LOCUS BC137435 3968 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens zinc finger, CCHC domain containing 2, mRNA (cDNA clone MGC:169056 IMAGE:9021433), complete cds. ACCESSION BC137435 VERSION BC137435.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3968) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3968) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 673 Row: b Column: 23. FEATURES Location/Qualifiers source 1..3968 /db_xref="H-InvDB:HIT000501337" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:169056 IMAGE:9021433" /tissue_type="Brain, cerebral cortex, PCR rescued clones" /clone_lib="NIH_MGC_287" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCCATGTT" gene 1..3968 /gene="ZCCHC2" /gene_synonym="DKFZp451A185" /db_xref="GeneID:54877" /db_xref="HGNC:HGNC:22916" CDS 25..2598 /gene="ZCCHC2" /gene_synonym="DKFZp451A185" /codon_start=1 /product="zinc finger, CCHC domain containing 2" /protein_id="AAI37436.1" /db_xref="GeneID:54877" /db_xref="HGNC:HGNC:22916" /translation="MQNNESSLIEQAPIPQDGLTVAPHRAQREAVHIEKIMLKGVQRK RADKYWEYTFKVNWSDLSVTTVTKTHQELQEFLLKLPKELSSETFDKTILRALNQGSL KREERRHPDLEPILRQLFSSSSQAFLQSQKVHSFFQSISSDSLHSINNLQSSLKTSKI LEHLKEDSSEASSQEEDVLQHAIIHKKHTGKSPIVNNIGTSCSPLDGLTMQYSEQNGI VDWRKQSCTTIQHPEHCVTSADQHSAEKRSLSSINKKKGKPQTEKEKIKKTDNRLNSR INGIRLSTPQHAHGGTVKDVNLDIGSGHDTCGETSSESYSSPSSPRHDGRESFESEEE KDRDTDSNSEDSGNPSTTRFTGYGSVNQTVTVKPPVQIASLGNENGNLLEDPLNSPKY QHISFMPTLHCVMHNGAQKSEVVVPAPKPADGKTIGMLVPSPVAISAIRESANSTPVG ILGPTACTGESEKHLELLASPLPIPSTFLPHSSTPALHLTVQRLKLPPPQGSSESCTV NIPQQPPGSLSIASPNTAFIPIHNPGSFPGSPVATTDPITKSASQVVGLNQMVPQIEG NTGTVPQPTNVKVVLPAAGLSAAQPPASYPLPGSPLAAGVLPSQNSSVLSTAATSPQP ASAGISQAQATVPPAVPTHTPGPAPSPSPALTHSTAQSDSTSYISAVGNTNANGTVVP PQQMGSGPCGSCGRRCSCGTNGNLQLNSYYYPNPMPGPMYRVPSFFTLPSICNGSYLN QAHQSNGNQLPFFLPQTPYANGLVHDPVMGSQANYGMQQMAGFGRFYPVYPAPNVVAN TSGSGPKKNGNVSCYNCGVSGHYAQDCKQSSMEANQQGTYRLRYAPPLPPSNDTLDSA D" BASE COUNT 1164 a 930 c 819 g 1055 t ORIGIN 1 aacaactctg ctcatggtga ttacatgcaa aataacgaga gcagcttaat agagcaagct 61 ccaatacctc aggacggact taccgtggca cctcacagag ctcagcgaga agctgtacac 121 attgagaaga taatgttgaa aggagtccag agaaaaagag ctgacaaata ctgggagtac 181 actttcaaag taaattggtc tgatctttca gtcacaacag taacaaaaac ccaccaagaa 241 ctacaggaat ttctactgaa gcttccaaag gaactgtctt cagagacttt tgacaagacc 301 atcttaagag ccctgaatca gggttccttg aaaagggagg aacggcgaca tcctgaccta 361 gagcccatcc taaggcagct attttcaagt tcatcacaag cttttctaca aagtcagaaa 421 gtacacagct tctttcagtc catatcatca gactccctac acagtatcaa taacttacaa 481 tcctctctga agacttctaa gatattagaa cacttaaaag aagacagctc tgaagcttca 541 agtcaagaag aagatgtgtt gcagcacgcc ataatccaca agaagcatac tgggaaaagt 601 cccattgtga acaatattgg tacaagttgt tctccattgg atgggcttac catgcaatat 661 tctgaacaga atggaattgt ggattggagg aagcaaagct gtaccaccat tcaacaccca 721 gagcactgtg tgacctcggc tgaccagcat tctgctgaaa aacggagttt atcttcaata 781 aataagaaga aaggaaagcc acaaacagaa aaggagaaaa ttaagaaaac tgacaacaga 841 ttgaatagta gaataaatgg tattagactc tccactcctc agcatgccca tggtggtact 901 gtgaaagatg tgaatttgga cattggctct ggacatgaca catgtggaga aacatcttcg 961 gagagttaca gttctccatc tagtccccga catgatggaa gagaaagttt tgaaagtgaa 1021 gaagagaaag acagagacac agacagcaat tctgaggatt ctgggaatcc atcaacaact 1081 aggtttacag gttacggttc tgtcaaccag actgtcactg tcaagccacc tgttcaaatt 1141 gcttcactag gaaatgagaa tggaaacctt ttagaagatc ccttaaactc acccaagtat 1201 cagcatattt cttttatgcc aacgttacac tgtgtcatgc acaatggtgc ccagaagtct 1261 gaagttgtcg ttcctgcacc caaacccgct gatggcaaaa ccatagggat gcttgttcct 1321 agtcctgttg ctatttctgc aataagggag tctgcaaatt caacccctgt tggaatacta 1381 gggccaacag cttgcactgg agaatcggaa aagcaccttg agttactggc ttccccttta 1441 cctatcccat caaccttcct tccacacagt agtactcccg ctttgcatct tacagttcag 1501 aggctaaagt tgccaccacc acagggatct tctgagagct gcacagttaa catcccacaa 1561 caaccacccg gaagcctgag catcgcatca ccaaacactg cctttattcc tatccataac 1621 ccaggtagtt tcccaggctc tcctgttgct accacggacc ccatcacaaa atctgcatcc 1681 caagtggtag gactcaatca aatggtgcct caaattgagg gaaacacagg gacagtccct 1741 cagcctacca atgtgaaggt agttcttcca gcagctggcc tctcagctgc tcagccacca 1801 gcttcctacc ccttaccagg ctctcccctt gctgccggcg tgttacccag ccagaactcc 1861 agtgtgctca gcacagcagc aacttctccc cagccagcga gcgcaggtat cagccaggcc 1921 caggcaactg ttcctcctgc agttcctacc cacaccccag gccctgcccc gagcccaagc 1981 cctgccttga cacacagtac cgcgcagagt gacagcacct cttacatcag tgctgtgggg 2041 aacacgaacg ctaatgggac agtagtgcca ccgcagcaga tgggctcagg tccttgtggt 2101 tcttgtgggc gaaggtgcag ctgtgggacc aatggaaacc ttcagctaaa tagttactat 2161 tatcctaatc caatgcctgg accaatgtac cgagtccctt cattctttac tctgccatcc 2221 atttgcaatg gcagctacct caaccaagca catcagagca atggaaacca acttcctttt 2281 tttctgcctc agactccata tgcaaatgga ctggtacatg acccagtcat ggggagccaa 2341 gccaactatg gcatgcagca gatggcagga tttgggagat tctatcctgt atatccagca 2401 cctaacgtag ttgccaacac cagtggttcg gggcccaaga agaatgggaa tgtctcatgt 2461 tacaattgtg gtgtaagcgg acactatgca caggactgta agcagtcgtc catggaggcc 2521 aatcaacaag gcacttacag actgagatac gcacctcccc tccccccttc taatgatacg 2581 ttggattctg cagactgaaa cgagtaaagc ttgcctactt aatacactca agtgtgggga 2641 gtcatggggt gtggagggga ggaaaggaaa ggtattttgt ttctttgtct atacatttcc 2701 tagatttcta tgcagttggg atttttcatt tctcttgtac caatgtccaa aacaagaaag 2761 aatgcaatgc ttttgagcct ctggtctcct ggttcaacaa caggcttata tgtatgatac 2821 atgtaattta aaccttcaga caaacttaaa tgttggtgcg tgcttttttt ttttttttta 2881 cactgaatac ttgctgtgtg caatgtttac tgaatcttta aaactgtgta tttgaccttt 2941 tttttacaac actggtgaca gtcatatggt tttgaaaaaa aaaaaagaaa ttttgcttct 3001 tcccagcttt tctcactttc accctaaacg acacttcctc cccagccagc ctcactctgt 3061 ctccggcccg cagcaggagc agccagcagt gcattcaccc cacttttgta aactgctctg 3121 catataaacc aagggcagaa tgtttcaccc tgatcttatg ggaggaatca aactcccaaa 3181 atagtgtgta tatatgtaat aaacagcgtc acgtaaatac atatatgcag tgcttgttgt 3241 ccaaatagaa atgaaaataa gtggaagaga gaggaagaag tcaaaccata tgaaactgaa 3301 aaaatatgac gtacgaaatg gacaaaaagc tttttctgaa accaactttt tacttccatc 3361 atcctttttt agcctgttgc ttcagagaga cacaaagtga acacactggt gtgaatgtcg 3421 ctctctgtgt gcttgtgttt gtaatgaaag tctacagcca attttacttg tctaccaccg 3481 tgttgtgctc aaagagacac tacttgagtg aagatttctt ctttccctgt accagctgtt 3541 acagtgttac gttgtgttta aaatgtgtat ggtttattgc aatctgaaca gagctatggg 3601 tttctaccat aagtcaggtt gtttgttccc taacctgtct ctcgtagcaa agtcactttt 3661 ataacagttt accactatgc ttgattataa tgtgaaaggc ggaattctga gtgtgttaag 3721 atggtattaa tcatgtcggt gtcatgtcac taagtttaat gctgctgttt ttaaaaaaaa 3781 aaaaaaaaag tttttttaaa aagccaatct atgtactaaa ttgcttccag gtaatttttg 3841 atttcctaaa gtgcactgag gttatctgga agattgggtg tattttttgg tgactgctgc 3901 attcatcagc aatgaacagt ttccactgta tagtcctagg ggtcaggggg tgggggtttc 3961 attttcca //