LOCUS BC136862 1491 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens RNA binding motif protein, Y-linked, family 1, member
D, mRNA (cDNA clone MGC:168476 IMAGE:9020853), complete cds.
ACCESSION BC136862
VERSION BC136862.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1491)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1491)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 671 Row: j Column: 19
single stranded.
FEATURES Location/Qualifiers
source 1..1491
/db_xref="H-InvDB:HIT000500846_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168476 IMAGE:9020853"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AACATAGG"
gene 1..1491
/gene="RBMY1D"
/db_xref="GeneID:378949"
/db_xref="HGNC:HGNC:23915"
CDS 66..1445
/gene="RBMY1D"
/codon_start=1
/product="RBMY1D protein"
/protein_id="AAI36863.1"
/db_xref="GeneID:378949"
/db_xref="HGNC:HGNC:23915"
/translation="MVEADHPGKLFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRT
SKSRGFAFITFENPADAKNAAKDMNGKSLHGKAIKVEQAKKPSFQSGGRRRPPASSRN
RSPSGSLRSARGSRGGTRGWLPSQEGHLDDGGYTPDLKMSYSRGLIPVKRGPSSRSGG
PPPKKSAPSAVARSNSWMGSQGPMSQRRENYGVPPRRATISSWRNDRMSTRHDGYATN
DGNHPSCQETRDYAPPSRGYAYRDNGHSNRDEHSSRGYRNHRSSRETRDYAPPSRGHA
YRDYGHSRRDESYSRGYRNRRSSRETREYAPPSRGHGYRDYGHSRRHESYSRGYSYHD
GYGEALGRDHSEHLSGSSYRDALQRYGTSHGAPPARGPRMSYGGSTCHAYSNTRDRYG
RSWESYSSCGDFHYCDREHVCRKDQRNPPSLGRVLPDPREACGSSSYVASIVDGGESR
SEKGDSSRY"
BASE COUNT 451 a 296 c 379 g 365 t
ORIGIN
1 ggttacgtac ggcctgaggg ccaggcgaac ctcaggctct ttgtcctact aaaaagcgca
61 gcacaatggt agaagcagat catcctggca agcttttcat tggtggcctc aatagagaaa
121 ccaatgagaa gatgcttaaa gcagtatttg ggaaacatgg tcccatatca gaagttcttt
181 tgataaagga tcgaaccagc aaatccagag gctttgcatt tattactttt gagaaccctg
241 cagatgctaa gaatgctgcc aaagatatga atggaaagtc tttgcatgga aaagcaataa
301 aagtagaaca agccaagaaa ccatcttttc aaagtggtgg taggcggaga ccaccagctt
361 cttcgagaaa cagaagccct tcaggaagtc tgagatctgc aagaggaagc cgtggaggaa
421 caagagggtg gcttccctca caagaagggc acctggatga tggtggatac actcctgatc
481 tcaagatgag ttattctagg ggactcattc cagttaaaag aggtccatct tcaagaagtg
541 gaggtcctcc tccgaaaaaa tctgctcctt ctgctgtggc aagaagcaat agttggatgg
601 gaagccaagg tcccatgtca caaagaagag agaattatgg agttcctcca cgcagagcga
661 caatatcttc ctggagaaat gatcgcatgt caacaagaca tgatggttat gcaactaacg
721 atggaaatca tccaagttgc caagaaacga gggattatgc tccaccatct agaggctatg
781 cataccgtga taatggtcat tctaatcggg atgaacattc ctctagagga tatagaaatc
841 atcgaagttc ccgagaaact agggattatg ctccaccatc tagaggccat gcataccgtg
901 attatggtca ttctcgtcgg gatgaaagtt attctagagg atacagaaat cgtcgaagtt
961 cccgagaaac tagggagtat gctccaccat ctagaggcca tggataccgt gattatggtc
1021 attctcgtcg acatgaaagt tattctagag gatatagtta tcatgatggc tacggtgagg
1081 cccttggtag agatcattct gaacatctaa gtggaagttc ttatagagat gcacttcaga
1141 gatacgggac ctctcatggt gcaccacctg caagagggcc tcggatgtct tatggtggaa
1201 gcacctgcca cgcatatagt aatacacgag atagatatgg cagaagttgg gagagttact
1261 cgagctgtgg tgattttcat tattgtgatc gtgagcatgt ttgcagaaaa gaccaaagga
1321 atccgccttc tctgggtagg gtgctccctg atcctcgtga agcatgtggt agctcaagtt
1381 atgtggcatc tatagtagat ggtggggaga gtcgatctga aaaaggagac tcgagcagat
1441 attaaagcaa gcattgaaag taatagttat tgcataccaa tccttgtttg c
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