LOCUS BC136747 2624 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens protocadherin gamma subfamily A, 7, mRNA (cDNA clone MGC:168360 IMAGE:9020737), complete cds. ACCESSION BC136747 VERSION BC136747.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2624) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2624) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 671 Row: e Column: 23. FEATURES Location/Qualifiers source 1..2624 /db_xref="H-InvDB:HIT000500738" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168360 IMAGE:9020737" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TCAGTGGT" gene 1..2624 /gene="PCDHGA7" /gene_synonym="PCDH-GAMMA-A7" /db_xref="GeneID:56108" /db_xref="HGNC:HGNC:8705" /db_xref="MIM:606294" CDS 66..2519 /gene="PCDHGA7" /gene_synonym="PCDH-GAMMA-A7" /codon_start=1 /product="protocadherin gamma subfamily A, 7" /protein_id="AAI36748.1" /db_xref="GeneID:56108" /db_xref="HGNC:HGNC:8705" /db_xref="MIM:606294" /translation="MAAQPRGGDYRGFFLLSILLGTPWEAWAGRILYSVSEETDKGSF VGDIAKDLGLEPRELAERGVRIISRGRTQLFALNQRSGSLVTAGRIDREEICAQSARC LVNFNILMEDKMNLYPIDVEIIDINDNVPRFLTEEINVKIMENTAPGVRFPLSEAGDP DVGTNSLQSYQLSPNRHFSLAVQSGDDETKYPELVLERVLDREEERVHHLVLTASDGG DPPRSSTAHIQVTVVDVNDHTPVFSLPQYQVTVPENVPVGTRLLTVHAIDLDEGVNGE VTYSFRKITPKLPKMFHLNSLTGEISTLEGLDYEETAFYEMEVQAQDGPGSLTKAKVL ITVLDVNDNAPEVTMTSLSSSIPEDTPLGTVIALFYLQDRDSGKNGEVTCTIPENLPF KLEKSIDNYYRLVTTKNLDRETLSLYNITLKATDGGTPPLSRETHIFMQVADTNDNPP TFPHSSYSVYIAENNPRGASIFLVTAQDHDSEDNAQITYSLAEDTIQGAPVSSYVSIN SDTGVLYALQSFDYEQLRELQLRVTAHDSGDPPLSSNMSLSLFVLDQNDNPPEILYPA LPTDGSTGMELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYLLLKASEPGLFAVGLYTG EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLEPSD GPYNYDLTLYLVVAVATVSCVFLAFVLVLLALRLRRWHKSRLLQASEGGLANVPTSHF VGMDGVQAFLQTYSHEVSLTADSRKSHLIFPQPNYVDMLISQESCEKNDSLLTSVDFQ ECKENLPSIQVSPALPLFP" BASE COUNT 657 a 710 c 671 g 586 t ORIGIN 1 cggatacacc cgcattctga agcacttccc gagatcggcg cctaagcaag agaagcagga 61 cgactatggc ggctcagccg aggggcgggg actacagagg attcttcctg ctctccatcc 121 tcctggggac cccctgggaa gcctgggcag gacgtattct ctactccgtg tcggaggaga 181 cggacaaagg gtcctttgtg ggagacatcg ccaaggacct ggggctggag ccccgggagc 241 tggcggagcg cggagtccgc atcatctcca gaggtaggac gcagcttttc gccctgaacc 301 agcgcagcgg cagcttggtc actgcgggca ggatagaccg ggaagagatc tgcgctcaga 361 gtgcgcggtg tctggtaaac tttaacatcc tgatggaaga taaaatgaat ctttacccta 421 tagacgtgga aataatagat attaatgaca acgttccaag attcttgacg gaagaaataa 481 atgtaaaaat aatggagaat acagctcctg gggttcggtt tccgttaagc gaggctgggg 541 atccagatgt gggcacgaac tccctccaga gttaccagct cagccccaat cgccacttct 601 ccctggctgt gcaaagtgga gacgatgaaa ctaagtaccc ggaactggtg ctggagcggg 661 tgctggaccg ggaggaagag cgggttcacc acctggtcct cacagcctct gatggcggcg 721 acccgccccg atccagcacc gcccacatcc aggtgacagt ggtggatgtg aatgaccaca 781 cgcctgtctt ctctctgcct cagtaccaag taactgtccc cgagaatgtg ccagtgggta 841 caagactgct cacggtacat gctatcgacc tggacgaggg agtcaatggg gaagtgacat 901 attcttttcg gaaaataact cctaaacttc caaagatgtt tcatctgaac tcgcttacag 961 gagaaatatc aactttagaa ggattagatt atgaagaaac tgccttctat gaaatggagg 1021 ttcaggctca agatggtcct ggtagtctga caaaggcaaa agtactgatc acagttttag 1081 atgtaaatga taatgctcca gaagtgacta tgacgtcttt aagtagctca atccctgaag 1141 acacacctct tgggacagtc attgctcttt tctacctaca agacagagat tctggaaaga 1201 atggtgaggt gacctgcacc attccagaaa acctaccttt taaattagaa aaatcaatag 1261 ataattatta tagattggtc acaaccaaaa acttggaccg ggaaacactc tctttgtata 1321 acatcacact gaaagccaca gatggtggaa ctcctccctt gtccagggaa actcacatat 1381 tcatgcaggt ggcagacacc aacgataacc cacccacctt cccccactca tcctactcag 1441 tctacatcgc tgagaacaac cccagagggg cctccatttt cttagtgact gcacaggacc 1501 acgacagtga ggataatgcc cagatcactt attccttggc cgaagacacc atccaggggg 1561 ctccagtgtc ctcctatgtc tccataaact ctgacactgg agtcctgtac gcgctgcaat 1621 cctttgatta tgagcagttg agagaactac aactaagagt gactgcacat gacagcgggg 1681 acccgcctct cagcagcaac atgtcactga gcctgttcgt gctggaccag aatgacaacc 1741 cgcccgagat cctgtacccg gccctcccca cagatggttc tactggcatg gagctggcac 1801 cccgctccgc agagcccggc tacctggtga ccaaggtggt ggcggtggac aaagattcag 1861 gccagaacgc ctggctgtca tacctcctgc ttaaggccag cgagccagga ctctttgcgg 1921 ttgggctgta cacgggcgag gtgcgcacgg ctcgggccct gctggacaga gatgccctca 1981 agcagagcct cgtggtggcc gtccaggacc acggtcagcc tcctctgtca gccaccgtca 2041 cactcaccgt ggctgtggct gacagcatcc ccgaagtctt ggccgacctg ggcagccttg 2101 agccctccga cggtccttac aactatgacc tcacgttgta cctggtggtg gcggtggcca 2161 cagtctcctg cgtcttccta gccttcgtcc tcgtactgct ggcgctcagg ctgcggcgct 2221 ggcacaagtc acgcctgctg caggcttcag aaggtggctt ggcgaacgtg cccacctcgc 2281 actttgtggg catggacggg gtgcaggctt tcctgcagac ctattcccat gaggtctccc 2341 tcaccgcgga ctctcggaag agtcacctga tcttccccca gcccaactat gtagacatgc 2401 tcatcagcca ggagagctgt gagaaaaatg attctttgct aacatccgta gattttcagg 2461 aatgtaaaga aaacctgcca agtattcagg tgagcccagc ccttccttta tttccatgag 2521 gaatttattt gcatgatatt tctctattat tttgcaaaac aaatgttttg aaaataggga 2581 tttaaaaaac tttatagagg taaaaatgag tttaccagtt tcct //