LOCUS BC136700 1088 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens olfactory receptor, family 5, subfamily C, member 1,
mRNA (cDNA clone MGC:168313 IMAGE:9020690), complete cds.
ACCESSION BC136700
VERSION BC136700.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1088)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1088)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 671 Row: c Column: 24
single stranded.
FEATURES Location/Qualifiers
source 1..1088
/db_xref="H-InvDB:HIT000500698"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168313 IMAGE:9020690"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GACGTCAG"
gene 1..1088
/gene="OR5C1"
/gene_synonym="OR9-31"
/gene_synonym="OR9-F"
/db_xref="GeneID:392391"
/db_xref="HGNC:HGNC:8331"
CDS 63..1025
/gene="OR5C1"
/gene_synonym="OR9-31"
/gene_synonym="OR9-F"
/codon_start=1
/product="OR5C1 protein"
/protein_id="AAI36701.1"
/db_xref="GeneID:392391"
/db_xref="HGNC:HGNC:8331"
/translation="MNSENLTRAAVAPAEFVLLGITNRWDLRVALFLTCLPVYLVSLL
GNMGMALLIRMDARLHTPMYFFLANLSLLDACYSSAIGPKMLVDLLLPRATIPYTACA
LQMFVFAGLADTECCLLAAMAYDRYVAIRNPLLYTTAMSQRLCLALLGASGLGGAVSA
FVHTTLTFRLSFCRSRKINSFFCDIPPLLAISCSDTSLNELLLFAICGFIQTATVLAI
TVSYGFIAGAVIHMRSVEGSRRAASTGGSHLTAVAMMYGTLIFMYLRPSSSYALDTDK
MASVFYTLVIPSLNPLIYSLRNKEVKEALRQTWSRFHCPGQGSQ"
BASE COUNT 183 a 357 c 278 g 270 t
ORIGIN
1 tggccttgcc attgctctta tctccctcct gctttgcctc ttctcagtct ctgtccagta
61 ggatgaactc agagaacctc acccgggccg cggttgcccc tgctgaattc gtcctcctgg
121 gcatcacaaa tcgctgggac ctgcgtgtgg ccctcttcct gacctgcctg cctgtctacc
181 tggtgagcct gctgggaaac atgggcatgg cgctgctgat ccgcatggat gcccggctcc
241 acacacctat gtacttcttc ctggccaacc tctccctgct ggatgcctgc tattcctccg
301 ccatcggccc caagatgcta gtggacctgc tgctgccccg agccaccatc ccttacacag
361 cctgtgccct ccagatgttt gtctttgcag gtctggctga tactgagtgt tgcttgctgg
421 cagccatggc ctatgaccgc tacgtggcca tcagaaaccc acttctctat acaacagcta
481 tgtcgcagcg tctatgcctg gccttgctgg gagcatcagg cctgggtggg gcagtgagtg
541 cctttgttca cacaaccctc accttccgcc tgagcttctg ccgctcccgg aagatcaata
601 gcttcttctg cgatatccct ccactgctgg ccatctcgtg cagtgacacc agtctcaatg
661 aactccttct cttcgccatc tgtggcttca tccagacagc cacggtgtta gctatcacgg
721 tgtcttatgg cttcatcgct ggggctgtga tccacatgcg ctcggtcgag ggcagtcggc
781 gagcagcctc caccggtggt tcccacctca cagccgtggc catgatgtac gggacactca
841 ttttcatgta cctgcgcccc agctccagct atgccctgga cactgacaag atggcctctg
901 tgttctatac cctggtcatc ccgtctctca acccactcat ctacagcctc cgcaataagg
961 aggtcaagga ggccctcagg cagacctgga gccgattcca ctgtccaggg caggggtccc
1021 agtgattggt ccagggaggc tgggtaggtc tgactatgag gggatgagga aggtcggggc
1081 ctctttct
//