LOCUS       BC137506                1176 bp    mRNA    linear   HUM 12-MAY-2008
DEFINITION  Homo sapiens mucosal vascular addressin cell adhesion molecule 1,
            mRNA (cDNA clone MGC:169129 IMAGE:9021506), complete cds.
ACCESSION   BC137506
VERSION     BC137506.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1176)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1176)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: LLDM Plate: 673 Row: e Column: 24.
FEATURES             Location/Qualifiers
     source          1..1176
                     /db_xref="H-InvDB:HIT000501399"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:169129 IMAGE:9021506"
                     /tissue_type="Brain, cerebral cortex, PCR rescued clones"
                     /clone_lib="NIH_MGC_287"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: CCTCGTAG"
     gene            1..1176
                     /gene="MADCAM1"
                     /gene_synonym="MACAM1"
                     /db_xref="GeneID:8174"
                     /db_xref="HGNC:HGNC:6765"
                     /db_xref="MIM:102670"
     CDS             47..934
                     /gene="MADCAM1"
                     /gene_synonym="MACAM1"
                     /codon_start=1
                     /product="mucosal vascular addressin cell adhesion
                     molecule 1"
                     /protein_id="AAI37507.1"
                     /db_xref="GeneID:8174"
                     /db_xref="HGNC:HGNC:6765"
                     /db_xref="MIM:102670"
                     /translation="MDFGLALLLAGLLGLLLGQSLQVKPLQVEPPEPVVAVALGASRQ
                     LTCRLACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRT
                     FQHTVQLLVYAFPDQLTVSPAALVPGDPEVACTAHKVTPVDPNALSFSLLVGGQELEG
                     AQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRLPGLELSHR
                     QAIPASKPAGDQLPAALWTSSAVLGLLLLALPTYHLWKRCRHLAEDDTHPPASLRLLP
                     QVSAWAGLRGTGQVGISPS"
BASE COUNT          176 a          415 c          378 g          207 t
ORIGIN      
        1 ctatttaagc ggcttccccg cggcctcggg acagagggga ctgagcatgg atttcggact
       61 ggccctcctg ctggcggggc ttctggggct cctcctcggc cagtccctcc aggtgaagcc
      121 cctgcaggtg gagcccccgg agccggtggt ggccgtggcc ttgggcgcct cgcgccagct
      181 cacctgccgc ctggcctgcg cggaccgcgg ggcctcggtg cagtggcggg gcctggacac
      241 cagcctgggc gcggtgcagt cggacacggg ccgcagcgtc ctcaccgtgc gcaacgcctc
      301 gctgtcggcg gccgggaccc gcgtgtgcgt gggctcctgc gggggccgca ccttccagca
      361 caccgtgcag ctccttgtgt acgccttccc ggaccagctg accgtctccc cggcagccct
      421 ggtgcctggt gacccggagg tggcctgtac ggcccacaaa gtcacgcccg tggaccccaa
      481 cgcgctctcc ttctccctgc tcgtcggggg ccaggaactg gagggggcgc aagccctggg
      541 cccggaggtg caggaggagg aggaggagcc ccagggggac gaggacgtgc tgttcagggt
      601 gacagagcgc tggcggctgc cgcccctggg gacccctgtc ccgcccgccc tctactgcca
      661 ggccacgatg aggctgcctg gcttggagct cagccaccgc caggccatcc ccgcgtccaa
      721 acctgcgggt gaccagctgc ccgcggctct gtggaccagc agtgcggtgc tgggactgct
      781 gctcctggcc ttgcccacct atcacctctg gaaacgctgc cggcacctgg ctgaggacga
      841 cacccaccca ccagcttctc tgaggcttct gccccaggtg tcggcctggg ctgggttaag
      901 ggggaccggc caggtcggga tcagcccctc ctgagtggcc agcctttccc cctgtgaaag
      961 caaaatagct tggacccctt caagttgaga actggtcagg gcaaacctgc ctcccattct
     1021 actcaaagtc atccctctgt tcacagagat ggatgcatgt tctgattgcc tctttggaga
     1081 agctcatcag aaactcaaaa gaaggccact gtttgtctca cctacccatg acctgaagcc
     1141 cctccctgag tggtccccac ctttctggac ggaacc
//