LOCUS BC136832 1691 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens 5'-nucleotidase domain containing 1, mRNA (cDNA clone
MGC:168446 IMAGE:9020823), complete cds.
ACCESSION BC136832
VERSION BC136832.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 671 Row: i Column: 13.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000500817"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168446 IMAGE:9020823"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GATATTCT"
gene 1..1691
/gene="NT5DC1"
/gene_synonym="C6orf200"
/gene_synonym="LP2642"
/db_xref="GeneID:221294"
/db_xref="HGNC:HGNC:21556"
CDS 55..1422
/gene="NT5DC1"
/gene_synonym="C6orf200"
/gene_synonym="LP2642"
/codon_start=1
/product="5'-nucleotidase domain containing 1"
/protein_id="AAI36833.1"
/db_xref="GeneID:221294"
/db_xref="HGNC:HGNC:21556"
/translation="MAQHFSLAACDVVGFDLDHTLCRYNLPESAPLIYNSFAQFLVKE
KGYDKELLNVTPEDWDFCCKGLALDLEDGNFLKLANNGTVLRASHGTKMMTPEVLAEA
YGKKEWKHFLSDTGMACRSGKYYFYDNYFDLPGALLCARVVDYLTKLNNGQKTFDFWK
DIVAAIQHNYKMSAFKENCGIYFPEIKRDPGRYLHSCPESVKKWLRQLKNAGKILLLI
TSSHSDYCRLLCEYILGNDFTDLFDIVITNALKPGFFSHLPSQRPFRTLENDEEQEAL
PSLDKPGWYSQGNAVHLYELLKKMTGKPEPKVVYFGDSMHSDIFPARHYSNWETVLIL
EELRGDEGTRSQRPEESEPLEKKGKYEGPKAKPLNTSSKKWGSFFIDSVLGLENTEDS
LVYTWSCKRISTYSTIAIPSIEAIAELPLDYKFTRFSSSNSKTAGYYPNPPLVLSSDE
TLISK"
BASE COUNT 514 a 350 c 356 g 471 t
ORIGIN
1 cagctccttg cacccttcgc ggccgaggcg ctccctggtg ctccccgcgc agccatggct
61 cagcacttct ccctggccgc ctgcgacgtg gtcggattcg acctggacca cactctgtgt
121 cgctacaacc tgcccgagag cgccccgctc atttataata gctttgccca gttcctagtt
181 aaggagaaag ggtacgataa ggaattgctc aatgtgaccc cagaggattg ggatttctgt
241 tgcaaaggtt tggcattgga tctagaagat gggaacttcc ttaaacttgc aaataatggc
301 actgttctca gggcaagcca tggcaccaag atgatgactc cagaggtgct ggcagaggca
361 tatggcaaga aagagtggaa gcacttcttg tcggacactg gaatggcttg ccgctcagga
421 aagtattact tttacgacaa ctactttgac ctgccaggag ctcttctgtg tgccagggtg
481 gtggactatt taacaaaact gaacaatggt caaaaaacat ttgatttttg gaaggatata
541 gttgctgcta tacaacacaa ttataaaatg tcagctttta aggaaaactg tggaatatat
601 tttccagaaa taaaaagaga tccaggcaga tatttacata gttgtcctga atctgtgaaa
661 aaatggcttc gacagctaaa gaatgctggg aaaattcttc tgttaattac cagttctcac
721 agtgattact gtagacttct ctgcgaatat attcttggga atgattttac agaccttttt
781 gacattgtga ttacaaatgc attgaagcct ggtttcttct cccacttacc aagtcagaga
841 cctttccgga cactcgagaa tgatgaggag caggaggcac tgccatctct ggataaacct
901 ggctggtact cccaagggaa cgctgtccac ctctatgaac ttctgaagaa aatgactggc
961 aaacctgaac ccaaggttgt ttattttggt gacagcatgc attcagatat tttcccagct
1021 cgtcactata gtaattggga gacagtcctc atcctggaag aactcagagg ggatgaaggc
1081 acgaggagtc agaggcctga ggagtcagag cctctagaga agaaaggaaa atatgaggga
1141 ccaaaagcaa aacctttaaa tacttcatct aaaaaatggg gctctttttt tattgattca
1201 gttttgggac tggaaaatac agaagactcc ttggtttata catggtcttg taagagaatc
1261 agtacttaca gcactattgc aattccaagt attgaagcaa tcgcagaatt acctctggac
1321 tacaaattta caagattctc ttcaagcaat tcaaaaacag ctggctacta tccaaatcct
1381 ccactggtct tatcaagtga tgagacactg atatccaaat aagttgtctt tactgaaaaa
1441 tgaagtgaag acccatatat gcagttaaaa aaaagttaat tttcaaaaaa tactgtaaaa
1501 gactttaagg aacaagtttt attgaccaat aagttgatat ttgtccatag gtctcctttc
1561 tataaatcat cttgatgttt aacaactctt attatattaa aatctcagta tcctaaaact
1621 tagaacctta ttgatatttt ctatacagta gttttgtgat tagaattcac ctggggacac
1681 acactcacac g
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