LOCUS BC137506 1176 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens mucosal vascular addressin cell adhesion molecule 1, mRNA (cDNA clone MGC:169129 IMAGE:9021506), complete cds. ACCESSION BC137506 VERSION BC137506.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1176) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1176) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 673 Row: e Column: 24. FEATURES Location/Qualifiers source 1..1176 /db_xref="H-InvDB:HIT000501399" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:169129 IMAGE:9021506" /tissue_type="Brain, cerebral cortex, PCR rescued clones" /clone_lib="NIH_MGC_287" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCTCGTAG" gene 1..1176 /gene="MADCAM1" /gene_synonym="MACAM1" /db_xref="GeneID:8174" /db_xref="HGNC:HGNC:6765" /db_xref="MIM:102670" CDS 47..934 /gene="MADCAM1" /gene_synonym="MACAM1" /codon_start=1 /product="mucosal vascular addressin cell adhesion molecule 1" /protein_id="AAI37507.1" /db_xref="GeneID:8174" /db_xref="HGNC:HGNC:6765" /db_xref="MIM:102670" /translation="MDFGLALLLAGLLGLLLGQSLQVKPLQVEPPEPVVAVALGASRQ LTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT FQHTVQLLVYAFPDQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEG AQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHR QAIPASKPAGDQLPAALWTSSAVLGLLLLALPTYHLWKRCRHLAEDDTHPPASLRLLP QVSAWAGLRGTGQVGISPS" BASE COUNT 176 a 415 c 378 g 207 t ORIGIN 1 ctatttaagc ggcttccccg cggcctcggg acagagggga ctgagcatgg atttcggact 61 ggccctcctg ctggcggggc ttctggggct cctcctcggc cagtccctcc aggtgaagcc 121 cctgcaggtg gagcccccgg agccggtggt ggccgtggcc ttgggcgcct cgcgccagct 181 cacctgccgc ctggcctgcg cggaccgcgg ggcctcggtg cagtggcggg gcctggacac 241 cagcctgggc gcggtgcagt cggacacggg ccgcagcgtc ctcaccgtgc gcaacgcctc 301 gctgtcggcg gccgggaccc gcgtgtgcgt gggctcctgc gggggccgca ccttccagca 361 caccgtgcag ctccttgtgt acgccttccc ggaccagctg accgtctccc cggcagccct 421 ggtgcctggt gacccggagg tggcctgtac ggcccacaaa gtcacgcccg tggaccccaa 481 cgcgctctcc ttctccctgc tcgtcggggg ccaggaactg gagggggcgc aagccctggg 541 cccggaggtg caggaggagg aggaggagcc ccagggggac gaggacgtgc tgttcagggt 601 gacagagcgc tggcggctgc cgcccctggg gacccctgtc ccgcccgccc tctactgcca 661 ggccacgatg aggctgcctg gcttggagct cagccaccgc caggccatcc ccgcgtccaa 721 acctgcgggt gaccagctgc ccgcggctct gtggaccagc agtgcggtgc tgggactgct 781 gctcctggcc ttgcccacct atcacctctg gaaacgctgc cggcacctgg ctgaggacga 841 cacccaccca ccagcttctc tgaggcttct gccccaggtg tcggcctggg ctgggttaag 901 ggggaccggc caggtcggga tcagcccctc ctgagtggcc agcctttccc cctgtgaaag 961 caaaatagct tggacccctt caagttgaga actggtcagg gcaaacctgc ctcccattct 1021 actcaaagtc atccctctgt tcacagagat ggatgcatgt tctgattgcc tctttggaga 1081 agctcatcag aaactcaaaa gaaggccact gtttgtctca cctacccatg acctgaagcc 1141 cctccctgag tggtccccac ctttctggac ggaacc //