LOCUS BC137215 1227 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens YY2 transcription factor, mRNA (cDNA clone MGC:168835
IMAGE:9021212), complete cds.
ACCESSION BC137215
VERSION BC137215.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1227)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1227)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: i Column: 18.
FEATURES Location/Qualifiers
source 1..1227
/db_xref="H-InvDB:HIT000501170"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168835 IMAGE:9021212"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCTTCTGC"
gene 1..1227
/gene="YY2"
/gene_synonym="ZNF631"
/db_xref="GeneID:404281"
/db_xref="HGNC:HGNC:31684"
/db_xref="MIM:300570"
CDS 55..1173
/gene="YY2"
/gene_synonym="ZNF631"
/codon_start=1
/product="YY2 transcription factor"
/protein_id="AAI37216.1"
/db_xref="GeneID:404281"
/db_xref="HGNC:HGNC:31684"
/db_xref="MIM:300570"
/translation="MASNEDFSITQDLEIPADIVELHDINVEPLPMEDIPTESVQYED
VDGNWIYGGHNHPPLMVLQPLFTNTGYGDHDQEMLMLQTQEEVVGYCDSDNQLGNDLE
DQLALPDSIEDEHFQMTLASLSASAASTSTSTQSRSKKPSKKPSGKSATSTEANPAGS
SSSLGTRKWEQKQMQVKTLEGEFSVTMWSPNDNNDQGAVGEGQAENPPDYSEYLKGKK
LPPGGLPGIDLSDPKQLAEFTKVKPKRSKGEPPKTVPCSYSGCEKMFRDYAAMRKHLH
IHGPRVHVCAECGKAFLESSKLRRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHLRI
HTGDKPFVCPFDVCNRKFAQSTNLKTHILTHVKTKNNP"
BASE COUNT 335 a 345 c 311 g 236 t
ORIGIN
1 gcgttctttt tcccacggtc ttcccgttgc cgctaaccta actaactctc agccatggcc
61 tccaacgaag atttctccat cacacaagac ctggagatcc cggcagatat tgtggagctc
121 cacgacatca atgtggagcc ccttcctatg gaggacattc cgacggaaag cgtccagtac
181 gaggatgtgg atggcaattg gatctacggt ggccacaacc atccgccatt gatggtgttg
241 cagccgctct tcacgaacac gggctatggc gaccacgacc aggaaatgct tatgttgcag
301 acacaagagg aagtggtggg ctattgcgac tcagacaacc agctaggcaa cgacttggag
361 gaccagttgg ccctcccgga tagcattgaa gacgagcact tccagatgac cctggcctct
421 ctgtcggcct cggcggcatc aacatcaaca tcaacccaga gccgcagcaa aaagcccagc
481 aaaaagccca gcggcaagag tgccaccagc actgaggcca acccggcagg cagcagctcc
541 agcctgggca cgaggaagtg ggagcagaag caaatgcagg tcaaaacgct ggagggtgag
601 ttttccgtga ctatgtggtc ccctaacgat aacaatgacc aaggggcagt gggtgaaggc
661 caggctgaaa acccacctga ttattccgag tacttgaaag ggaagaaact tcctcctggg
721 gggttaccag gcattgatct ctcagatcct aaacagctgg cagaatttac taaagtgaag
781 cccaaaaggt ccaaaggaga acctcccaaa acagtccctt gctcttatag cggctgcgaa
841 aagatgttcc gggattacgc cgccatgaga aaacatctcc acatccacgg gcccagagtc
901 cacgtatgtg cagaatgtgg caaagctttt cttgagagct caaagctgag acgacaccag
961 ctggtccaca ccggcgagaa gccctttcag tgcacattcg aaggctgcgg gaaacgcttt
1021 tcccttgatt tcaatttgcg cacacacttg cgcatccaca ccggcgataa gcccttcgtg
1081 tgccccttcg atgtttgcaa caggaagttc gctcagtcaa ccaacctgaa aacccacata
1141 ttaacgcatg tgaagaccaa aaacaacccg tgaaaaggag aagacccctc tcagacttgg
1201 gaattatctt ccaggactgc ggtaggg
//