LOCUS BC137455 1052 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens RCD1 required for cell differentiation1 homolog (S.
pombe), mRNA (cDNA clone MGC:169078 IMAGE:9021455), complete cds.
ACCESSION BC137455
VERSION BC137455.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1052)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1052)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: c Column: 21.
FEATURES Location/Qualifiers
source 1..1052
/db_xref="H-InvDB:HIT000501353"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:169078 IMAGE:9021455"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: ACTCCTTC"
gene 1..1052
/gene="RQCD1"
/gene_synonym="CNOT9"
/gene_synonym="RCD1"
/gene_synonym="RCD1+"
/db_xref="GeneID:9125"
/db_xref="HGNC:HGNC:10445"
CDS 98..997
/gene="RQCD1"
/gene_synonym="CNOT9"
/gene_synonym="RCD1"
/gene_synonym="RCD1+"
/codon_start=1
/product="RCD1 required for cell differentiation1 homolog
(S. pombe)"
/protein_id="AAI37456.1"
/db_xref="GeneID:9125"
/db_xref="HGNC:HGNC:10445"
/translation="MHSLATAAPVPTTLAQVDREKIYQWINELSSPETRENALLELSK
KRESVPDLAPMLWHSFGTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVAS
HPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLT
TEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVL
QLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWL
AQLVKNLQEGQVTDPRGIPLPPQ"
BASE COUNT 265 a 281 c 248 g 258 t
ORIGIN
1 gctacggcgg ctcattgttt tccgctgcag gggtgctgaa ggggggacgc gggtcggacg
61 cgtccggctg tggaagagag cggcggccgc tcacaacatg cacagcctgg cgacggctgc
121 gcctgtgcct actacactgg cacaagtgga tagagaaaag atctatcagt ggatcaatga
181 gctgtccagt cctgagacta gggaaaatgc tttgctggag ctaagtaaga agcgagaatc
241 tgttcctgac cttgcaccca tgctgtggca ttcatttggt actattgcag cacttttaca
301 ggaaattgta aatatttatc catctatcaa cccacccacc ttgacagcac accagtctaa
361 cagagtttgc aatgctctgg cattactgca atgtgtagca tcacatccag aaaccaggtc
421 agcgtttctc gcagcacaca tcccactttt tttgtacccc tttttgcaca ctgtcagcaa
481 aacacgtccc tttgagtatc tccggctcac cagccttgga gttattgggg ccctggtgaa
541 aacagatgaa caagaagtaa tcaacttttt attaacaaca gaaattatcc ctttatgttt
601 gcgaattatg gaatctggaa gtgaactttc taaaacagtt gccacattca tcctccagaa
661 gatcttgtta gatgacactg gtttggctta tatatgtcag acgtatgagc gtttctccca
721 tgttgccatg atcttgggta agatggtcct gcagctatcc aaagagcctt ctgcccgtct
781 gctgaagcat gtagtgagat gttaccttcg actttcagat aaccccaggg cacgtgaagc
841 actcagacag tgcctccctg accagctgaa agacacaacc ttcgcccagg tgctaaaaga
901 tgacaccacc acgaaacgct ggcttgcaca actggtgaag aacctgcaag agggccaggt
961 caccgatccc cggggtatcc ccctgccccc tcagtgatcc ttccctgttc cctcccacta
1021 ctcccccaag ttggggaaag gagggggaac ct
//