LOCUS BC137553 1407 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens cytokine-dependent hematopoietic cell linker, mRNA
(cDNA clone MGC:169176 IMAGE:9021553), complete cds.
ACCESSION BC137553
VERSION BC137553.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1407)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1407)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: g Column: 23
single stranded.
FEATURES Location/Qualifiers
source 1..1407
/db_xref="H-InvDB:HIT000501442"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:169176 IMAGE:9021553"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TTTCGGTG"
gene 1..1407
/gene="CLNK"
/gene_synonym="MIST"
/db_xref="GeneID:116449"
/db_xref="HGNC:HGNC:17438"
/db_xref="MIM:611434"
CDS 67..1353
/gene="CLNK"
/gene_synonym="MIST"
/codon_start=1
/product="cytokine-dependent hematopoietic cell linker"
/protein_id="AAI37554.1"
/db_xref="GeneID:116449"
/db_xref="HGNC:HGNC:17438"
/db_xref="MIM:611434"
/translation="MNRQGNRKTTKEGSNDLKFQNFSLPKNRSWPRINSATGQYQRMN
KPLLDWERNFAAVLDGAKGHSDDDYDDPELRMEETWQSIKILPARPIKESEYADTHYF
KVAMDTPLPLDTRTSISIGQPTWNTQTRLERVDKPISKDVRSQNIKGDASVRKNKIPL
PPPRPLITLPKKYQPLPPEPESSRPPLSQRHTFPEVQRMPSQISLRDLSEVLEAEKVP
HNQRKPESTHLLENQNTQEIPLAISSSSFTTSNHSVQNRDHRGGMQPCSPQRCQPPAS
CSPHENILPYKYTSWRPPFPKRSDRKDVQHNEWYIGEYSRQAVEEAFMKENKDGSFLV
RDCSTKSKEEPYVLAVFYENKVYNVKIRFLERNQQFALGTGLRGDEKFDSVEDIIEHY
KNFPIILIDGKDKTGVHRKQCHLTQPLPLTRHLLPL"
BASE COUNT 440 a 349 c 311 g 307 t
ORIGIN
1 cttggtgctc tccacgctgt tcaggctgaa ttgaagagcc ctcttacccg ccaggtgcca
61 agaactatga acaggcaggg caatagaaag acaactaaag aaggatccaa cgatttgaaa
121 ttccagaact tcagtctgcc aaaaaacagg tcatggcctc gcatcaatag tgccacaggc
181 cagtaccaga ggatgaacaa gcctcttcta gactgggaaa gaaactttgc tgcagtcctg
241 gatggagcaa aaggccacag tgatgatgac tatgatgacc ctgagcttcg gatggaagag
301 acatggcagt cgattaaaat tttaccagcc cggcctataa aggaatctga atatgcagat
361 acacactatt tcaaggttgc aatggacact ccccttccgt tagacaccag gacctctatc
421 tccattggac agccgacctg gaacacacag acgaggttgg aaagagtgga caaacccatt
481 tccaaggacg tcagaagcca aaacattaaa ggagatgcat ccgtaagaaa gaacaagatt
541 cctttaccac ctcctcggcc tctcataaca cttccgaaga agtaccaacc cttgccccct
601 gagccggaga gcagcaggcc acctttatct cagagacaca cctttccaga agtccagaga
661 atgcccagtc agataagctt aagggactta agtgaggtcc ttgaagcaga aaaagttcct
721 cataaccaga ggaagcctga atcaactcat ctgttagaaa accaaaatac tcaagagatt
781 ccacttgcca ttagcagttc ttcattcacg acaagcaacc acagtgtgca aaacagagat
841 catagaggag gcatgcagcc ctgttctcct cagagatgcc agcctccagc cagctgcagc
901 cctcacgaaa atatactgcc ctataaatac acaagctgga gaccaccttt ccccaaaagg
961 tctgacagaa aggatgtcca gcacaatgaa tggtacattg gagaatacag ccgccaggca
1021 gtggaagagg cattcatgaa ggagaacaag gatggtagtt tcttggtccg agattgttcc
1081 acaaaatcca aggaagagcc ctatgttttg gctgtgtttt atgagaacaa agtctacaat
1141 gtaaaaatcc gcttcctgga gaggaatcag cagtttgccc tggggacagg actcagagga
1201 gatgagaagt ttgattcagt agaagacatc atcgaacact acaagaattt tcccattata
1261 ctaattgatg ggaaagataa aactggggtc cacaggaaac agtgtcacct cactcagcca
1321 ctccctctca ccagacacct cttgcctctg tagcctggtc tttgtgttat ctttggttta
1381 ctggattcag cgcttccatt gttttca
//