LOCUS       BC137540                1506 bp    mRNA    linear   HUM 12-MAY-2008
DEFINITION  Homo sapiens hepatocyte nuclear factor 4, alpha, mRNA (cDNA clone
            MGC:169163 IMAGE:9021540), complete cds.
ACCESSION   BC137540
VERSION     BC137540.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1506)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1506)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: LLDM Plate: 673 Row: g Column: 10.
FEATURES             Location/Qualifiers
     source          1..1506
                     /db_xref="H-InvDB:HIT000501430"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:169163 IMAGE:9021540"
                     /tissue_type="Pooled, cerebellum, kidney, placenta,
                     testis, lung, colon, liver, heart, thyroid, bladder,
                     uterus, PCR rescued clones"
                     /clone_lib="NIH_MGC_362"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: CTATATGT"
     gene            1..1506
                     /gene="HNF4A"
                     /gene_synonym="HNF4"
                     /gene_synonym="HNF4a7"
                     /gene_synonym="HNF4a8"
                     /gene_synonym="HNF4a9"
                     /gene_synonym="NR2A1"
                     /gene_synonym="NR2A21"
                     /gene_synonym="TCF"
                     /db_xref="GeneID:3172"
                     /db_xref="HGNC:HGNC:5024"
                     /db_xref="MIM:600281"
     CDS             40..1293
                     /gene="HNF4A"
                     /gene_synonym="HNF4"
                     /gene_synonym="HNF4a7"
                     /gene_synonym="HNF4a8"
                     /gene_synonym="HNF4a9"
                     /gene_synonym="NR2A1"
                     /gene_synonym="NR2A21"
                     /gene_synonym="TCF"
                     /codon_start=1
                     /product="hepatocyte nuclear factor 4, alpha"
                     /protein_id="AAI37541.1"
                     /db_xref="GeneID:3172"
                     /db_xref="HGNC:HGNC:5024"
                     /db_xref="MIM:600281"
                     /translation="MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSE
                     GTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQC
                     VVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEV
                     LSRQITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVA
                     LLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPF
                     QELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRF
                     GELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGPCQAQEGRGWSGDSP
                     GDRPHTVSSPLSSLASPLCRFGQVA"
BASE COUNT          327 a          424 c          457 g          298 t
ORIGIN      
        1 cagggtaggg caggtggccg cggcgtggag gcagggagaa tgcgactctc caaaaccctc
       61 gtcgacatgg acatggccga ctacagtgct gcactggacc cagcctacac caccctggaa
      121 tttgagaatg tgcaggtgtt gacgatgggc aatgacacgt ccccatcaga aggcaccaac
      181 ctcaacgcgc ccaacagcct gggtgtcagc gccctgtgtg ccatctgcgg ggaccgggcc
      241 acgggcaaac actacggtgc ctcgagctgt gacggctgca agggcttctt ccggaggagc
      301 gtgcggaaga accacatgta ctcctgcaga tttagccggc agtgcgtggt ggacaaagac
      361 aagaggaacc agtgccgcta ctgcaggctc aagaaatgct tccgggctgg catgaagaag
      421 gaagccgtcc agaatgagcg ggaccggatc agcactcgaa ggtcaagcta tgaggacagc
      481 agcctgccct ccatcaatgc gctcctgcag gcggaggtcc tgtcccgaca gatcacctcc
      541 cccgtctccg ggatcaacgg cgacattcgg gcgaagaaga ttgccagcat cgcagatgtg
      601 tgtgagtcca tgaaggagca gctgctggtt ctcgttgagt gggccaagta catcccagct
      661 ttctgcgagc tccccctgga cgaccaggtg gccctgctca gagcccatgc tggcgagcac
      721 ctgctgctcg gagccaccaa gagatccatg gtgttcaagg acgtgctgct cctaggcaat
      781 gactacattg tccctcggca ctgcccggag ctggcggaga tgagccgggt gtccatacgc
      841 atccttgacg agctggtgct gcccttccag gagctgcaga tcgatgacaa tgagtatgcc
      901 tacctcaaag ccatcatctt ctttgaccca gatgccaagg ggctgagcga tccagggaag
      961 atcaagcggc tgcgttccca ggtgcaggtg agcttggagg actacatcaa cgaccgccag
     1021 tatgactcgc gtggccgctt tggagagctg ctgctgctgc tgcccacctt gcagagcatc
     1081 acctggcaga tgatcgagca gatccagttc atcaagctct tcggcatggc caagattgac
     1141 aacctgttgc aggagatgct gctgggaggt ccgtgccaag cccaggaggg gcggggttgg
     1201 agtggggact ccccaggaga caggcctcac acagtgagct cacccctcag ctccttggct
     1261 tccccactgt gccgctttgg gcaagttgct taacctgtct gtgcctcagt ttcctcacca
     1321 gaaaaatggg aacaaggcaa tggtctattt gttcaggcac cgagaaccta gcacgtgcca
     1381 gtcactgttc taagtgctgg caattcagca aagaacaaga tctttgccct cggggaggct
     1441 gtgtgtgtgt gagtatgtat ggatgcgtgg atatctgtgt atatgcccgt atgtgcgtgc
     1501 atgtgt
//