LOCUS       BC136825                1342 bp    mRNA    linear   HUM 11-FEB-2009
DEFINITION  Homo sapiens ceroid-lipofuscinosis, neuronal 8 (epilepsy,
            progressive with mental retardation), mRNA (cDNA clone MGC:168439
            IMAGE:9020816), complete cds.
ACCESSION   BC136825
VERSION     BC136825.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1342)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 13 Row: A Column: 16
            single stranded.
FEATURES             Location/Qualifiers
     source          1..1342
                     /db_xref="H-InvDB:HIT000500810"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:168439 IMAGE:9020816"
                     /tissue_type="Brain, cerebellum, PCR rescued clones"
                     /clone_lib="NIH_MGC_311"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: AGTTAACG"
     gene            1..1342
                     /gene="CLN8"
                     /db_xref="GeneID:2055"
                     /db_xref="HGNC:HGNC:2079"
                     /db_xref="MIM:607837"
     CDS             87..1019
                     /gene="CLN8"
                     /codon_start=1
                     /product="ceroid-lipofuscinosis, neuronal 8 (epilepsy,
                     progressive with mental retardation)"
                     /protein_id="AAI36826.1"
                     /db_xref="GeneID:2055"
                     /db_xref="HGNC:HGNC:2079"
                     /db_xref="MIM:607837"
                     /translation="MSSVENGGHWKRVARRGNARASGGGQPGVGSARVSCLSFMLGRR
                     CCVHVRKHLIACQKFPPLCACQVFDQVRTLVLCECAHADRSGGAPSLCPHAAEPRGSP
                     APQACGSAAKCVRCASWVLLCALSYGDTGGVGLDRYRSDYGDTGGVRLDRYRSDYGGT
                     GGVGLDRYRSDYGGTGGVGLDRYRSDYGGTGGVGLDRYRSDYGGTGGVGLDRYRSDYG
                     GTGGVGLDRYRSDYGGTGGVGLDRYRSDYGGTGGVGLDRYRSDYGDTGGVGLDRYRSD
                     YGGTGCVGLDRYRSDYGGTGGVGLDRYWSDARAP"
BASE COUNT          264 a          334 c          489 g          255 t
ORIGIN      
        1 ttaccacggt aagggcaggg ctgggaggct gggcagccag tttcaccctc gcacaggctg
       61 cctggcaaga ccagcggctg gaggtgatgt cctcagtaga gaacggtggc cactggaaac
      121 gtgtggccag aaggggaaac gctcgggcct ctggtggggg ccagcctggg gtggggtcgg
      181 ccagggtcag ctgcctttcc ttcatgctgg ggaggagatg ttgtgtgcat gtgagaaagc
      241 atttgatagc atgccaaaag tttcctccat tatgtgcgtg tcaagtgttt gaccaggtca
      301 gaactcttgt tctatgcgaa tgtgctcacg cagacagaag cggaggggct ccgtcgctct
      361 gccctcacgc cgctgaaccg cgagggtctc ccgctcctca ggcttgcggc tcggccgcga
      421 agtgtgtcag gtgtgcatcc tgggtgctcc tttgtgctct gtcctacggt gacacaggcg
      481 gcgtggggtt agacaggtac cggtcagact acggtgacac aggcggcgtg cggttagaca
      541 ggtaccggtc agattacggt ggcacaggcg gcgtggggtt agacaggtac cggtcagatt
      601 acggtggcac aggcggcgtg gggttagaca ggtaccggtc agattacggt ggcacaggcg
      661 gcgtggggtt agacaggtac cggtcagatt acggtggcac aggcggcgtg gggttagaca
      721 ggtaccggtc agattacggt ggcacaggcg gcgtggggtt agacaggtac cggtcagatt
      781 acggtggcac aggcggcgtg gggttagaca ggtaccggtc agattacggt ggcacaggcg
      841 gcgtggggtt agacaggtac cggtcagatt acggtgacac aggcggcgtg gggttagaca
      901 ggtaccggtc agattacggt ggcacaggct gcgtggggtt agacaggtac cggtcagatt
      961 acggtggcac aggcggcgtg gggttagaca ggtactggtc agatgcacgg gctccctaaa
     1021 cccctgctgt ggcttcggca gtaaagacag gacgcaccca tgtcacaaga ggagcacagg
     1081 caggggtgtt ggtgttgggg cagccctcag ggtctccaga ccccagcccc actcacacag
     1141 cagcctagga aggaagggca gagtcccagg tgtcagctgg tgggtctccc aggagctgcc
     1201 cctccctgga agtcacagga caggaatgac agatcaggga actgcaggaa gctgccacct
     1261 ctggggtcag aatatgccca gcctgcgggg gctctctatc ggggtcttcg agagccagac
     1321 agcctgcctt gtgctgcata cc
//