LOCUS BC137125 4361 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens chromosome 1 open reading frame 9, mRNA (cDNA clone
MGC:168745 IMAGE:9021122), complete cds.
ACCESSION BC137125
VERSION BC137125.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4361)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4361)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: e Column: 24.
FEATURES Location/Qualifiers
source 1..4361
/db_xref="H-InvDB:HIT000501091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168745 IMAGE:9021122"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_313"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TGAGCTTC"
gene 1..4361
/gene="C1orf9"
/gene_synonym="CH1"
/db_xref="GeneID:51430"
/db_xref="HGNC:HGNC:1240"
CDS 105..3869
/gene="C1orf9"
/gene_synonym="CH1"
/codon_start=1
/product="chromosome 1 open reading frame 9"
/protein_id="AAI37126.1"
/db_xref="GeneID:51430"
/db_xref="HGNC:HGNC:1240"
/translation="MKKHRRALALVSCLFLCSLVWLPSWRVCCKESSSASASSYYSQD
DNCALENEDVQFQKKDEREGPINAESLGKSGSNLPISPKEHKLKDDSIVDVQNTESKK
LSPPVVETLPTVDLHEESSNAVVDSETVENISSSSTSEITPISKLDEIEKSGTIPIAK
PSETEQSETDCDVGEALDASAPIEQPSFVSPPDSLVGQHIENVSSSHGKGKITKSEFE
SKVSASEQGGGDPKSALNASDNLKNESSDYTKPGDIDPTSVASPKDPEDIPTFDEWKK
KVMEVEKEKSQSMHASSNGGSHATKKVQKNRNNYASVECGAKILAANPEAKSTSAILI
ENMDLYMLNPCSTKIWFVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRYPTNKW
IKLGTFHGRDERNVQSFPLDEQMYAKYVKMFIKYIKVELLSHFGSEHFCPLSLIRVFG
TSMVEEYEEIADSQYHSERQELFDEDYDYPLDYNTGEDKSSKNLLGSATNAILNMVNI
AANILGAKTEDLTEGNKSISENATATAAPKMPESTPVSTPVPSPEYVTTEVHTHDMEP
STPDTPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSPWFESETQIFCSELTTIC
CISSFSEYIYKWCSVRVALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLS
GELENTNIEREAETVVLGDLSSSMHQDDLVNHTVDAVELEPSHSQTLSQSLLLDITPE
INPLPKIEVSESVEYEAGHIPSPVIPQESSVEIDNETEQKSESFSSIEKPSITYETNK
VNELMDNIIKEDVNSMQIFTKLSETIVPPINTATVPDNEDGEAKMNIADTAKQTLISV
VDSSSLPEVKEEEQSPEDALLRGLQRTATDFYAELQNSTDLGYANGNLVHGSNQKESV
FMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAEEQD
QRQTEAIQLLQAQLTNMTQLVSNLSATVAELKREVSDRQSYLVISLVLCVVLGLMLCM
QRCRNTSQFDGDYISKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLMRSKSLQLTGKE
VDPNDLYIVEPLKFSPEKKKKRCKYKIEKIETIKPEEPLHPIANGDIKGRKPFTNQRD
FSNMGEVYHSSYKGPPSEGSSETSSQSEESYFCGISACTSLCNGQSQKTKTEKRALKR
RRSKVQDQGKLIKTLIQTKSGSLPSLHDIIKGNKEITVGTFGVTAVSGHI"
BASE COUNT 1439 a 810 c 903 g 1209 t
ORIGIN
1 gtcacattct cgcgctcctg ctccggctcc tccatcttgg cctcggcagt ggcggctgcc
61 gggaggatgt gccgccttct ggcaggggga agaaggagga gaagatgaag aagcaccggc
121 gggccttggc cctggtctcc tgcctctttc tgtgctctct ggtctggctt cccagctggc
181 gtgtatgttg taaagagagt tcttcagctt cagcgtcatc atattactct caagatgaca
241 actgcgcact agaaaatgaa gatgtacaat tccagaaaaa ggatgaaaga gagggaccta
301 tcaatgccga atcattggga aaatcaggtt caaatttacc tatttctcca aaagaacata
361 aattaaaaga tgattctatt gtggatgtac aaaatacaga gtcaaaaaag ttaagtccac
421 cggtggtgga gacactccct acagttgatt tgcatgaaga gtcttccaat gcagttgtgg
481 acagtgaaac tgttgaaaat atttccagct catctacctc agaaatcact ccaatctcaa
541 agcttgatga aatagaaaaa tctggtacta ttccgatagc caaaccaagt gaaactgagc
601 agtctgaaac tgattgtgat gttggtgagg cccttgatgc tagtgctcca attgaacaac
661 cttcctttgt cagtccacct gacagccttg ttggccagca tatagaaaat gtatcatctt
721 cacatggtaa aggaaagata acaaaatcag aatttgaatc aaaagtttca gcaagtgaac
781 agggcggtgg tgatccaaaa tctgcattga atgcttcaga taatttaaaa aatgagagct
841 ctgattatac aaaaccagga gacattgacc ctacatcagt agcaagtccc aaagatccag
901 aagatatacc aacatttgat gaatggaaga agaaagttat ggaagtagaa aaagaaaaaa
961 gtcagtcgat gcatgcatct tctaatggag gttcacatgc caccaaaaag gtccagaaaa
1021 atcgaaataa ttatgcctca gtagaatgtg gtgccaaaat tctagcagct aatccagaag
1081 ccaagagcac atctgctatt cttatagaaa atatggatct ttacatgttg aatccttgca
1141 gcactaaaat ttggtttgtt attgaacttt gtgaaccaat tcaagtaaaa cagcttgata
1201 ttgcaaatta tgaattattt tcttctactc ctaaagattt tctggtttct atcagtgaca
1261 gatatccaac aaataagtgg attaagctgg gtacttttca tggtagagat gagcggaatg
1321 tacagagttt ccctttagat gaacagatgt atgcaaaata tgtcaagatg ttcatcaagt
1381 acataaaggt tgagttgcta tcacattttg gatcagagca cttttgtcca ttaagcctta
1441 taagggtatt tggcactagc atggtggaag aatatgaaga aattgctgat tcccagtatc
1501 actcagaacg ccaggaacta tttgatgagg actatgatta tccactggat tataatactg
1561 gagaggataa atcctcaaaa aatcttcttg gttctgctac aaatgccatt ctaaatatgg
1621 tgaatattgc tgctaatatt ctgggagcaa aaactgaaga cctgacagaa ggaaataaaa
1681 gtatatctga gaatgccact gccacagctg cacctaaaat gcctgaatca actcctgttt
1741 caactcctgt tccatctcct gagtatgtaa ccactgaagt acacacacat gacatggagc
1801 cgtcaacacc agatactcca aaagagagtc ccattgtaca gttagttcaa gaggaggaag
1861 aggaggcaag tccatctaca gtgacccttc tgggcagcgg tgaacaggaa gatgaatcat
1921 caccctggtt tgagtcagag acacaaatat tttgcagtga actgaccaca atttgttgta
1981 tttctagttt ttcagaatac atatataaat ggtgttcagt tagagttgct ctttatcggc
2041 agcgcagccg aactgctttg agtaaaggaa aagattatct tgtgttagct caaccaccct
2101 tactacttcc tgcggaatca gtagatgttt cagtattgca acctctgagt ggagaattgg
2161 aaaatacgaa tatagaaagg gaagctgaaa ctgttgttct gggtgattta agtagtagta
2221 tgcaccagga tgacttggtg aatcacactg tagatgcagt tgaacttgaa ccaagccatt
2281 ctcaaactct ttctcagtct cttcttttag atattacccc agaaatcaat cccttgccta
2341 aaatagaagt atctgagtct gttgaatatg aggcaggaca tataccatca ccagtgattc
2401 cccaagagag ttctgttgag atcgataatg aaacagaaca aaagtctgag agctttagtt
2461 ctatagagaa accatctatt acctatgaaa caaataaagt taatgagtta atggataata
2521 ttataaaaga agatgtgaac tccatgcaaa ttttcacaaa gctgtctgaa acaatagtgc
2581 caccaataaa tacagccact gtacccgaca atgaagatgg ggaagccaaa atgaatatag
2641 ctgacacagc aaagcaaact ttgatttctg ttgtggattc ttcttcatta cctgaagtaa
2701 aagaagaaga acagtctcca gaagatgccc ttttgagagg gttacagagg acagctacag
2761 atttttatgc tgaattgcaa aattctacag atctaggata tgctaatgga aatcttgtac
2821 atggatcaaa ccaaaaggag tcagtattta tgagacttaa taatcgtatt aaagccttag
2881 aagttaacat gtctctcagt ggtcgctatc tggaggagct tagccaaagg taccgaaaac
2941 aaatggaaga aatgcaaaag gctttcaata aaacaatcgt gaaacttcag aatacttcaa
3001 gaatagcaga ggagcaggat cagcggcaaa ctgaagccat ccagttgcta caggcacagc
3061 tgaccaacat gacacagctt gtttcaaatt tatcagcaac agtagcagaa ttgaaacggg
3121 aggtttcaga tcgacaaagc tatcttgtca tatctttggt tctttgtgtt gtcttgggac
3181 tgatgctttg tatgcagcgt tgtcgaaata cttctcaatt tgatggagat tatatttcaa
3241 aacttcctaa aagtaatcag tatccaagcc ctaaaaggtg tttctcttcc tatgatgata
3301 tgaatttgaa aagaagaact tcattcccac tcatgagatc caagtctcta cagttaactg
3361 gcaaagaagt agacccaaat gatttgtaca ttgtagaacc cctcaagttt tctccagaaa
3421 agaagaagaa gcgctgcaag tacaaaattg aaaaaattga gaccataaag cctgaagaac
3481 cattgcaccc catagccaat ggcgacataa aaggaagaaa gccctttacg aaccagagag
3541 atttttctaa tatgggagaa gtttatcact cttcttataa aggtcctcca tctgaaggaa
3601 gctcagaaac ttcatcacag tcagaagagt cctatttttg tggcatttca gcttgcacaa
3661 gtctgtgcaa tggacagtct caaaagacaa aaactgagaa gagggcttta aaacgaagac
3721 gatctaaagt ccaagaccaa ggaaaattga taaaaactct aatacagact aagtcgggat
3781 cattgccgag cctgcatgac ataatcaaag gaaacaaaga gatcaccgtg ggaacatttg
3841 gtgttacagc agtctcggga catatctaaa attaattgaa cttttcatac agaagacttt
3901 tttgttgttg ttctttgaag aacagtctgt agtatttgaa gggtttgggg gagggagaaa
3961 atattaatgg gaaaggcatt cagaaattat ggtttctacc tttttaaaaa gtagatggga
4021 ttgtgtcaat cttggttaat gagctacagt tttacaaagc tgatcacttc ctataaggac
4081 aatggtagac attttataaa gatgtttttt cacaagatta attactggga caaaagtaat
4141 ttggaagccc agttccttag gtgggatagg aatgaaagcc taaacctctt cctttagctt
4201 tgttcctatt tcttgcacct tcccatattt atgtgccttt tgtctattta taatgccact
4261 ggaagaggag ggataacttt ttctgttatt tgatttcttt tataactttg ttaggttttt
4321 gaagctgcaa acactacaat gctttgaggg ggtctgtgcc t
//