LOCUS BC137528 2289 bp mRNA linear HUM 16-AUG-2008
DEFINITION Homo sapiens chromosome X open reading frame 36, mRNA (cDNA clone
IMAGE:9021528), complete cds.
ACCESSION BC137528
VERSION BC137528.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2289)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2289)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: f Column: 22
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2289
/db_xref="H-InvDB:HIT000501418"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9021528"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TTGCACAG"
gene 1..2289
/gene="CXorf36"
/gene_synonym="4930578C19Rik"
/gene_synonym="bA435K1.1"
/gene_synonym="EPQL1862"
/gene_synonym="PRO3743"
/db_xref="GeneID:79742"
/db_xref="HGNC:HGNC:25866"
CDS 64..612
/gene="CXorf36"
/gene_synonym="4930578C19Rik"
/gene_synonym="bA435K1.1"
/gene_synonym="EPQL1862"
/gene_synonym="PRO3743"
/codon_start=1
/product="chromosome X open reading frame 36"
/protein_id="AAI37529.1"
/db_xref="GeneID:79742"
/db_xref="HGNC:HGNC:25866"
/translation="MEPQLGPEAAALRPGWLALLLWVSALSCSFSLPASSLSSLVPQV
RTSYNFGRTFLGLDKCNACIGTSICKKFFKEEIRSDNWLASHLGLPPDSLLSYPANYS
DDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERVLRKTERFQKWLQAKRL
TPDLVQDCHQGQRELKFLCMLR"
BASE COUNT 626 a 549 c 499 g 615 t
ORIGIN
1 gccctgcctc tgtacagcct cgagtggaca gccagaggct gcagctggag cccagagccc
61 aagatggagc cccagctggg gcctgaggct gccgccctcc gccctggctg gctggccctg
121 ctgctgtggg tctcagccct gagctgttct ttctccttgc cagcttcttc cctttcttct
181 ctggtgcccc aagtcagaac cagctacaat tttggaagga ctttcctcgg tcttgataaa
241 tgcaatgcct gcatcgggac atctatttgc aagaagttct ttaaagaaga aataagatct
301 gacaactggc tggcttccca ccttggactg cctcccgatt ccttgctttc ttatcctgca
361 aattactcag atgattccaa aatctggcgc cctgtggaga tctttagact ggtcagcaaa
421 tatcaaaacg agatctcaga caggaaaatc tgtgcctctg catcagcccc aaagacctgc
481 agcattgagc gtgtcctgcg gaaaacagag aggttccaga aatggctgca ggccaagcgc
541 ctcacgccgg acctggtgca ggactgtcac cagggccaga gagaactaaa gttcctgtgt
601 atgctgagat aacaccagtg aaaaagcctg gcatggagcc cagcactgag aacttccaga
661 aagtgttagc cttctcccaa ctgtgttata ccaaccacat tttcaaatag taatcattaa
721 agaggcttct gcatcaaacc ttcacatgca gctcccatgc caccctccag aattcaccaa
781 cacacaggcc caccagcaac aggctacctt tgcacaatat tctctgatga caactccaaa
841 gccccggctc tttccaccac actgtggtcc cctagatggg gctgttgctg agcccacccc
901 aatccagatg tgatccccct gtgatctact tctggcaaga ttctcagtct ggacaggtct
961 tccctatgag atagaacctg ataaggagct agggcaattc tgacaacatt accaaaggcc
1021 cacataactt ctaaattttg gtctggtctg aaggaaaacc tgttcttgcc ctagtgatgg
1081 atgaactctc ttatctctgg cttctagagg gaaaaaaaag catacctctt ttacttttta
1141 agtacctcca tcagagtcat gaaatcacct gtcaagacta tctatctttt atgtttccat
1201 tctggtaaga actctttaaa tgaggacact gctgattgct ggtgatgttt tttgagcaaa
1261 cactcggggg tatggatgaa agccaatcgc aggtcaaatg actccttggg gaagctactt
1321 ctcctctatt cagatttcac taaaatcttc caagatgaaa gcaaatctag atttcggtct
1381 tcattgctgt ccatttttgt aatgaacgag tgtttttcct ttagctagtg tatcaggcag
1441 ggttctacca gagaaacaga accagtagga gatacatata catgtccaga tttatttcaa
1501 agaattgatt tacatgattg tggggattgg caagtccaaa atccatatgg taggcctgca
1561 atctgtaaac ctttgggcag gagctgatgc tgtagtttgc agatagaatt ccttgttcct
1621 taaaaaaatc tgtttttgtt cttaagggct ttgaatgatt ggatcaggcc cacccagatt
1681 acctagataa tctcttttac ttaaagtaaa ctgattgtag gtgctaatca catctatgaa
1741 atgccttcac agcaacacct agattagcat tcaattgaat aactggggaa tacagcctag
1801 ccaagttgac acataaaatt aaccatcaca gcaacatgcc tgctaaattt tatcgaccgt
1861 cttcagactg ttaaggattg tggtagagaa ctgtgacagc cactctcagc atcaccctga
1921 accaaaggcc cctatcaagt aacaatatag ccaagcaaaa ttccagtcaa tagagacatt
1981 gactggttgg ctggcttccc aagggatagc accagacaag aaatgcaagg atgaggaaac
2041 caggcacggg agagagaggg gcaacagagg tccagggttt ggttatcttt ttatttttca
2101 ctgggaggtg gtaagttagc cctgttgccc atgtatgcag atgggagaag tgatttagaa
2161 actccaaagc aattggtaat ccccaaaatg ggtgtatctg gtttgaaatg aaaccttatt
2221 ttattggaaa tggttggttt cccaattctg tttgccattg gccaatataa ttgtgggttt
2281 gcacatggc
//