LOCUS BC136838 1360 bp mRNA linear HUM 16-JUN-2008
DEFINITION Homo sapiens transmembrane protein 220, mRNA (cDNA clone MGC:168452
IMAGE:9020829), complete cds.
ACCESSION BC136838
VERSION BC136838.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1360)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1360)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 671 Row: i Column: 19.
FEATURES Location/Qualifiers
source 1..1360
/db_xref="H-InvDB:HIT000500822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168452 IMAGE:9020829"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCTTCCCA"
gene 1..1360
/gene="TMEM220"
/db_xref="GeneID:388335"
/db_xref="HGNC:HGNC:33757"
CDS 45..527
/gene="TMEM220"
/codon_start=1
/product="transmembrane protein 220"
/protein_id="AAI36839.1"
/db_xref="GeneID:388335"
/db_xref="HGNC:HGNC:33757"
/translation="MAPALWRACNGLMAAFFALAALVQVNDPDAEVWVVVYTIPAVLT
LLVGLNPEVTGNVIWKSISAIHILFCTVWAVGLASYLLHRTQQNILHEEEGRELSGLV
IITAWIILCHSSSKNPVGGRIQLAIAIVITLFPFISWVYIYINKEMRSSWPTHCKTVI
"
BASE COUNT 370 a 284 c 314 g 392 t
ORIGIN
1 cgtacgtggc aggactcacc gccccgcgcc gcgttctccg agccatggcg ccagcgctgt
61 ggcgggcctg caacggactc atggccgcct tcttcgcgct ggcggccttg gtgcaggtaa
121 atgacccaga tgcagaggtg tgggtggtgg tgtacacaat ccctgcagta ctgaccctgc
181 ttgttggact taaccctgaa gtcacaggta atgttatttg gaaaagtatc tctgcaatac
241 acatactctt ttgtacggtg tgggctgttg gcttggcgtc ctacctcttg catcgtacac
301 aacagaacat cttacatgag gaagaaggca gggagctgtc tggtctggtg attattacag
361 catggattat cctgtgccac agttcctcaa agaatccagt tggtggaaga attcaattgg
421 ctattgccat tgtaatcaca cttttcccat ttatctcatg ggtctacata tatattaaca
481 aggaaatgcg gtcctcttgg ccaactcact gcaagacagt aatttaaata aattcaagaa
541 cttcgttttt aaaatgaata ttttcaatca attttttata aacattaggg gaacaagcca
601 ggagtttatt tcaggtaatt tgggctaata gagtttttta aaactccaaa taacttttta
661 agggtgcata taattcgatg taagattgga tgggacaagt aagagatggt ctgatatttt
721 ccagacgact ttctgcaggg tcttgtgtca taatgtagtg gaaaaggcta gagaatagaa
781 gtttaaaaat acgagttcta acttaacttt gtaactatgt aatttgggca aatatataaa
841 cctcctggtg gatatttatc tataaaatag gattaatgcc agatctactt acttacacag
901 taacaaggat caatctagat aatgtaagaa cactctgaag atataaagtg tttggaaaga
961 ttacggaggg ctgcccatga ttaaaataga ggggagcagg gattgggtaa tatactgaaa
1021 tagacattca agagagggct ataccccgat cttttttttt ttttttaaga cagtctcact
1081 ctgttgccca ggctggagtg cagtggcatg atcatggctc actgcagtcc tgacctcccg
1141 gggctcaggt gatcctccta cctcagcctc ccaagaagct acgactacaa gtgtgcacca
1201 ccatgcccgg ctaaattttt ttaaattttt tgtagaggca gggtttcacc gtgttgtcca
1261 ggctggtctt gaattcctga gttcaagcga tctgtccacc ttggcctccc aaagtgctgg
1321 gattacaggt gtgagccacc atgcccagtc cagccctaaa
//