LOCUS BC137488 5664 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens pleckstrin homology domain interacting protein, mRNA
(cDNA clone MGC:169111 IMAGE:9021488), complete cds.
ACCESSION BC137488
VERSION BC137488.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5664)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5664)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: e Column: 6.
FEATURES Location/Qualifiers
source 1..5664
/db_xref="H-InvDB:HIT000501382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:169111 IMAGE:9021488"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GGAGTTTT"
gene 1..5664
/gene="PHIP"
/gene_synonym="ndrp"
/db_xref="GeneID:55023"
/db_xref="HGNC:HGNC:15673"
CDS 107..5572
/gene="PHIP"
/gene_synonym="ndrp"
/codon_start=1
/product="pleckstrin homology domain interacting protein"
/protein_id="AAI37489.1"
/db_xref="GeneID:55023"
/db_xref="HGNC:HGNC:15673"
/translation="MSCERKGLSELRSELYFLIARFLEDGPCQQAAQVLIREVAEKEL
LPRRTDWTGKEHPRTYQNLVKYYRHLAPDHLLQICHRLGPLLEQEIPQSVPGVQTLLG
AGRQSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADTLFSRKLNGKYR
LERLVPTAVYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLL
ATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFS
PLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFSAGGM
FLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIW
QFKRREWKSILLDMATRPAGQNLQGIEDKITKMKVTMVAWDRHDNTVITAVNNMTLKV
WNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNM
IEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLI
RDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPSRYQRLVPGRENCREEQLIPQMGVT
SSGLNQVLSQQANQEISPLDSMIQRLQQEQDLRRSGEAGISNTSRLSRGSISSTSEVH
SPPNVGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSRRVVVPELSAGVASRQEEWR
TAKGEEEIKTYRSEEKRKHLTVPKENKIPTVSKNHAHEHFLDLGESKKQQTNQHNYRT
RSALEETPRPSEEIENGSSSSDEGEVVAVSGGTSEEEERAWHSDGSSSDYSSDYSDWT
ADAGINLQPPKKVPKNKIKKAESSSDEEEESEKQKQKQIKKEKKKVNEEKDGPISPKK
KKPKERKQKRLAVGELTENGLTLEEWLPSTWITDTIPRRCPFVPQMGDEVYYFRQGHE
AYVEMARKNKIYSINPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFLDPDT
GKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDDAWWFGTIESQ
EPLQLEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDGECRS
LIYKPLDGEWGTNPRDEECERIVAGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPT
DLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKD
QTCYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTRKRKDHQPRRRLRNRAQSYDIQA
WKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESP
MELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNT
ITKRRKKRNRSSSVSSSAASSPERKKRILKPQLKSESSTSAFSTPTRSIPPRHNAAQI
NGKTESSSVVRTRSNRVVVDPVVTEQPSTSSAAKTFITKANASAIPGKTILENSVKHS
KALNTLSSPGQSSFSHGTRNNSAKENMEKEKPVKRKMKSSVLPKASTLSKSSAVIEQG
DCKNNALVPGTIQVNGHGGQPSKLVKRGPGRKPKVEVNTNSGEIIHKKRGRKPKKLQY
AKPEDLEQNNVHPIRDEVLPSSTCNFLSETNNVKEDLLQKKNRGGRKPKRKMKTQKLD
ADLLVPASVKVLRRSNRKKIDDPIDEEEEFEELKGSEPHMRTRNQGRRTAFYNEDDSE
EEQRQLLFEDTSLTFGTSSRGRVRKLTEKAKANLIGW"
BASE COUNT 1861 a 1100 c 1287 g 1416 t
ORIGIN
1 cggctcgtga acacacactg acagctatag ggcaggcggc ggcaccgtcc ccgcttcccc
61 tcggcggcgg ggtgtcccgt cggcggccct gaagtgaccc ataaacatgt cttgtgagag
121 gaaaggcctc tcggagctgc gatcggagct ctacttcctc atcgcccggt tcctggaaga
181 tggaccctgt cagcaggcgg ctcaggtgct gatccgcgag gtggccgaga aggagctgct
241 gccccggcgc accgactgga ccgggaagga gcatcccagg acctaccaga atctggtgaa
301 gtattacaga cacttagcac ctgatcactt gctgcaaata tgtcatcgac taggacctct
361 tcttgaacaa gaaattcctc aaagtgttcc tggagtacaa actttattag gagctggaag
421 acagtcttta ctacgcacaa ataaaagctg caagcatgtt gtgtggaaag gatctgctct
481 ggctgcgttg cactgtggaa gaccacctga gtcaccagtt aactatggta gcccacccag
541 cattgcggat actctgtttt caaggaagct gaatgggaaa tacagacttg agcgacttgt
601 tccaactgca gtgtatcagc acatgaaaat gcataaacga attcttggac acttgtcatc
661 tgtgtactgt gtaacttttg atcgaactgg cagacggata tttactggtt ctgatgactg
721 tcttgtgaaa atatgggcaa cagatgatgg gaggttgtta gctaccttaa gaggacatgc
781 tgctgaaata tcagacatgg ctgtaaacta tgagaatacc atgatagcag ctggaagttg
841 tgataaaatg atccgagtct ggtgtcttcg aacctgtgca cctttggctg ttcttcaggg
901 ccatagtgca tctattacat cactacagtt ctcaccattg tgcagtggct caaagagata
961 tctatcttct actggggcag atggcactat ttgtttttgg ctctgggatg ctggaaccct
1021 taaaataaac ccaagacctg caaaatttac agagcgccct cggcctggag ttcaaatgat
1081 ctgttcttct tttagtgctg gtggaatgtt tctggcgacg ggaagcacag atcatattat
1141 tcgggtttat ttttttggat caggtcagcc agagaaaata tcagaattgg agtttcatac
1201 tgacaaagtt gacagtatcc agttttccaa cactagtaac aggtttgtaa gtggcagtcg
1261 tgatgggaca gcacgtattt ggcaatttaa acgaagagag tggaagagca ttttgttgga
1321 tatggctact cgtccagcag gccaaaacct tcaaggaata gaagataaaa tcacaaaaat
1381 gaaggttact atggtagctt gggatcgaca tgacaataca gttataactg cagttaataa
1441 catgactctg aaagtttgga attcttacac tggtcaacta attcatgtcc tgatgggtca
1501 tgaagatgag gtatttgttc ttgaaccaca cccgttcgat cctagagttc tcttttctgc
1561 tggtcatgat ggaaacgtga tagtgtggga tctggcaaga ggagtcaaaa tacgatctta
1621 tttcaatatg attgaaggcc aaggacatgg cgcagtattt gactgcaaat gctctcctga
1681 tggtcagcat tttgcatgca cagactctca tggacatctt ttaatttttg gctttgggtc
1741 cagtagcaaa tatgacaaga tagcagatca gatgttcttt catagtgatt atcggccact
1801 tattcgtgat gccaacaatt ttgtattaga tgaacagact cagcaagcac ctcatcttat
1861 gcctccccct tttttggttg atgttgatgg taaccctcat ccatcaagat atcaaagatt
1921 agttcctggc cgtgaaaatt gcagggagga gcaactcatc cctcagatgg gagtaacttc
1981 ctcaggactg aatcaagttt taagtcagca agcaaaccag gagatcagcc cactggacag
2041 catgattcaa agactacaac aggagcaaga cctgagacgt tctggtgaag caggtatcag
2101 taataccagc cgtttaagta gaggctccat aagttctacc tcagaggttc attcaccacc
2161 aaacgtagga ctaagacgta gtggacaaat tgaaggtgta cggcaaatgc acagcaacgc
2221 accaagaagt gaaatagcca cagagcggga tctggtagct tggagtcgaa gggtggtagt
2281 acccgagcta tcagctggtg tagccagtag gcaagaagaa tggagaactg caaagggaga
2341 agaagaaata aagacttaca ggtcagaaga gaaaagaaaa cacttaactg ttccaaaaga
2401 gaataaaata cccactgtct caaagaatca tgctcatgag catttcctgg atcttggaga
2461 atccaaaaag caacagacaa atcaacacaa ttatcgtaca agatctgcat tggaagagac
2521 tcctagaccc tcagaagaga tagaaaatgg cagtagttct tcagatgaag gcgaagtagt
2581 tgctgtcagt ggtggaacat ccgaagaaga agagagagca tggcacagtg atggcagttc
2641 tagtgactac tccagtgatt actctgactg gacagcagat gcaggaatta atctgcagcc
2701 accaaagaaa gttcctaaga ataaaatcaa gaaagcagaa agcagttcag atgaagaaga
2761 agaatctgaa aaacagaagc aaaaacagat taaaaaggaa aagaaaaaag taaatgaaga
2821 aaaagatgga ccaatatcac caaagaaaaa gaagcccaaa gaaagaaaac aaaagagatt
2881 ggctgtggga gaactaactg aaaatggttt gacattagaa gaatggttgc catcaacatg
2941 gattacagat accattcccc gaagatgtcc atttgtgcca cagatgggtg atgaggttta
3001 ttatttccga caaggacatg aagcctatgt cgaaatggcc cggaaaaata aaatatatag
3061 tatcaatccc aaaaaacaac catggcataa aatggagcta cgggaacaag aacttatgaa
3121 aatagttggc ataaagtatg aagtgggatt acctaccctt tgctgcctta aacttgcttt
3181 tctagatcct gatactggta aactgactgg cggatcattt accatgaaat accatgatat
3241 gcctgacgtt atagatttcc tagtcttgag acaacaattt gatgatgcaa aatacaggcg
3301 atggaatata ggtgaccgct tcaggtctgt catagatgat gcctggtggt ttggaacaat
3361 cgaaagccag gaacctcttc aacttgagta ccctgatagt ctgtttcaat gctacaatgt
3421 ttgctgggac aatggagata cagaaaagat gagtccttgg gatatggagc ttatacctaa
3481 taatgctgta tttcctgaag aactaggtac cagtgttcct ttaactgatg gtgagtgcag
3541 atcactaatc tataaacctc ttgatggaga atggggtacc aatcccaggg atgaagaatg
3601 tgaaagaatt gtggcaggaa taaaccagtt gatgacacta gatattgcct cagcatttgt
3661 ggcccccgtg gatctgcaag cctatcccat gtattgcaca gtagtggcat atccaacgga
3721 tctaagtaca attaaacaaa gactggaaaa caggttttac aggcgggttt cttccctaat
3781 gtgggaagtt cgatatatag agcataatac acgaacattt aatgagcctg gaagccctat
3841 tgtgaaatct gctaaattcg tgactgatct tcttctacat tttataaagg atcagacttg
3901 ttataacata attccacttt ataattcaat gaagaagaaa gttttgtctg attctgagga
3961 tgaagagaaa gatgctgatg tgccaggaac ttctactcga aaaaggaagg accatcagcc
4021 tagaagaaga ttacgtaata gagcccagtc ttacgatatt caagcatgga agaaacagtg
4081 tgaagaattg ttaaatctca tatttcaatg tgaagattca gagcctttcc gtcagccggt
4141 agatctcctt gaatatccag actacagaga catcattgac actccaatgg attttgctac
4201 cgttagagaa actttagagg ctgggaatta tgagtcacca atggagttat gtaaagatgt
4261 cagacttatt ttcagtaatt ccaaagcata tacaccaagc aaaagatcaa ggatttacag
4321 catgagtttg cgcctgtctg ctttctttga agaacacatt agttcagttt tatcagatta
4381 taaatctgct cttcgttttc ataaaagaaa taccataacc aaaaggagga agaaaagaaa
4441 cagaagcagc tctgtttcca gtagtgctgc atcaagccct gaaaggaaaa aaaggatctt
4501 aaaaccccag ctaaaatcag aaagctctac ctctgcattc tctacaccta cacgatcaat
4561 accgccaaga cacaatgctg ctcagataaa cggtaaaaca gaatctagtt ctgtggttcg
4621 aaccagaagc aaccgagtgg ttgtagatcc agttgtcact gagcaaccat ctacttcttc
4681 agctgcaaag acttttatta caaaagctaa tgcatctgca ataccaggga aaacaatact
4741 agagaattct gtgaaacatt ccaaagcttt gaatactctt tccagtcctg gtcaatccag
4801 ttttagtcat ggcactagga ataattctgc aaaagaaaac atggaaaagg aaaagccagt
4861 caaacgtaaa atgaagtcat ctgtactccc aaaggcgtcc actctttcaa agtcatcagc
4921 tgtcattgag caaggagatt gtaagaacaa cgctcttgta ccaggaacca ttcaagtaaa
4981 tggccatgga ggacagccat caaaacttgt gaagagggga cctggaagga aacctaaagt
5041 agaagttaat accaatagtg gtgaaattat acacaagaaa aggggtagaa agcccaaaaa
5101 gctacagtat gcaaagccag aagatttaga gcaaaataat gtgcatccca tcagagatga
5161 agtacttcct tcttcaacat gcaattttct ttctgaaact aataatgtaa aggaagattt
5221 gttacagaaa aagaatcgtg gaggtaggaa gcccaaaagg aagatgaaga cacaaaaatt
5281 agatgcagat ctcctagtcc ctgcaagtgt caaagtgtta aggagaagta accgaaaaaa
5341 gatagatgat cctatagatg aggaagaaga gtttgaagaa ctcaaaggct ctgaacccca
5401 catgagaact agaaatcaag gtcgaaggac agctttctat aatgaggatg actctgaaga
5461 ggagcaaagg cagctgttgt tcgaagacac ctctttaact tttggaactt ctagtagagg
5521 acgagtccga aagttgactg aaaaagcaaa agctaattta attggttggt aacttgtacc
5581 aaaatatttt acttcaaaat ctataaagca ggtacagtta aggaataagt agaactaagg
5641 cttctgcttc cttgctgctg tggt
//