LOCUS BC137069 2262 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens zinc finger protein 12, mRNA (cDNA clone MGC:168689
IMAGE:9021066), complete cds.
ACCESSION BC137069
VERSION BC137069.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2262)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2262)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 672 Row: c Column: 16.
FEATURES Location/Qualifiers
source 1..2262
/db_xref="H-InvDB:HIT000501041"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168689 IMAGE:9021066"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_298"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GTTGCCGA"
gene 1..2262
/gene="ZNF12"
/gene_synonym="GIOT-3"
/gene_synonym="HZF11"
/gene_synonym="KOX3"
/db_xref="GeneID:7559"
/db_xref="HGNC:HGNC:12902"
/db_xref="MIM:194536"
CDS 47..2140
/gene="ZNF12"
/gene_synonym="GIOT-3"
/gene_synonym="HZF11"
/gene_synonym="KOX3"
/codon_start=1
/product="zinc finger protein 12"
/protein_id="AAI37070.1"
/db_xref="GeneID:7559"
/db_xref="HGNC:HGNC:12902"
/db_xref="MIM:194536"
/translation="MNKSLGPVSFKDVAVDFTQEEWQQLDPEQKITYRDVMLENYSNL
VSVGYHIIKPDVISKLEQGEEPWIVEGEFLLQSYPDEVWQTDDLIERIQEEENKPSRQ
TVFIETLIEERGNVPGKTFDVETNPVPSRKIAYKNSLCDSCEKCLTSVSEYISSDGSY
ARMKADECSGCGKSLLHIKLEKTHPGDQAYEFNQNGEPYTLNEESLYQKIRILEKPFE
YIECQKAFQKDTVFVNHMEEKPYKWNGSEIAFLQMSDLTVHQTSHMEMKPYECSECGK
SFCKKSKFIIHQRTHTGEKPYECNQCGKSFCQKGTLTVHQRTHTGEKPYECNECGKNF
YQKLHLIQHQRTHSGEKPYECSYCGKSFCQKTHLTQHQRTHSGERPYVCHDCGKTFSQ
KSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHLRTHTGEKPYECNECGKFFSRLS
YLTVHYRTHSGEKPYECNECGKTFYLNSALMRHQRVHTGEKPYECNECGKLFSQLSYL
TIHHRTHSGVKPYECSECGKTFYQNSALCRHRRIHKGEKPYECYICGKFFSQMSYLTI
HHRIHSGEKPYECSECGKTFCQNSALNRHQRTHTGEKAYECYECGKCFSQMSYLTIHH
RIHSGEKPFECNECGKAFSRMSYLTVHYRTHSGEKPYECTECGKKFYHKSAFNSHQRI
HRRGNMNVIDVGRLL"
BASE COUNT 763 a 447 c 485 g 567 t
ORIGIN
1 gcctccgctt tcacagtcct ccagattttt ccaagagcag cagaaaatga ataaatccct
61 ggggccagtg tcattcaagg acgtggctgt ggacttcacc caggaggaat ggcagcagct
121 ggatcctgag cagaagataa cttacaggga tgtgatgctg gagaactaca gcaatctagt
181 ttctgtgggg tatcacatta tcaaaccgga tgttatcagc aagttggagc aaggagaaga
241 gccatggata gtagaaggag aattcctact tcagagctat ccagatgaag tctggcaaac
301 tgatgaccta atagagagaa tccaggaaga ggaaaataaa ccttcaaggc aaactgtgtt
361 cattgagacc ctgattgaag agagaggtaa tgttcctggt aaaacttttg atgtagaaac
421 gaaccctgtt ccttcaagaa aaatagccta taaaaatagc ctctgtgact catgtgaaaa
481 gtgtttaacg tctgtttcag aatatattag tagtgatgga agctatgcaa gaatgaaagc
541 tgatgaatgt agtggatgtg ggaaatcact cctccatatt aagcttgaga aaactcatcc
601 aggagatcaa gcttatgaat ttaatcaaaa tggggaacct tatactctaa atgaagaaag
661 tctttatcag aaaattcgta ttttggagaa accttttgaa tatattgaat gccagaaagc
721 cttccaaaag gacactgttt ttgttaatca catggaagaa aagccctata agtggaatgg
781 atctgaaata gcctttctcc agatgtcgga cctcactgta catcagacat ctcatatgga
841 aatgaagccc tatgaatgca gtgaatgtgg gaaatccttc tgtaaaaagt caaaatttat
901 tatacatcag aggactcaca caggagagaa accttacgaa tgtaatcagt gtgggaaatc
961 cttctgccag aagggaaccc ttactgtgca tcagagaaca cacacagggg agaagcccta
1021 tgaatgtaat gaatgtggga agaactttta ccagaagtta cacctcattc agcatcagag
1081 aactcactca ggagagaagc cctatgaatg tagttattgt ggaaaatcct tttgccagaa
1141 gacacacctc acacaacatc agagaacaca ttcaggagag agaccttatg tttgtcatga
1201 ctgtgggaaa accttctcgc agaagtcagc acttaatgac catcagaaaa ttcacacagg
1261 tgtgaaactc tacaagtgta gtgaatgtgg gaaatgcttc tgccgcaagt ctactctcac
1321 gacccacctg aggacccaca caggagagaa accgtatgaa tgtaatgagt gtggaaaatt
1381 cttctctcgg ttgtcatatc tcactgtaca ttatagaact cattcaggag agaaacccta
1441 tgaatgtaat gaatgtggaa aaaccttcta cctgaattca gccctcatga gacatcagag
1501 agtgcacaca ggagagaaac cttacgaatg taatgaatgt ggaaagttat tctcccagtt
1561 gtcatacctc actatccatc atagaactca ttcaggagta aaaccctatg aatgtagtga
1621 atgtgggaaa accttctacc agaactcagc cctttgtaga catcggagaa tacacaaagg
1681 agagaagccc tatgaatgct atatatgtgg aaaattcttc tctcagatgt catacctcac
1741 tatacatcat agaattcatt caggagagaa gccctatgaa tgtagtgaat gtgggaaaac
1801 cttctgccag aattcagccc ttaatcgaca tcagagaaca cacacaggag agaaagccta
1861 cgaatgttat gaatgtggga agtgcttctc tcagatgtcc tatctcacta tacatcatcg
1921 aattcattca ggagagaaac cctttgaatg taatgagtgt ggaaaagcct tctctcggat
1981 gtcatacctc actgtacatt atagaactca ttcaggagag aaaccctatg agtgtactga
2041 atgtggaaaa aaattctacc acaaatcagc attcaacagc catcagagaa ttcataggag
2101 aggcaatatg aatgtaatag atgtgggaag gcttctctga agtcagacct cattttatat
2161 cagagaaccc tttcagtata gtgaatcaga aactcctgcc tgaagtcaaa caccttgtac
2221 atcagagagt tcacacaggt tagtgtggac atccccttgt gt
//