LOCUS BC137106 1118 bp mRNA linear HUM 30-JUN-2008
DEFINITION Homo sapiens early B-cell factor 2, mRNA (cDNA clone
IMAGE:9021103), complete cds.
ACCESSION BC137106
VERSION BC137106.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1118)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1118)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: e Column: 5
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1118
/db_xref="H-InvDB:HIT000501074"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9021103"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_299"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CTCTGCTA"
gene 1..1118
/gene="EBF2"
/gene_synonym="COE2"
/gene_synonym="EBF-2"
/gene_synonym="O/E-3"
/gene_synonym="OE-3"
/db_xref="GeneID:64641"
/db_xref="HGNC:HGNC:19090"
/db_xref="MIM:609934"
CDS 266..820
/gene="EBF2"
/gene_synonym="COE2"
/gene_synonym="EBF-2"
/gene_synonym="O/E-3"
/gene_synonym="OE-3"
/codon_start=1
/product="EBF2 protein"
/protein_id="AAI37107.1"
/db_xref="GeneID:64641"
/db_xref="HGNC:HGNC:19090"
/db_xref="MIM:609934"
/translation="MFGIQDTLGRGPTLKEKSLGAEMDSVRSWVRNVGVVDANVAAQS
GVALSRAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVENDKEQGNEK
TNNGTHYKLQLLYSNGVRTEQDLYVRLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMC
SRCCEKKSCGNRNETPSDPVIIDR"
BASE COUNT 284 a 257 c 297 g 280 t
ORIGIN
1 cgagcgacct agggtggagt ggctgaggcg gcagatctga acttgcggag gataagaacc
61 caaactttga ctacatcagt ccgcacctcg ccagtgaagc aaaggacggg ttatcttttt
121 tttttttcta agactcaaac ttgggcactt gatccctttt cttggattgc tttggaggag
181 acgatttgct ggcaacgttg ggaacagtca ggactgtgtt gtaactctta cttttaaagc
241 gacagtagag gatcagactt tttaaatgtt tggaattcaa gatactttag gaagaggacc
301 aactctgaaa gagaaatcgc tgggcgcgga gatggattcg gtcaggtcct gggtccggaa
361 tgtcggagtg gtggacgcta atgtcgccgc gcagagcggg gtcgccctgt cccgggccca
421 ctttgagaaa cagcctcctt ccaacttgag gaaatccaac ttctttcact tcgtcctggc
481 gctctatgac aggcagggcc agccggtgga gatcgagcgg acggccttcg tggactttgt
541 ggagaatgac aaagaacaag gcaacgagaa gaccaacaac ggcactcact acaagttaca
601 gctcctctac agcaacggtg tccgcacgga acaggacctc tatgtcaggc tcatcgactc
661 ggtcaccaag cagcccatcg cttacgaggg acagaataag aatccggaaa tgtgccgagt
721 tctcctgacg cacgaagtga tgtgtagtcg atgctgcgaa aagaaaagct gtggaaaccg
781 aaatgagact ccatcggacc cagtcataat tgacaggtag ggggaaaaag tgatttttca
841 atcatttttg gttccttttc ttcatgaacc tcaactctga gtactgatcc atggagcttt
901 gctgtcaagt tggtttcatg ttatttcaag tcactaaggt catccaacaa aggcctcctc
961 atgctggcct ttcttggaag aagccagaat cttcctttgg aacacgtgtc tctaaatctg
1021 tggtggagtc ttttccaggt gcaccagctt cagcctaata agtagtatgt gtggtgcagg
1081 atataagcga tggcacctct cctttcgggc agggtatg
//