LOCUS BC136960 2583 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens zinc finger protein 780B, mRNA (cDNA clone MGC:168575
IMAGE:9020952), complete cds.
ACCESSION BC136960
VERSION BC136960.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2583)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2583)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: E Column: 18
single stranded.
FEATURES Location/Qualifiers
source 1..2583
/db_xref="H-InvDB:HIT000500938"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168575 IMAGE:9020952"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TTCTCCTA"
gene 1..2583
/gene="ZNF780B"
/db_xref="GeneID:163131"
/db_xref="HGNC:HGNC:33109"
CDS 46..2547
/gene="ZNF780B"
/codon_start=1
/product="zinc finger protein 780B"
/protein_id="AAI36961.1"
/db_xref="GeneID:163131"
/db_xref="HGNC:HGNC:33109"
/translation="MVHGSVTFRDVAIDFSQEEWECLQPDQRTLYRDVMLENYSHLIS
LGSSISKPDVITLLEQEKEPWIVVSKETSRWYPDLESKYGPEKISPENDIFEINLPKH
VIKQISKTLGLEAFYFRNDSEYRSRFEGRQGHQEGYINQKIISYEEMPAYTHASPIHN
THKPYECKECGKYFSCGSNLIQHQSIHTGEKPYKCKECGKAFQLHIQLTRHQKFHTGE
KTFECKECGKAFNLPTQLNRHKNIHTVKKLFECKECGKSFNRSSNLTQHQSIHAGVKP
YQCKECGKAFNRGSNLIQHQKIHSNEKPFVCRECEMAFRYHYQLIEHCRIHTGEKPFE
CKECRKAFTLLTKLVRHQKIHMGEKPFECRECGKAFSLLNQLNRHKNIHTGEKPFECK
ECGKSFNRSSNLIQHQSIHADVKPYECKECGKGFNRGANLIQHQKIHSNEKPFVCREC
EMAFRYHYQLIQHCQIHTGGKPFECKECGKAFSLLTQLARHKNIHTGEKPFECKDCGK
AFNRGSNLVQHQSIHTGEKPYECKECGKAFRLHLQLSQHEKTHTGEKPFECKECGKFF
RRGSNLNQHRSIHTGKKPFECKECGKAFRLHMHLIRHQKFHTGEKPFECKECGKAFSL
HTQLNHHKNIHTGEKPFKCKECGKSFNRVSNLVQHQSIHAGVKPYECKECGKGFSRVS
NLIQHQKTHSSAKPFVCKECRKTFRYHYQLTEHYRIHTGEKPFECKECGKAFGLLTQL
AQHQIIHTGEKPFKCKECGKAFNRGSNLVQPQSIHTGEKPYECKECGKAFRLHLQLSL
HQKLVQVRNPLNVRNVGQPSDISSNLLNIRKFILG"
BASE COUNT 851 a 472 c 549 g 711 t
ORIGIN
1 gggagaagcc cgaggaagat tgaccaattt tgtaattcta gaaacatggt ccatggatca
61 gtgacattca gggatgtggc cattgacttc tctcaggagg agtgggagtg cctgcagcct
121 gatcagagga ccttgtacag ggatgtgatg ttggagaact acagccacct gatatcactg
181 ggaagttcca tttctaagcc agatgtgatt acattactag agcaagagaa agagccctgg
241 attgttgtaa gtaaagaaac aagcagatgg tatccagatt tggagtcaaa atatggacct
301 gagaaaatat ctccagaaaa tgatattttt gaaataaatt tacccaaaca tgttataaag
361 caaataagta aaacacttgg cctcgaggcc ttttatttta gaaatgactc agaatataga
421 agtagatttg agggacgaca gggacatcaa gaaggatata tcaaccagaa gatcatcagc
481 tatgaagaaa tgcctgctta tactcatgct tctcctattc ataatacaca taaaccatat
541 gaatgtaagg aatgtgggaa atactttagt tgtggttcaa atcttattca gcatcagagt
601 attcatactg gagagaaacc ctataaatgc aaagaatgtg ggaaagcctt tcaacttcac
661 atacaactta ctcgacatca gaaatttcat actggtgaga aaacttttga atgtaaggaa
721 tgtggaaaag cctttaatct tcccacccag cttaatcgcc ataagaacat tcacacagtt
781 aagaaactgt ttgaatgtaa ggaatgtggg aagtctttta atcgtagctc aaaccttact
841 cagcatcaaa gtattcatgc tggtgtaaaa ccatatcaat gtaaggagtg tgggaaagcc
901 tttaatcgtg gttcaaatct tattcagcat caaaaaattc attccaatga gaaacccttt
961 gtatgtaggg aatgtgagat ggcctttcga tatcattacc aactcattga acattgccga
1021 attcatactg gcgagaaacc ctttgaatgt aaagaatgca gaaaggcctt tactcttctg
1081 acaaagcttg ttcgacatca gaagattcat atgggtgaga agccctttga atgcagggaa
1141 tgcgggaagg cctttagtct cctcaatcag cttaatcgcc ataagaatat tcacacaggt
1201 gaaaaaccat ttgaatgtaa agaatgtggg aagtccttta atcgtagttc aaaccttatt
1261 caacaccaga gtattcatgc tgatgtaaaa ccatatgaat gtaaggagtg tgggaaaggc
1321 tttaatcgtg gtgcaaatct tattcagcat caaaaaattc attccaatga gaaacccttt
1381 gtatgtaggg aatgtgagat ggcctttcga tatcattacc aacttattca acattgccaa
1441 attcatactg gtgggaaacc ctttgaatgt aaagaatgtg gaaaggcctt tagtcttctg
1501 acacagcttg ctcgacataa gaacattcat actggtgaga aaccatttga atgtaaagac
1561 tgtgggaagg ccttcaatcg tggctcgaac cttgttcaac atcagagtat tcacactggt
1621 gagaagccct atgaatgtaa ggagtgtggg aaggctttta gacttcacct acaactttct
1681 caacatgaga aaactcatac aggtgagaaa ccctttgaat gtaaggaatg tgggaaattc
1741 tttcgtcgtg gttcaaatct taatcaacat cgaagtattc ataccggaaa gaaacccttt
1801 gaatgtaagg aatgtgggaa agcctttcga cttcatatgc accttattcg acatcagaaa
1861 tttcatactg gtgagaagcc ctttgaatgt aaggaatgtg gcaaggcctt cagtcttcac
1921 acccagctta atcaccataa gaacattcac acaggtgaga agccatttaa atgtaaagaa
1981 tgtgggaagt cctttaatcg tgtctcaaac cttgttcaac atcagagtat tcatgctggt
2041 gtaaaaccat atgaatgtaa ggagtgtggg aaaggcttta gtcgtgtttc aaaccttatt
2101 cagcatcaga aaactcattc cagtgcgaaa ccctttgtat gtaaggagtg taggaagacc
2161 tttagatatc attaccagct tactgaacat taccgaattc atactggtga gaaacccttt
2221 gaatgtaaag aatgcggaaa ggcctttggt cttctgacac agcttgctca acatcagatc
2281 attcatactg gtgagaagcc atttaaatgt aaggagtgtg ggaaggcctt taatcgtggc
2341 tcaaaccttg ttcaacctca gagtattcat actggtgaga aaccctatga atgtaaggag
2401 tgtgggaagg cttttagact tcacctacaa ctttctctgc atcaaaaact tgtacaggtg
2461 agaaaccctt tgaatgtaag aaatgtggga cagccttcag acatcagtag caacttactg
2521 aacatcagaa aattcatact tgggtgaaaa cctttgaatg taaggaatgt gggaaggcct
2581 ttc
//