LOCUS BC137129 4520 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens solute carrier family 6 (neurotransmitter transporter,
taurine), member 6, mRNA (cDNA clone MGC:168749 IMAGE:9021126),
complete cds.
ACCESSION BC137129
VERSION BC137129.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4520)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4520)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: f Column: 4.
FEATURES Location/Qualifiers
source 1..4520
/db_xref="H-InvDB:HIT000501095"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168749 IMAGE:9021126"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_313"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: GAGAACAA"
gene 1..4520
/gene="SLC6A6"
/gene_synonym="TAUT"
/db_xref="GeneID:6533"
/db_xref="HGNC:HGNC:11052"
/db_xref="MIM:186854"
CDS 269..2131
/gene="SLC6A6"
/gene_synonym="TAUT"
/codon_start=1
/product="solute carrier family 6 (neurotransmitter
transporter, taurine), member 6"
/protein_id="AAI37130.1"
/db_xref="GeneID:6533"
/db_xref="HGNC:HGNC:11052"
/db_xref="MIM:186854"
/translation="MATKEKLQCLKDFHKDILKPSPGKSPGTRPEDEAEGKPPQREKW
SSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFFLEIIIG
QYTSEGGITCWEKICPLFSGIGYASVVIVSLLNVYYIVILAWATYYLFQSFQKELPWA
HCNHSWNTPHCMEDTMRKNKSVWITISSTNFTSPVIEFWERNVLSLSPGIDHPGSLKW
DLALCLLLVWLVCFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRGLTLPGAGAGIKF
YLYPDITRLEDPQVWIDAGTQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLLGCLNS
GTSFVSGFAIFSILGFMAQEQGVDIADVAESGPGLAFIAYPKAVTMMPLPTFWSILFF
IMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAFVCSISYLLGLTMVTEG
GMYVFQLFDYYAASGVCLLWVAFFECFVIAWIYGGDNLYDGIEDMIGYRPGPWMKYSW
AVITPVLCVGCFIFSLVKYVPLTYNKTYVYPNWAIGLGWSLALSSMLCVPLVIVIRLC
QTEGPFLVRVKYLLTPREPNRWAVEREGATPYNSRTVMNGALVKPTHIIVETMM"
BASE COUNT 1030 a 1148 c 1195 g 1147 t
ORIGIN
1 gacacgcgag gtcaggaaga agccgcttat aaattaccgc ttccttcgcg ccgccgccaa
61 cgccgagccc cgaggaccgc aagcccagag gacaagctgc gccaagaggg agtgcggagc
121 gttcacccag cgggtcagag agcgagcggg caggcagccc ccggccggcg gaacccggca
181 cagccgagca gagcgcgggc ggcgccgcag ccaccccaga tccagaacca gaaccacagc
241 ccttctgagg agctcccaaa ccaaggagat ggccaccaag gagaagctgc agtgtctgaa
301 agatttccac aaggacatcc tgaagccctc accagggaag agcccaggca cgcggcctga
361 ggacgaggct gagggaaaac ctccgcagag ggagaagtgg tctagcaaga tcgactttgt
421 gctctctgtg gctggcggct tcgtgggctt gggcaacgtc tggcgcttcc cgtacctctg
481 ctacaagaat ggtggaggtg cgtttctcat accgtatttt attttcctgt ttgggagcgg
541 cctgcctgtg tttttcttgg agatcatcat aggccagtac acctctgaag ggggcatcac
601 ctgctgggaa aagatctgcc ccttgttctc tggtatcggc tatgcctccg ttgtaattgt
661 gtccctcctg aatgtctact acatcgtcat cctggcctgg gccacatact acctgttcca
721 gtccttccag aaggagctgc cctgggcaca ctgcaaccac agctggaaca cacctcactg
781 catggaggac accatgcgca agaacaagag tgtctggatc accatcagct ccaccaactt
841 cacctcccct gtcatcgagt tctgggagcg caacgtgctg agcttgtccc ctggaatcga
901 ccacccaggc tctctgaaat gggacctcgc tctctgcctt cttttagtct ggctagtgtg
961 tttcttctgc atctggaagg gcgtcaggtc cactgggaag gtcgtctact tcacagccac
1021 ttttccattc gccatgctcc tggtgctgct ggtccgaggg ctgacgctgc cgggcgcggg
1081 cgcaggcatc aagttctatc tgtatcctga catcacccgc cttgaggacc cacaggtgtg
1141 gattgacgct gggactcaga tattcttctc ttatgccatc tgcctggggg ctatgacctc
1201 gctggggagc tacaacaagt acaagtataa ctcgtacagg gactgtatgc tgctgggatg
1261 cctgaacagt ggtaccagtt ttgtgtctgg cttcgcaatt ttttccatcc tgggcttcat
1321 ggcacaagag caaggggtgg acattgctga tgtggctgag tcaggtcctg gcctggcctt
1381 cattgcctac ccaaaagctg tgacaatgat gccgctgccc acattttggt ccattctttt
1441 ttttattatg cttctcttgc ttggactgga tagccagttt gttgaagttg aaggacagat
1501 cacatccttg gttgatcttt acccatcctt cctaaggaag ggttatcgtc gggaaatctt
1561 catcgccttc gtgtgtagca tcagctacct gctggggctg acgatggtga cggagggtgg
1621 catgtatgtg tttcagctct ttgactacta tgcagctagc ggtgtatgcc ttttgtgggt
1681 tgcattcttt gaatgttttg ttattgcctg gatatatgga ggtgataacc tttatgatgg
1741 tattgaggac atgattggct atcggcccgg gccctggatg aagtacagct gggctgtgat
1801 cactccagtt ctctgtgttg gatgtttcat cttctcgctc gtcaagtacg tacccctgac
1861 ctacaacaaa acatacgtgt accccaactg ggccattggg ctgggctgga gcctggccct
1921 ttcctccatg ctctgcgttc ccttggtcat cgtcatccgc ctctgccaga ctgaggggcc
1981 gttccttgtg agagtcaagt acctgctgac cccaagggaa cccaaccgct gggctgtgga
2041 gcgcgaggga gccacacctt acaactctcg caccgtcatg aacggcgctc tcgtgaaacc
2101 gacccacatc attgtggaga ccatgatgtg agctctctcg ggtcgacggg gccggcggct
2161 ttcctgctgt ttactaacat tagattctca taggaccagg tttacagagc tttatatttg
2221 cactaggatt tttttttttt tgtaattgtc acagaaaatg taattgtggg tatgtgtgcg
2281 tgcgtgtgtg tgtgtgtgtg tgtgtatcgt gtgtgtgtgt tttgttttga tttgggggat
2341 attttgtaca aaaagaaaac ccacgggaag atgtccgtgg agaggcagag ctttcatact
2401 gaattagatg tattttatgg gaatttggta aatttttctt tgtatttttt tttttacata
2461 taagtatata tacacttaga gattgtcata tacttttacc acttgaattg atcttcttgc
2521 cagcaataga tctcattttc aaaagcaatt cttcggtgct gtgtagctgg cagaaagttc
2581 tgtccagtaa acgcaggatg gaattttcct gggactctac acccatctta aggtggtata
2641 ccttccaaat cctggttcag atggaagaaa tagcaggaga gaggacccat tagctggcag
2701 acccaggggg aagaaaggag ggctgtgagg agatacctca ttaaacttgg cttagtgaag
2761 aagagagatg ccaaaggaat gaaccaaccc ttcacataaa ggagactggc tgaagctgaa
2821 tgaggaggcc ctatagcaga agtctgattc taagagcagt agaaacttgt accagaagca
2881 aaatcccact tttaattttg agatggtgag tggatagtca gtagaccgtc agaaccactg
2941 gccagagagg gagctgctag agatccaaga aggctggcag gaatgaggct cacaactcag
3001 cctcgcaaga ggtggcagag gcacaggagg ccacagtcct tcctggggca ttccaggcag
3061 agaaggagca gaggctctcc cggcaggagc tggggtctca gggctcagat gagtctgttg
3121 catttgaatg gggtcatagc aggttctggt cattccccaa gcaacatctc agcatctctt
3181 aaagttgcct gcaggaatga agcatgacat acctgttgag ggactagggg agtggtgggg
3241 aggtgagtgg accaaaggat ataggcccca ggcatgcaga tgggcccggt gtcggggagg
3301 ggtgctttct ttcctcatct ccccactccc cactctcagc ctgggagact cctgccaagc
3361 cctcattaaa gatgccaccc tgggctgccc tggcacctag caaggcacac caagaacagc
3421 ttttgagtct gtatcctcca ctgggggaag tgctcccagt tcagaacaag ggcagcccgt
3481 ggtgctgacc taggatataa caaagctctt cacttcaaaa cccctgcaat agctgggttt
3541 acagacattt accacctgcg gacccaaaag agaaggccta ggagagtttt ctagaaggtt
3601 gggattgtca gggtcctggc ccctcagaac tggcttgatc aagggcctta tgtggagcag
3661 aggttgtctc tgaaccagga gagaaggtac tatacctttc aaatccccag ggcagacaca
3721 cccccaccca gcccctattt ggacctaaac tgtgccattt gaacagtcac ttccaagctc
3781 agtctaaatg aaaccgaaac gtgaccacgc acaaaggcag tcactgcctc gaggggtgca
3841 gaccgcagaa ttttcacagc aggggctctt ggaaccctgg aaaccccctt cttaaatttg
3901 ggaggaggag tatgcctttg gtgtccccct cccaaggggc aattctgaac cccatctttg
3961 gcaggcatac atatttcact gtttccaaag ctatctactc tgccaaacaa cacccagtcc
4021 tattccaaac tctcaacaat tctatcttgt tcctgttttt ctatgtattt atggttgcca
4081 tttgtgtctg atttgatttt actgtttttt ccctgatttt atggagtagc attgtgacct
4141 gttttccttt gtcttatata actttagtaa actaaccact gtcaatgatt gagggcaggt
4201 ggcacgtggg gaagagggga cttggcacgc agtggctacc tgggcatttg tggtcatttc
4261 agtttccatc tccccagcgg gggctccctg ggtgaaaggc cacagtattt tgggttggta
4321 ggcaaattgc aacattctgg acatggcctg aggaaggcct cttcttataa gattctcaga
4381 ccaaattcta gaccaaagac acatgcagac caagtcccca ggccccgcct ggaaggaagt
4441 cgttcctcaa ctctccccaa ggcacctgtc tccaatcaga gccctctcgc ccagccagcc
4501 ctggctctgt gtgcagagca
//