LOCUS BC137186 1459 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ataxin 3-like, mRNA (cDNA clone MGC:168806
IMAGE:9021183), complete cds.
ACCESSION BC137186
VERSION BC137186.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1459)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1459)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: h Column: 13.
FEATURES Location/Qualifiers
source 1..1459
/db_xref="H-InvDB:HIT000501144"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168806 IMAGE:9021183"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CTCCCAAG"
gene 1..1459
/gene="ATXN3L"
/gene_synonym="MJDL"
/db_xref="GeneID:92552"
/db_xref="HGNC:HGNC:24173"
CDS 200..1267
/gene="ATXN3L"
/gene_synonym="MJDL"
/codon_start=1
/product="ATXN3L protein"
/protein_id="AAI37187.1"
/db_xref="GeneID:92552"
/db_xref="HGNC:HGNC:24173"
/translation="MDFIFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEE
RMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKL
GIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAY
SVFVVKGDLPDCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDE
SGTSDQDEEDFQRALELSRQETNREDEHLRSTIELSMQGSSGNTSQDLPKTSCVTPAS
EQPKKIKEDYFEKHQQEQKQQQQQSDLPGHSSYLHERPTTSSRAIESDLSDDISEDTV
QAAVDTILEIMRKNLKIKGEK"
BASE COUNT 514 a 283 c 296 g 366 t
ORIGIN
1 tggcaaaacc accttggtca caatagtgct ttgtgacata ccatctctta cctgaatacc
61 tgcaaaaacc catggtcttc ataaggtttg aaaacctaac atctgttaca tggctatcca
121 caaactgccc aggtaactgc catagctggg catacaacat cttccggcat acctacagaa
181 actcacggat acaattaaca tggatttcat ctttcatgag aaacaggaag gtttcctgtg
241 tgctcagcac tgtctgaaca atctattgca aggagaatat tttagccctg tggaattagc
301 ctcaattgca catcagctag atgaagaaga gaggatgaga atggcagaag gaggagtcac
361 cagtgaagag tatcttgcat ttttacagca gccttcagaa aacatggatg ataccggttt
421 cttctccatt caggtaataa gcaatgcctt gaagttctgg ggtttagaga tcatccattt
481 caataatcct gaatatcaga agctcggcat tgatcctata aatgaaagat cttttatatg
541 taattataaa caacactggt ttactattag aaaatttgga aaacactggt ttaacttgaa
601 ttctctcttg gcgggtccag aattaatatc agatacatgc cttgcaaatt tcttggctcg
661 attacaacaa caagcatatt ctgtatttgt tgtcaagggt gatctgccag actgtgaagc
721 tgaccaactc ctgcagatca tcagtgtcga agagatggat acaccaaaac ttaatggaaa
781 aaaattagta aaacaaaaag agcatagagt ctataaaaca gtccttgaaa aagtatcaga
841 agaaagtgat gagtctggaa catcagacca agatgaggag gattttcaga gggcccttga
901 actaagccgc caagaaacca atagagaaga tgaacatctc cgcagtacta ttgagttaag
961 catgcaaggt agttccggaa acacatcgca agatcttcca aagacatcat gtgtaactcc
1021 tgcttcagaa cagccgaaga aaataaaaga agactatttt gaaaagcatc agcaggaaca
1081 gaagcagcag caacaacagt cagatctgcc gggccacagt tcatacctac acgaaaggcc
1141 aacaacaagt tcgagagcaa ttgagagtga tctcagtgat gacatcagtg aagacacagt
1201 acaggccgct gtcgacacca ttttagaaat tatgagaaag aatttgaaaa tcaaagggga
1261 aaaataatgc ctttaaaaat aatttagata gtcatacttt ccaacattat cctgtgtgat
1321 tatactgtag gatccatttt ggtcatctgt caaagagatg aggaaataag gcttttagac
1381 agtttgcaaa caaaatgacg agagagatgt gggactaaat aatgatcgtt caactactag
1441 ccaaggagac attcagcaa
//