LOCUS BC136763 2398 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens LIM domain and actin binding 1, mRNA (cDNA clone MGC:168376 IMAGE:9020753), complete cds. ACCESSION BC136763 VERSION BC136763.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2398) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2398) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 671 Row: f Column: 15. FEATURES Location/Qualifiers source 1..2398 /db_xref="H-InvDB:HIT000500754" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168376 IMAGE:9020753" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: AGTAGACT" gene 1..2398 /gene="LIMA1" /gene_synonym="EPLIN" /gene_synonym="SREBP3" /db_xref="GeneID:51474" /db_xref="HGNC:HGNC:24636" /db_xref="MIM:608364" CDS 61..2340 /gene="LIMA1" /gene_synonym="EPLIN" /gene_synonym="SREBP3" /codon_start=1 /product="LIM domain and actin binding 1" /protein_id="AAI36764.1" /db_xref="GeneID:51474" /db_xref="HGNC:HGNC:24636" /db_xref="MIM:608364" /translation="MESSPFNRRQWTSLSLRVTAKELSLVNKNKSSAIVEIFSKYQKA AEETNMEKKRSNTENLSQHFRKGTLTVLKKKWENPGLGAESHTDSLRNSSTEIRHRAD HPPAEVTSHAASGAKADQEEQIHPRSRLRSPPEALVQGRYPHIKDGEDLKDHSTESKK MENCLGESRHEVEKSEISENTDASGKIEKYNVPLNRLKMMFEKGEPTQTKILRAQSRS ASGRKISENSYSLDDLEIGPGQLSSSTFDSEKNESRRNLELPRLSETSIKDRMAKYQA AVSKQSSSTNYTNELKASGGEIKIHKMEQKENVPPGPEVCITHQEGEKISANENSLAV RSTPAEDDSRDSQVKSEVQQPVHPKPLSPDSRASSLSESSPPKAMKKFQAPARETCVE CQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQLFKSKG NYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSPGVEDAPIAKVGVLAASM EAKASSQQEKEDKPAETKKLRIAWPPPTELGSSGSALEEGIKMSKPKWPPEDEISKPE VPEDVDLDLKKLRRSSSLKERSRPFTVAASFQSTSVKSPKTVSPPIRKGWSMSEQSEE SVGGRVAERKQVENAKASKKNGNVGKTTWQNKESKGETGKRSKEGHSLEMENENLVEN GADSDEDDNSFLKQQSPQEPKSLNWSSFVDNTFAEEFTTQNQKSQDVELWEGEVVKEL SVEEQIKRNRYYDEDEDEE" BASE COUNT 801 a 531 c 587 g 479 t ORIGIN 1 ctggtagcag cgcagaggaa aggcggcttt tagccaggta tttcagtgtc tgtagacaag 61 atggaatcat ctccatttaa tagacggcaa tggacctcac tatcattgag ggtaacagcc 121 aaagaacttt ctcttgtcaa caagaacaag tcatcggcta ttgtggaaat attctccaag 181 taccagaaag cagctgaaga aacaaacatg gagaagaaga gaagtaacac cgaaaatctc 241 tcccagcact ttagaaaggg gaccctgact gtgttaaaga agaagtggga gaacccaggg 301 ctgggagcag agtctcacac agactctcta cggaacagca gcactgagat taggcacaga 361 gcagaccatc ctcctgctga agtgacaagc cacgctgctt ctggagccaa agctgaccaa 421 gaagaacaaa tccaccccag atctagactc aggtcacctc ctgaagccct cgttcagggt 481 cgatatcccc acatcaagga cggtgaggat cttaaagacc actcaacaga aagtaaaaaa 541 atggaaaatt gtctaggaga atccaggcat gaagtagaaa aatcagaaat cagtgaaaac 601 acagatgctt cgggcaaaat agagaaatat aatgttccgc tgaacaggct taagatgatg 661 tttgagaaag gtgaaccaac tcaaactaag attctccggg cccaaagccg aagtgcaagt 721 ggaaggaaga tctctgaaaa cagctattct ctagatgacc tggaaatagg cccaggtcag 781 ttgtcatctt ctacatttga ctcggagaaa aatgagagta gacgaaatct ggaacttcca 841 cgcctctcag aaacctctat aaaggatcga atggccaagt accaggcagc tgtgtccaaa 901 caaagcagct caaccaacta tacaaatgag ctgaaagcca gtggtggcga aatcaaaatt 961 cataaaatgg agcaaaagga gaatgtgccc ccaggtcctg aggtctgcat cacccatcag 1021 gaaggggaaa agatttctgc aaatgagaat agcctggcag tccgttccac ccctgccgaa 1081 gatgactccc gtgactccca ggttaagagt gaggttcaac agcctgtcca tcccaagcca 1141 ctaagtccag attccagagc ctccagtctt tctgaaagtt ctcctcccaa agcaatgaag 1201 aagtttcagg cacctgcaag agagacctgc gtggaatgtc agaagacagt ctatccaatg 1261 gagcgtctct tggccaacca gcaggtgttt cacatcagct gcttccgttg ctcctattgc 1321 aacaacaaac tcagtctagg aacatatgca tctttacatg gaagaatcta ttgtaagcct 1381 cacttcaatc aactctttaa atctaagggc aactatgatg aaggctttgg gcacagacca 1441 cacaaggatc tatgggcaag caaaaatgaa aacgaagaga ttttggagag accagcccag 1501 cttgcaaatg caagggagac ccctcacagc ccaggggtag aagatgcccc tattgctaag 1561 gtgggtgtcc tggctgcaag tatggaagcc aaggcctcct ctcagcagga gaaggaagac 1621 aagccagctg aaaccaagaa gctgaggatc gcctggccac cccccactga acttggaagt 1681 tcaggaagtg ccttggagga agggatcaaa atgtcaaagc ccaaatggcc tcctgaagac 1741 gaaatcagca agcccgaagt tcctgaggat gtcgatctag atctgaagaa gctaagacga 1801 tcttcttcac tgaaggaaag aagccgccca ttcactgtag cagcttcatt tcaaagcacc 1861 tctgtcaaga gcccaaaaac tgtgtcccca cctatcagga aaggctggag catgtcagag 1921 cagagtgaag agtctgtggg tggaagagtt gcagaaagga aacaagtgga aaatgccaag 1981 gcttctaaga agaatgggaa tgtgggaaaa acaacctggc aaaacaaaga atctaaagga 2041 gagacaggga agagaagtaa ggaaggtcat agtttggaga tggagaatga gaatcttgta 2101 gaaaatggtg cagactccga tgaagatgat aacagcttcc tcaaacaaca atctccacaa 2161 gaacccaagt ctctgaattg gtcgagtttt gtagacaaca cctttgctga agaattcact 2221 actcagaatc agaaatccca ggatgtggaa ctctgggagg gagaagtggt caaagagctc 2281 tctgtggaag aacagataaa gagaaatcgg tattatgatg aggatgagga tgaagagtga 2341 caaattgcaa tgatgctggg ccttaaattc atgttagtgt tagcgagcca ctgccctt //