LOCUS BC137356 1522 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens OTU domain containing 6A, mRNA (cDNA clone MGC:168977
IMAGE:9021354), complete cds.
ACCESSION BC137356
VERSION BC137356.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1522)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1522)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: o Column: 16.
FEATURES Location/Qualifiers
source 1..1522
/db_xref="H-InvDB:HIT000501284"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168977 IMAGE:9021354"
/tissue_type="Testis, PCR rescued clones"
/clone_lib="NIH_MGC_373"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AGGCGAAA"
gene 1..1522
/gene="OTUD6A"
/gene_synonym="DUBA2"
/gene_synonym="HSHIN6"
/db_xref="GeneID:139562"
/db_xref="HGNC:HGNC:32312"
/db_xref="MIM:300714"
CDS 31..897
/gene="OTUD6A"
/gene_synonym="DUBA2"
/gene_synonym="HSHIN6"
/codon_start=1
/product="OTUD6A protein"
/protein_id="AAI37357.1"
/db_xref="GeneID:139562"
/db_xref="HGNC:HGNC:32312"
/db_xref="MIM:300714"
/translation="MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKTDKTKRKQL
LQDVARMEAEMAQKHRQELEKFQDDSSIESVVEDLAKMNLENRPPRSSKAHRKRERME
SEERERQESIFQAEMSEHLAGFKREEEEKLAAILGARGLEMKAIPADGHCMYRAIQDQ
LVFSVSVEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYCDNIVRTTAWGG
QLELRALSHVLKTPIEVIQADSPTLIIGEEYVKKPIILVYLRYAYSLGEHYNSVTPLE
AGAAGGVLPRLL"
BASE COUNT 361 a 457 c 423 g 281 t
ORIGIN
1 aatttcaact cccgcttgcc attcaacatc atggatgatc cgaagagtga acagcagcgc
61 atactgcgcc gccaccaacg cgagaggcag gagctgcagg cccagatccg gagcttaaaa
121 aactcggtcc ccaagaccga caagacgaaa agaaagcagt tgctccaaga cgtggcccgc
181 atggaggccg agatggctca gaagcaccgg caggagctgg agaagttcca agacgacagt
241 agcattgaat ctgtcgtcga agacctggcc aagatgaatc tggaaaaccg gcctccccgc
301 tcctccaaag cccacagaaa gagagaaaga atggagtccg aggagaggga gcgccaggag
361 agcatcttcc aggctgagat gtcggagcac ctggccggct tcaagcgcga ggaggaggag
421 aagctcgccg ccatcctggg agccaggggt ctggagatga aagcgatccc ggccgacggc
481 cactgcatgt accgcgccat ccaagaccag ctggtgttca gcgtgtctgt ggagatgctg
541 cgctgccgca ccgccagcta catgaagaag cacgtcgacg agttcctgcc cttcttcagc
601 aaccccgaga ccagcgactc cttcggctac gacgacttca tgatctactg cgacaacatc
661 gtgcgcacca cggcatgggg aggccagctg gagctgaggg ccctgtcgca cgtcctgaag
721 acccccatcg aggtgatcca ggccgactcg cccaccttga tcatcgggga ggagtacgtc
781 aagaagccga tcatcctggt ctacctgcgc tatgcctaca gcctcggcga gcactacaac
841 tccgtgacac cgctcgaggc cggcgccgcc gggggcgtgc tcccgcgtct cctgtaggcc
901 ccaaggcgct gagcagcccc gggaaactgt cgccgtcgcc gcatctcctc agtaggctca
961 gtttattttc cccttttgct tttctctgtt tttcttttcc ttccttttaa tcaaaactac
1021 ccgcccccgc cccgcccccg ctttcctaac cttgctgctt tcacagggtg ggaaacgaaa
1081 ttcgagggaa attccccgga aatatgaggg aaatctctgc attgcaccac cagaggggca
1141 taaatttgaa agttctaacc tcttcttgcc cttaagggtc ttttacctcc ctcaccaact
1201 aagatttggt catgttgcgt ataacttcac cacaaaaatg gaaatattgg ccgggcgcgg
1261 tggctcacgc ctgtaatccc agcactttgg gaggccgagg cgggcggatc acgaggtcag
1321 gagttcgaga ccagcctggc caacatggtg aaaccccacc tctacaaaaa atacaaaaat
1381 tagccgggcg tggtggcagg cacctgtaat cctagctact tggggtgctg aggcaggaga
1441 atcaactgaa cccgggaggc ggaggctgca gtgggccggg atcgtactac tgcactccag
1501 catggaagac agcgagactc cg
//