LOCUS BC136698 2005 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens BRCA1 associated protein, mRNA (cDNA clone MGC:168311
IMAGE:9020688), complete cds.
ACCESSION BC136698
VERSION BC136698.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2005)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: E Column: 10
single stranded.
FEATURES Location/Qualifiers
source 1..2005
/db_xref="H-InvDB:HIT000500696"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168311 IMAGE:9020688"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CATAAACG"
gene 1..2005
/gene="BRAP"
/gene_synonym="BRAP2"
/gene_synonym="IMP"
/gene_synonym="RNF52"
/db_xref="GeneID:8315"
/db_xref="HGNC:HGNC:1099"
/db_xref="MIM:604986"
CDS 140..1918
/gene="BRAP"
/gene_synonym="BRAP2"
/gene_synonym="IMP"
/gene_synonym="RNF52"
/codon_start=1
/product="BRCA1 associated protein"
/protein_id="AAI36699.1"
/db_xref="GeneID:8315"
/db_xref="HGNC:HGNC:1099"
/db_xref="MIM:604986"
/translation="MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASA
VACLEGKSPGEKVAIIHQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQR
SKDHSKECINAAPDSPSKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRS
AMLCILTVPAAMTSHDLMKFVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFY
MTCNGRQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVN
GILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLWICLICGH
IGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYECE
GDTCQEEKIDALQLEYSYLLTSQLESQRIYWENKIVRIEKDTAEEINNMKTKFKETIE
KCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKL
KEEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQINIAM
ASASSPASSGGSGKLPSRKGRSKRGK"
BASE COUNT 585 a 474 c 527 g 419 t
ORIGIN
1 gaggagctgc tgctgctgag gcggcggcaa ctgcattgag gtggtggcgg cgctgccggc
61 cccgggccgc tcggcctctc ggctcgcctt ccagcctcgc ctgagcccgc cggggcccgc
121 gccggccagc gcctgcccta tgagtgtgtc actggttgtt atccgattgg agctcgcgga
181 acactcgcct gtccccgccg gcttcggctt cagcgccgcg gccggggaaa tgtctgatga
241 ggagataaaa aagacgacac tagcctcagc tgtagcctgt ttagaaggca agtcaccagg
301 agagaaagta gcgattatcc atcagcatct cggccgtcga gaaatgacag atgtgatcat
361 tgagaccatg aagtccaacc cagatgaact aaaaactaca gtggaagaaa ggaagtcttc
421 agaagcctcc cccactgcgc aaagaagtaa agatcacagt aaggaatgca taaacgctgc
481 cccagattct ccgtccaaac agcttccaga ccagatttca ttcttcagtg gaaatccatc
541 agttgaaata gttcatggta ttatgcacct atataagaca aataagatga cctccttaaa
601 agaagatgtg cggcgcagtg ccatgctgtg tattctcaca gtccctgctg caatgaccag
661 tcatgacctt atgaagtttg ttgccccatt taacgaagta attgaacaaa tgaaaattat
721 cagagactct actcccaacc aatatatggt gctgataaag tttcgtgcac aggctgatgc
781 ggatagtttt tatatgacat gcaatggccg ccagttcaac tcaatagaag atgacgtttg
841 ccagctagtg tatgtggaaa gagctgaagt gctcaaatct gaagatggcg ccagcctccc
901 agtgatggac ctgactgaac tccccaagtg cacggtgtgt ctggagcgca tggacgagtc
961 tgtgaatggc atcctcacaa cgttatgtaa ccacagcttc cacagccagt gtctacagcg
1021 ctgggacgat accacgtgtc ctgtttgccg gtactgtcaa acgcccgagc cagtagaaga
1081 aaataagtgt tttgagtgtg gtgttcagga aaatctttgg atttgtttaa tatgcggcca
1141 cataggatgt ggacggtatg tcagtcgaca tgcttataag cactttgagg aaacgcagca
1201 cacgtatgcc atgcagctta ccaaccatcg agtctgggac tatgctggag ataactatgt
1261 tcatcgactg gttgcaagta aaacagatgg aaaaatagta cagtatgaat gtgaggggga
1321 tacttgccag gaagagaaaa tagatgcctt acagttagag tattcatatt tactaacaag
1381 ccagctggaa tctcagcgaa tctactggga aaacaagata gttcggatag agaaggacac
1441 agcagaggaa attaacaaca tgaagaccaa gtttaaagaa acaattgaga agtgtgataa
1501 tctagagcac aaactaaatg atctcctaaa agaaaagcag tctgtggaaa gaaagtgcac
1561 tcagctaaac acaaaagtgg ccaaactcac caacgagctc aaagaggagc aggaaatgaa
1621 caagtgtttg cgagccaacc aagtcctcct gcagaacaag ctaaaagagg aggagagggt
1681 gctgaaggag acctgtgacc aaaaagatct gcagatcacc gagatccagg agcagctgcg
1741 tgacgtcatg ttctacctgg agacacagca gaagatcaac catctgcctg ccgagacccg
1801 gcaggaaatc caggagggac agatcaacat cgccatggcc tcggcctcga gccctgcctc
1861 ttcggggggc agtgggaagt tgccctccag gaagggccgc agcaagaggg gcaagtgacc
1921 ttcagagcaa cagacatccc tgagactgtt ctccctgaca ctgtgagagt gtgctgggac
1981 cttcagctaa atgtgagggt gggcc
//