccg ctatcgaatg taccagactc
1261 aggtctcaga cgcagggctg taccgctgca tggtgacagc ctggtctcct gtcaggggca
1321 gcctttggcg agaagcagca accagtctct ccaatcctat tgagatagac ttccaaacct
1381 caggtcctat atttaatgct tctgtgcatt cagacacacc atcagtaatt cggggagatc
1441 tgatcaaatt gttctgtatc atcactgtcg agggagcagc actggatcca gatgacatgg
1501 cctttgatgt gtcctggttt gcggtgcact cttttggcct ggacaaggct cctgtgctcc
1561 tgtcttccct ggatcggaag ggcatcgtga ccacctcccg gagggactgg aagagcgacc
1621 tcagcctgga gcgcgtgagt gtgctggaat tcttgctgca agtgcatggc tccgaggacc
1681 aggactttgg caactactac tgttccgtga ctccatgggt gaagtcacca acaggttcct
1741 ggcagaagga ggcagagatc cactccaagc ccgtttttat aactgtgaag atggatgtgc
1801 tgaacgcctt caagtatccc ttgctgatcg gcgtcggtct gtccacggtc atcgggctcc
1861 tgtcctgtct catcgggtac tgcagctccc actggtgttg taagaaggag gttcaggaga
1921 cacggcgcga gcgccgcagg ctcatgtcga tggagatgga ctaggctggc ccgggagggg
1981 agtgacagag ggacgttcta ggagcaattg gggcaagaag aggacagtga tattttaaaa
2041 caaagtgtgt tacactaaaa accagtcctc tctaatctca ggtgggactt ggcgctctct
2101 cttttctgca tgtcaagttc tgagcgcgga catgtttacc agcacacggc tcttcttccc
2161 acggca
//