LOCUS BC137349 4406 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens chromosome 9 open reading frame 79, mRNA (cDNA clone
MGC:168970 IMAGE:9021347), complete cds.
ACCESSION BC137349
VERSION BC137349.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4406)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4406)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: o Column: 9.
FEATURES Location/Qualifiers
source 1..4406
/db_xref="H-InvDB:HIT000501277"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168970 IMAGE:9021347"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_363"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: GAGGGCAA"
gene 1..4406
/gene="C9orf79"
/db_xref="GeneID:286234"
/db_xref="HGNC:HGNC:26672"
CDS 32..4369
/gene="C9orf79"
/codon_start=1
/product="chromosome 9 open reading frame 79"
/protein_id="AAI37350.1"
/db_xref="GeneID:286234"
/db_xref="HGNC:HGNC:26672"
/translation="MGNLVIPLGKGRAGRVESGQRIPPPAPRPSVECTGDDIALQMEK
MLFPLKSPSATWLSPSSTPWMMDFILTSVCGLVLLFLLLLYVHSDPPSPPPGRKRSSR
EPQRERSGRSRSRKISALKACRILLRELEETRDLNYLLESHLRKLAGEGSSHLPLGGD
PLGDVCKPVPAKAHQPHGKCMQDPSPASLSPPAPPAPLASTLSPGPMTFSEPFGPHST
LSASGPPEPLLPLKCPATQPHVVFPPSPQPHGPLASSPPPPDSSLAGLQCGSTTCPVP
QSSPLHNQVLPPPTRVISGLGCSSDPIWDLYCWREAATTWGLSTYSHGKSQPRHLPDH
TSEASFWGDPTPKHMEVGGCTFIHPDVQKLLETLIAKRALMKMWQEKERKRADHPHMT
SLGKEWDITTLNPFWNVSTQPQQLPRPQQVSDATTVGNHLQQKRSQLFWDLPSLNSES
LATTVWVSRNPSSQNAHSVPLDKASTSLPGEPEVEASSQLSQAPPQPHHMAQPQHFTP
AWPQSQPPPLAEIQTQAHLSPPVPSLGCSSPPQIRGCGASYPTSQERTQSVIPTGKEY
LEWPLKKRPKWKRVLPSLLKKSQAVLSQPTAHLPQERPASWSPKSAPILPGVVTSPEL
PEHWWQGRNAIHQEQSCGPPSRLQASGDLLQPDGEFPGRPQSQAEDTQQALLPSQPSD
FAGKGRKDVQKTGFRSSGRFSDKGCLGSKLGPDPSRDQGSGRTSVKALDEDKEAEGDL
RRSWKYQSVSSTPRDPDKEHLENKLQIHLARKVGEIKEGWIPMPVRRSWLMAKCAVPK
SDTHRKPGKLASWRGGKAHVNTSQELSFLHPCTQQILEVHLVRFCVRHSWGTDLQSLE
PINVWSGEAQAPPFPQSTFTPWASWVSRVESVPKVPIFLGKRPQNGPGDNRTTSKSVP
TVSGPLAAPPPEQEGVQRPPRGSQSADTHGRSEAFPTGHKGRGCSQPPTCSLVGRTWQ
SRTVLESGKPKPRLEGSMGSEMAGNEAWLESESMSPGDPCSSRALQVLSIGSQWARAE
DALQALKVGEKPPTWEVTLGASVRASSGSVQEDLRSTGALGTTGNPSASSVCVAQDPE
QLHLKAQVVSEIALIVQVDSEEQLPGRAPGILLQDGATGLCLPGRHMDMLTAADRLPT
QAPLSTSQSVSGKNMTASQGPCALLWKGGDSPGQQEPGSPKAKAPQKSQKTLGCADKG
EAHRRPRTGEQGHRSKGPRTSEASGRSHPAQAREIGDKQERKYNQLQLEKGQTPPESH
FQRKISHHPQGLHPRKGGTRWEDVLQKGKPGADAFQSWGSGPPRQFMDCMADKAWTIS
RVVGQILVDKLGLQWGRGPSEVNRHKGDFRAQENVPSCCHRGHCHQERSREMRALACS
PKATPKGHHCPVKNRGIRDRDSSWAPPPREPVSPAGPHHHRPRMASTSGGPHPQLQEL
MSAQRCLAS"
BASE COUNT 1027 a 1389 c 1238 g 752 t
ORIGIN
1 gggatgccca gagctcagtt gcttgaaggc gatgggaaat ctcgtcatcc ctctagggaa
61 gggcagggca ggcagggttg agagtgggca gaggattcca cccccagctc ccagaccatc
121 tgtggagtgc acaggagacg acattgcact tcagatggag aaaatgctct ttcctctgaa
181 gagccctagt gccacatggc tgagccctag ctccactccc tggatgatgg atttcatcct
241 caccagtgtg tgtggcctag tgctcctctt cctattgctc ctctacgtcc acagtgaccc
301 accctcaccc ccgcccggga ggaagaggag cagcagggag cctcaaaggg agagaagcgg
361 gaggtccagg agcaggaaga tctcagctct gaaagcttgc agaatcctcc tgagggagct
421 ggaggagact cgggacctga actaccttct ggaaagccac ctgaggaagc tcgctggcga
481 aggcagctcc cacctgccct taggtggaga ccccctgggg gacgtgtgta aaccagtgcc
541 tgctaaggcc caccagccgc atgggaaatg catgcaagat ccgtctcctg ccagcttgtc
601 cccaccagct cccccagctc ctctggcctc caccctgtca ccaggcccga tgaccttctc
661 agagcctttt ggaccacact caaccctgag tgcctccggg ccaccagagc ccttgcttcc
721 cctaaaatgc cctgcaaccc agccacatgt ggtttttcct ccttcaccac agccgcatgg
781 tcccctggcc tcctctccac ctccacccga ctccagcctg gctggacttc agtgtggctc
841 cacaacatgc cccgtccccc agagctcccc tctacacaac caggtgctgc ctcctccaac
901 cagggtgatc tctggcctgg ggtgctccag cgatcccatc tgggacctct attgctggag
961 ggaggctgcc accacctggg gcctctccac ctactcacat ggcaaatccc agccacggca
1021 tcttcccgac cacacctcag aggcttcctt ctggggagac cccacaccca agcacatgga
1081 ggtaggtggc tgcacattca tccaccctga cgtgcagaag ctgctggaga ccctcatcgc
1141 caagagagca ctgatgaaga tgtggcagga gaaagaaaga aaacgggccg accacccgca
1201 catgacatca ctggggaagg agtgggacat cacgacccta aatcccttct ggaacgtgtc
1261 aacccagcca cagcagctgc cccgtcctca gcaagtctct gatgccacaa ccgtggggaa
1321 ccacttacag cagaaacgca gccagctttt ctgggacctc ccctctctca atagcgagtc
1381 cctggcgacc acagtctggg tttctaggaa cccttcctca cagaatgcac actctgtacc
1441 actggataaa gcctccactt ctcttccagg tgaacctgag gttgaggcat cctcacagct
1501 ttcccaggca ccgccccagc cccaccacat ggcccagccc caacatttca ctccagcctg
1561 gccccagtcc cagcccccac ctttggctga gatccagacc caggcccacc tctcaccccc
1621 tgtcccaagc ctggggtgct cttctccacc ccagattagg ggctgtgggg catcttaccc
1681 tacatcccag gagaggacac agtctgtcat ccccactgga aaggagtatc ttgaatggcc
1741 cttgaagaag cgaccaaagt ggaagagggt tttgccctct ctcctcaaaa agtctcaggc
1801 tgttctgagc cagcccactg cccaccttcc ccaagagagg ccggcctcct ggagccccaa
1861 gtcagccccc atccttcccg gggttgtcac cagccctgag ctcccagagc actggtggca
1921 aggaaggaat gccatccacc aggagcagtc ctgtggccct cccagcagat tgcaggcatc
1981 tggggacctg ctacagcctg atggggaatt cccagggagg ccccagagtc aggcagaaga
2041 cacgcagcag gccctcttgc cctcccagcc ttctgacttt gcagggaagg gcaggaagga
2101 tgtgcagaag accgggttca ggagctccgg aaggttctct gacaaggggt gcttagggtc
2161 caaactaggg ccggacccaa gccgggatca aggctcagga aggacctcag tgaaggctct
2221 ggacgaagac aaggaggcag aaggtgactt acggaggtcc tggaagtacc aatcagtaag
2281 ttccacaccc agggacccag acaaggagca tctggaaaac aagctgcaaa tccatctggc
2341 caggaaggta ggggagatca aagagggctg gatccccatg cctgtgcgtc gctcctggct
2401 catggccaaa tgtgctgttc ccaagtctga cacccacagg aaacctggga agctggcatc
2461 ctggaggggt gggaaagccc acgtgaacac ctcccaggag ctttccttcc tccatccctg
2521 cacccagcag atactggaag tacatcttgt aaggttctgt gtgaggcaca gctggggtac
2581 agacctccag tccctggagc ccataaatgt ctggtcaggt gaggctcagg ccccgccctt
2641 cccacaatcc acctttaccc cctgggcctc ctgggtatct cgggttgaat ctgtacccaa
2701 ggttcccatt ttcctgggaa aacgtcctca gaatggtcca ggagacaaca gaacaacaag
2761 caagtcagtc ccgaccgtga gtggccctct cgctgcccca ccgcctgagc aggagggagt
2821 ccagaggccc ccgagagggt cccagtcagc tgatacccat gggcgatcag aggcctttcc
2881 gactggacac aagggcaggg ggtgttctca gcccccaaca tgcagccttg tgggcagaac
2941 ctggcagagc aggactgtcc tggaatccgg gaaacccaaa cccagactag aggggagtat
3001 gggttcagaa atggctggga acgaggcatg gcttgagagt gagagcatgt ccccaggaga
3061 cccctgtagt agcagagccc tgcaagtgct cagcataggg tcccagtggg caagggctga
3121 agatgccctg caggcactga aagtggggga gaagccccca acttgggaag tcaccttggg
3181 agccagtgtg agggcaagtt cgggaagtgt tcaggaggat ctgaggagca caggggctct
3241 ggggaccact ggtaacccct cagcgtcttc agtctgtgtt gctcaggatc cagagcagct
3301 gcacctgaaa gcgcaggtgg tcagtgagat tgcgctcata gtgcaggtgg actcagagga
3361 gcagctgcca ggccgtgccc cgggcatcct cctccaggac ggcgccacag gcctgtgcct
3421 tccaggccgc cacatggaca tgctcactgc cgcagacagg ctgcccactc aagcccctct
3481 gtccacctcc cagagtgtgt ctggtaagaa catgacagct tcccaggggc catgtgccct
3541 cctatggaag ggaggggaca gtccagggca gcaggagcct gggagcccaa aagcaaaggc
3601 cccacagaag agtcagaaga cgctgggctg tgcggacaag ggcgaggccc acaggaggcc
3661 cagaacaggg gagcagggac acaggtccaa gggacccagg acctctgaag ccagtgggag
3721 gagccaccct gcccaagcca gggaaatagg agacaaacaa gaaaggaaat acaaccagct
3781 tcagctggag aagggacaga caccaccaga aagccacttc cagagaaaga tcagtcacca
3841 tccacagggt ctacacccca ggaaaggagg cacacggtgg gaagatgtcc tgcagaaagg
3901 caagcctggg gcagatgctt tccagagctg ggggtctggc ccaccaaggc agtttatgga
3961 ctgcatggct gacaaagcct ggaccatcag cagagttgtg ggacaaatcc tggtggacaa
4021 actggggctt cagtggggac gaggtccctc agaggtcaat cgccacaaag gtgacttccg
4081 cgcccaggag aatgtgcctt cctgctgcca caggggtcac tgccaccaag aacgtagcag
4141 agagatgaga gctctggcct gcagccctaa agccaccccc aagggccacc actgtcctgt
4201 caaaaacagg ggcatcagag acagagacag cagttgggcc ccacctccca gggagcctgt
4261 gtccccagct ggtccccacc accacaggcc aagaatggca agcacctcgg gcggccccca
4321 tccacagctg caggaactga tgtctgcaca gaggtgtctt gcctcctgaa ctagaccagt
4381 cttcttgcat gtctcctggg ggagac
//