LOCUS BC137297 1415 bp mRNA linear HUM 07-MAY-2009
DEFINITION Homo sapiens forkhead box I2, mRNA (cDNA clone IMAGE:9021294),
complete cds.
ACCESSION BC137297
VERSION BC137297.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1415)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1415)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: m Column: 4
This clone has the following problem: The cds is short compared to
the longest cds in the locus
single stranded.
FEATURES Location/Qualifiers
source 1..1415
/db_xref="H-InvDB:HIT000501239"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9021294"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CACCCACT"
gene 1..1415
/gene="FOXI2"
/db_xref="GeneID:399823"
/db_xref="HGNC:HGNC:32448"
CDS 95..499
/gene="FOXI2"
/codon_start=1
/product="FOXI2 protein"
/protein_id="AAI37298.1"
/db_xref="GeneID:399823"
/db_xref="HGNC:HGNC:32448"
/translation="MFDNGNFRRKRKRRAEASAAVRSGARSVGGAEAPALEPPSAACL
DLQASPSPSAPEAATCFSGFASAMSALAGGLGTFPGGLAGDFSFGRRPPTVATHAPQT
LNPSPGFAPGHQTAAAGFRLSHLLYSREGTEV"
BASE COUNT 251 a 487 c 441 g 236 t
ORIGIN
1 cctgtcgctc aacgactgct tcaagaaggt gccccgcgac gaggacgacc caggtaaagg
61 caattactgg accctggacc ccaactgcga gaagatgttt gacaacggga acttccgaag
121 gaagaggaag aggagagctg aagccagcgc ggccgtgcgc tcgggagcca ggagcgtggg
181 aggggccgag gcgccagcgc tggagccccc gagcgcggct tgcctggacc tgcaggcctc
241 gccctctcca tccgcacccg aggccgccac ctgcttctcc ggtttcgctt ctgctatgag
301 cgctctggct ggcggccttg gcaccttccc cgggggcctg gcgggcgact tttctttcgg
361 gaggcggcca ccgacagtcg ccacccacgc tccccagacc cttaacccct cccctggctt
421 cgcccctggc caccagaccg cggccgccgg cttccgcctc agtcacctcc tctacagccg
481 ggaagggacc gaagtttgaa gggaggctgg aggctagccg ggtgcgggtc cagaggtgct
541 gagctcaggc ctccggtttc ccctggtgac agccccacgt gttggcgttg aaggccttgg
601 tgccctggga ggaagcgcag agccgggggc ggctcggcca gcagggagct gggctgagcg
661 gctcttgggc tttggggtgg gtggcccttc tgctgtgcac ccctcaccca ggcgaccttc
721 ggagcctccc tgctctgcct ctaagtccag ccgccctggg cgtctagaac ctgtgctctc
781 gagggatttg ccttgaaggg gcggcgggtc ggccctcagc tccagcgttt tccaaggagg
841 ctggctgact ccaaagagcc ttagagcaga tgggaagaag gtgggctgcc agagcggccc
901 aggtggtggg ggccctttcc acctccaccc agcttggccc acctggctca gggccttccc
961 ttctgcttca gggaagctgc cgcaggggct gggggacaga gctcaggagc agctgcagtg
1021 ggctccaggt gggccaggag cctgcagtga ggggatctga gacagttggc attgggtcct
1081 gtgtaaggaa ggtcttgcta atggttggaa ctgctggtgg tgggagggag aagcactgcg
1141 tgggcagaaa gcgcccttgg gataccagct cccttccctg tcactcagcc ctggtccttg
1201 atgacccccc tctaggacaa ggcaactccc cagggccccg ccaccactga ccacaggagc
1261 ggtgcccagc acccaggagt tccccaaggg tccaggtttg tgccacccac acccacactc
1321 acacccacac tcacactcac actcacaccc acacccacac ccacacccac actcacaccc
1381 acactcacac tcacacccac actcacaccc acaca
//