LOCUS BC137279 4280 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens claspin homolog (Xenopus laevis), mRNA (cDNA clone
MGC:168899 IMAGE:9021276), complete cds.
ACCESSION BC137279
VERSION BC137279.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4280)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4280)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: l Column: 10.
FEATURES Location/Qualifiers
source 1..4280
/db_xref="H-InvDB:HIT000501223"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168899 IMAGE:9021276"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_364"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TCTGCTCT"
gene 1..4280
/gene="CLSPN"
/gene_synonym="CLASPIN"
/db_xref="GeneID:63967"
/db_xref="HGNC:HGNC:19715"
/db_xref="MIM:605434"
CDS 60..4079
/gene="CLSPN"
/gene_synonym="CLASPIN"
/codon_start=1
/product="claspin homolog (Xenopus laevis)"
/protein_id="AAI37280.1"
/db_xref="GeneID:63967"
/db_xref="HGNC:HGNC:19715"
/db_xref="MIM:605434"
/translation="MTGEVGSEVHLEINDPNVISQEEADSPSDSGQGSYETIGPLSEG
DSDEEIFVSKKLKNRKVLQDSDSETEDTNASPEKTTYDSAEEENKENLYAGKNTKIKR
IYKTVADSDESYMEKSLYQENLEAQVKPCLELSLQSGNSTDFTTDRKSSKKHIHDKEG
TAGKAKVKSKRRLEKEERKMEKIRQLKKKETKNQEDDVEQPFNDSGCLLVDKDLFETG
LEDENNSPLEDEESLESIRAAVKNKVKKHKKKEPSLESGVHSFEEGSELSKGTTRKER
KAARLSKEALKQLHSETQRLIRESALNLPYHMPENKTIHDFFKRKPRPTCHGNAMALL
KSSKYQSSHHKEIIDTANTTEMNSDHHSKGSEQTTGAENEVETNALPVVSKETQIITG
SDESCRKDLVKNEELEIQEKQKQSDIRPSPGDSSVLQQESNFLGNNHSEECQVGGLVA
FEPHALEGEGPQNPEETDEKVEEPEQQNKSSAVGPPEKVRRFTLDRLKQLGVDVSIKP
RLGADEDSFVILEPETNRELEALKQRFWKHANPAAKPRAGQTVNVNVIVKDMGTDGKE
ELKADVVPVTLAPKKLDGASHTKPGEKLQVLKAKLQEAMKLRRFEERQKRQALFKLDN
EDGFEEEEEEEEEMTDESEEDGEEKVEKEEKEEELEEEEEKEEEEEEEGNQETAEFLL
SSEEIETKDEKEMDKENNDGSSEIGKAVGFLSVPKSLSSDSTLLLFKDSSSKMGYFPT
EEKSETDENSGKQPSKLDEDDSCSLLTKESSHNSSFELIGSTIPSYQPCNRQTGRGTS
FFPTAGGFRSPSPGLFRASLVSSASKSSGKLSEPSLPIEDSQDLYNASPEPKTLFLGA
GDFQFCLEDDTQSQLLDADGFLNVRNHRNQYQALKPRLPLASMDENAMDANMDELLDL
CTGKFTSQAEKHLPRKSDKKENMEELLNLCSGKFTSQDASTPASSELNKQEKESSMGD
PMEEALALCSGSFPTDKEEEDEEEEFGDFRLVSNDNEFDSDEDEHSDSGNDLALEDHE
DDDEEELLKRSEKLKRQMRLRKYLEDEAEVSGSDVGSEDEYDGEEIDEYEEDVIDEVL
PSDEELQSQIKKIHMKTMLDDDKRQLRLYQERYLADGDLHSDGPGRMRKFRWKNIDDA
SQMDLFHRDSDDDQTEEQLDESEARWRKERIEREQWLRDMAQQGKITAEEEEEIGEDS
QFMILAKKVTAKALQKNASRPMVIQESKSLLRNPFEAIRPGSAQQVKTGSLLNQPKAV
LQKLAALSDHNPSAPRNSRNFVFHTLSPVKAEAAKESSKSQVKKRGPSFMTSPSPKHL
KTDDSTSGLTRSIFKYLES"
BASE COUNT 1489 a 792 c 1074 g 925 t
ORIGIN
1 ccggctgagg gaatcagaga cagctccgtc cctagtggag cgcaggggag gcagaagtca
61 tgacaggcga ggtgggttct gaggttcacc tagaaatcaa tgacccaaac gtcatttcac
121 aagaggaagc agatagtcct tcagatagtg gacagggcag ctatgaaaca attggaccct
181 tgagtgaagg agattcagat gaagagatat ttgtaagtaa gaagttgaaa aacaggaagg
241 ttctacaaga cagtgattcc gaaacagagg acacaaatgc ctctccagag aaaactacct
301 atgacagtgc cgaggaggaa aataaagaga atttatatgc tgggaaaaat acaaaaatca
361 aaaggattta caaaactgtg gcagacagtg atgaaagtta catggaaaag tctttgtatc
421 aggaaaatct tgaagcgcaa gtgaaacctt gcttagagct gagtcttcag tctggaaact
481 ctacagactt taccactgac agaaagagtt ccaaaaagca catacatgat aaagaaggaa
541 ctgcaggaaa agcaaaagta aaatcaaaaa gaagacttga gaaagaggag agaaaaatgg
601 aaaaaattag acagctaaaa aagaaggaaa caaaaaacca ggaagatgat gtagaacagc
661 catttaatga cagtggctgt cttcttgtgg ataaagacct ttttgaaact gggttggagg
721 atgaaaataa ctctccattg gaagatgaag agtcattaga atcaataaga gcagctgtaa
781 aaaacaaagt aaaaaagcac aagaaaaaag aaccatcttt ggagagtggg gtccattcat
841 ttgaggaagg aagtgagtta tcaaaaggaa ccacgaggaa ggaaagaaag gcagccagat
901 taagtaaaga agcattaaaa caactgcata gtgagactca gcgccttatt cgagagtctg
961 cactgaacct tccatatcat atgcctgaga ataaaaccat tcatgatttc ttcaaacgta
1021 aaccccggcc cacttgccac ggaaatgcca tggcactatt gaagtcatct aaatatcagt
1081 caagccatca caaagaaatc atagacactg caaatactac tgaaatgaac agtgatcacc
1141 atagtaaagg ttctgagcag acaacaggtg cagaaaatga agtggaaact aatgcactcc
1201 ctgtagtttc aaaggaaacc cagatcatta ctggatcaga tgagtcttgc aggaaggatt
1261 tggtaaaaaa tgaagagcta gaaattcagg agaaacagaa gcagagtgac attagacctt
1321 cacctgggga cagctcagtg ttgcaacagg aatccaactt cctcgggaac aatcacagtg
1381 aggaatgtca ggttggaggg cttgtagcat ttgaacctca tgccctggag ggtgaaggcc
1441 cccaaaatcc agaagaaaca gatgagaaag tggaagagcc tgagcagcaa aataaatcat
1501 cagcagttgg gccacctgaa aaagtgagac ggtttactct ggatagactt aagcaactgg
1561 gagtagatgt ttccattaaa ccacggctag gtgctgatga agattccttt gtgatacttg
1621 aacctgaaac caacagagaa ctggaagcct tgaagcagcg tttctggaag catgctaatc
1681 cagcagccaa acccagggct ggtcagacag tgaatgtgaa cgtcatagtg aaagacatgg
1741 gcactgatgg aaaggaagag ctaaaagcag atgtggtacc tgtgacttta gcacctaaga
1801 agttggatgg agcaagccac acaaaaccag gtgaaaagct tcaggtgtta aaagctaaac
1861 tgcaagaagc aatgaaactc cgaaggtttg aggagcgcca gaagcgccaa gcactgttta
1921 aattagataa tgaagatggg tttgaggaag aggaggagga agaggaagaa atgacagatg
1981 agtctgagga agatggagaa gagaaggtag agaaagaaga gaaagaggaa gaactagagg
2041 aagaggagga gaaagaagag gaggaggaag aagaaggaaa tcaggagact gcagaattcc
2101 ttcttagtag tgaagaaata gaaacaaaag atgaaaaaga aatggataaa gaaaataatg
2161 atggcagtag tgaaattggc aaggcagttg gcttcctctc tgttcccaag tctctctcat
2221 cagattctac tttacttctg tttaaggaca gctcttccaa gatgggttac tttcctactg
2281 aagaaaaatc agaaacagat gaaaactcag gcaagcagcc tagcaaactg gatgaggatg
2341 attcatgttc attgctaaca aaggagagca gccacaatag cagctttgag ctgattggct
2401 ccacgattcc atcctatcag ccttgcaaca gacaaacagg ccgtgggacc agttttttcc
2461 ctacagcagg aggattcaga tctccttccc ctgggctatt tcgagccagt ttggtcagct
2521 cagcttctaa gagttcaggg aaactgtctg agccttcact tcccatagag gattcccagg
2581 atctgtataa cgcctcccca gagcctaaga cacttttcct aggagcagga gacttccagt
2641 tctgtttaga agatgacact cagagccaac tgttggatgc agatgggttc ttaaatgtta
2701 gaaaccacag gaatcagtac caagctttga agcctcgatt gccattggcc agtatggatg
2761 agaatgccat ggatgccaac atggatgagc tgttggattt gtgtactgga aagttcacat
2821 ctcaggctga aaaacatcta cccaggaaga gtgacaagaa agagaacatg gaggaacttc
2881 tgaacctttg ttcaggaaaa ttcacttctc aggatgcctc cactccagcc tcatcagagt
2941 taaataaaca ggagaaggag agcagcatgg gtgatccaat ggaagaagca cttgctcttt
3001 gctcaggctc ttttcccaca gacaaggaag aggaagacga ggaggaggaa tttggagact
3061 ttcggcttgt ttcaaatgat aatgagtttg atagtgatga ggatgaacac agtgactctg
3121 gtaatgatct ggcactggaa gaccatgaag atgatgatga agaagaactc ctgaagcgat
3181 ctgagaagtt gaaaaggcaa atgaggttga ggaaatacct ggaggatgag gcagaggtgt
3241 caggaagtga tgtgggaagc gaagatgagt atgatgggga agaaattgat gaatatgaag
3301 aggacgtaat tgatgaagta cttccttctg atgaggaact gcagagtcaa atcaagaaaa
3361 tacacatgaa aactatgttg gatgatgata agcgacagct acgtttatac caagagaggt
3421 accttgctga tggggatctg cacagcgatg gtcctgggcg aatgaggaag tttcgatgga
3481 aaaacataga tgatgcttcc cagatggact tgttccacag agactctgat gatgatcaga
3541 ctgaagaaca gcttgatgag tcagaagcca ggtggaggaa ggagcgaatt gaacgagagc
3601 agtggcttcg ggacatggca cagcagggga aaattacagc tgaagaagaa gaagaaattg
3661 gggaggacag tcagtttatg atactggcca agaaagttac agccaaagca ctgcagaaga
3721 atgccagtcg ccctatggtt attcaggaat caaagtcttt gctcagaaat ccttttgaag
3781 ccatcagacc aggaagtgct caacaggtga agacaggctc actgctaaac cagcccaaag
3841 ctgtgcttca gaaactggct gctctctctg accataaccc cagtgctcct cgaaattcaa
3901 gaaactttgt ctttcataca ctttctcctg tcaaggctga ggcggcaaag gaatcgtcta
3961 agtctcaggt aaagaaaagg ggtccatctt tcatgacttc tccttcacct aagcacctca
4021 aaacagatga tagcacttca ggattgacgc gaagcatctt caaatatttg gagagctaac
4081 accatcaaag gtgccaaaat ctacattgag actgctttga gaagtttcta gcactgaaag
4141 ttggaattga cactccagcc aatgatcctt ccttctttca taatcaatgc aataagattg
4201 cagacagaaa ttccagtgat ttctactgca cagctctgga catctctttt cctagtatta
4261 ttccctgaat tggccactga
//