LOCUS BC137448 1269 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens gastrulation brain homeobox 2, mRNA (cDNA clone
MGC:169071 IMAGE:9021448), complete cds.
ACCESSION BC137448
VERSION BC137448.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1269)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1269)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 673 Row: c Column: 14.
FEATURES Location/Qualifiers
source 1..1269
/db_xref="H-InvDB:HIT000501350"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:169071 IMAGE:9021448"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AGCATTTT"
gene 1..1269
/gene="GBX2"
/db_xref="GeneID:2637"
/db_xref="HGNC:HGNC:4186"
/db_xref="MIM:601135"
CDS 39..1085
/gene="GBX2"
/codon_start=1
/product="gastrulation brain homeobox 2"
/protein_id="AAI37449.1"
/db_xref="GeneID:2637"
/db_xref="HGNC:HGNC:4186"
/db_xref="MIM:601135"
/translation="MSAAFPPSLMMMQRPLGSSTAFSIDSLIGSPPQPSPGHFVYTGY
PMFMPYRPVVLPPPPPPPPALPQAALQPALPPAHPHHQIPSLPTGFCSSLAQGMALTS
TLMATLPGGFSASPQHQEAAAARKFAPQPLPGGGNFDKAEALQADAEDGKGFLAKEGS
LLAFSAAETVQASLVGAVRGQGKDESKVEDDPKGKEESFSLESDVDYSSDDNLTGQAA
HKEEDPGHALEETPPSSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTE
RSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNANSKTGEPSRNPKIVVPIPVHVSRF
AIRSQHQQLEQARP"
BASE COUNT 259 a 439 c 388 g 183 t
ORIGIN
1 gacttttcgc ctctcgctgg cctctaccga gcgcgtctat gagcgcagcg ttcccgccgt
61 cgctgatgat gatgcagcgc ccgctgggga gtagcaccgc cttcagcata gactcgctga
121 tcggcagccc gccgcagccc agccccggcc atttcgtcta caccggctac cccatgttca
181 tgccctaccg gccggtagtg ctgccgccgc cgccgccgcc gccgcccgcg ctgccccagg
241 ccgcgctgca gccagcgctg ccgcccgcac accctcacca ccagatcccc agcctgccca
301 caggcttctg ctccagcctg gcgcagggca tggcgctcac ctctacgctc atggccacgc
361 tccccggcgg cttctccgcg tcgccccagc accaggaggc ggcagcggcc cgcaagttcg
421 cgccgcagcc gctgcccggc ggcggtaact tcgacaaggc ggaggcgctg caggctgacg
481 cggaggacgg caaaggcttc ctggccaaag agggctcgct gctcgccttc tccgcggccg
541 agacggtgca ggcttcgctc gtcggggctg tccgagggca agggaaagac gagtcaaagg
601 tggaagacga cccgaagggc aaggaggaga gcttctcgct ggagagcgat gtggactaca
661 gctcggatga caatctgact ggccaggcag ctcacaagga ggaagacccg ggccacgcgc
721 tggaggagac cccgccgagc agcggcgccg cgggcagcac cacgtctacg ggcaagaacc
781 ggcggcggcg gactgccttc accagcgagc agctgctgga gctagagaag gagttccact
841 gcaaaaagta cctctccttg accgagcgct cgcagatcgc ccacgccctc aaactcagcg
901 aggtgcaggt gaaaatctgg ttccagaacc gacgggccaa gtggaaacgg gtgaaggcag
961 gcaatgccaa ttccaagaca ggggagccct cccggaaccc taagatcgtc gtccccatcc
1021 ctgtccacgt cagcaggttc gctatcagaa gtcagcatca gcagctagaa caggcccggc
1081 cctgagggtc cagaagggcc agggcctggc acccacctgg agaagccccc gcacccgagg
1141 gaacccatgg tggactccac tgtgtttgaa gcaacaaagt cacagcccag ctgtggccat
1201 cccaagcaaa ttgagaatat attcactaaa tgggcttaaa agactgcttt tgaaggggct
1261 tacagccac
//