LOCUS BC136696 3233 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens zinc finger protein 483, mRNA (cDNA clone MGC:168309
IMAGE:9020686), complete cds.
ACCESSION BC136696
VERSION BC136696.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3233)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3233)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 671 Row: c Column: 20.
FEATURES Location/Qualifiers
source 1..3233
/db_xref="H-InvDB:HIT000500694"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168309 IMAGE:9020686"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CACCGTCT"
gene 1..3233
/gene="ZNF483"
/gene_synonym="ZKSCAN16"
/db_xref="GeneID:158399"
/db_xref="HGNC:HGNC:23384"
CDS 26..2260
/gene="ZNF483"
/gene_synonym="ZKSCAN16"
/codon_start=1
/product="zinc finger protein 483"
/protein_id="AAI36697.1"
/db_xref="GeneID:158399"
/db_xref="HGNC:HGNC:23384"
/translation="MQAVVPLNKMTAISPEPQTLASTEQNEVPRVVTSGEQEAILRGN
AADAESFRQRFRWFCYSEVAGPRKALSQLWELCNQWLRPDIHTKEQILELLVFEQFLT
ILPGEIRIWVKSQHPESSEEVVTLIEDLTQMLEEKDPVSQDSTVSQEENSKEDKMVTV
CPNTESCESITLKDVAVNFSRGEWKKLEPFQKELYKEVLLENLRNLEFLDFPVSKLEL
ISQLKWVELPWLLEEVSKSSRLDESALDKIIERCLRDDDHGLMEESQQYCGSSEEDHG
NQGNSKGRVAQNKTLGSGSRGKKFDPDKSPFGHNFKETSDLIKHLRVYLRKKSRRYNE
SKKPFSFHSDLVLNRKEKTAGEKSRKSNDGGKVLSHSSALTEHQKRQKIHLGDRSQKC
SKCGIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGEKTHKCSKCGKAFGY
SASLTKHRRIHTGEKPYMCNECGKAFSDSSSLTPHHRTHSGEKPFKCDDCGKGFTLSA
HLIKHQRIHTGEKPYKCKDCGRPFSDSSSLIQHQRIHTGEKPYTCSNCGKSFSHSSSL
SKHQRIHTGEKPYKCGECGKAFRQNSCLTRHQRIHTGEKPYLCNDCGMTFSHFTSVIY
HQRLHSGEKPYKCNQCEKAFPTHSLLSRHQRIHTGVKPYKCKECGKSFSQSSSLNEHH
RIHTGEKPYECNYCGATFSRSSILVEHLKIHTGRREYECNECEKTFKSNSGLIRHRGF
HSAE"
BASE COUNT 1010 a 613 c 709 g 901 t
ORIGIN
1 actggattcc tgcccctgag acacaatgca agctgtagtg cccttgaaca agatgacagc
61 catctcacca gaacctcaaa ctctggcctc gactgaacaa aatgaggtcc caagagtggt
121 tacttctggg gaacaagaag ctattttaag aggaaatgct gctgatgcag agtctttcag
181 acagaggttt aggtggtttt gttactcaga agtagctgga cccaggaaag ctctgagtca
241 actctgggag ctctgcaatc agtggctgag accagacatt cacacgaaag aacagatttt
301 agagcttctg gtgtttgagc agttcctgac cattttgcct ggggagatca ggatttgggt
361 aaagtcacaa catcctgaga gtagtgagga agtggtgacc ctaatagaag atttgaccca
421 gatgcttgaa gaaaaagatc cagtctctca agattctact gtttcccaag aggagaactc
481 aaaagaggat aaaatggtca ctgtttgtcc caatactgag tcctgtgaat ctataacatt
541 gaaggatgta gctgtgaact tttcaagagg agagtggaag aagctggagc cttttcaaaa
601 ggagctatat aaggaagtgc tactggaaaa cctcaggaac ctagaatttc tggactttcc
661 agtttcaaaa ttagagttga tttcccagct aaagtgggtt gaattgccat ggctgctgga
721 agaagtctca aaaagctccc gactagatga atcagcttta gataaaataa tagaaaggtg
781 cctcagggat gatgatcatg gcttgatgga agaatcccag caatattgtg gcagctcaga
841 ggaggatcac ggtaatcagg gaaattcaaa aggaagagtc gcacaaaaca aaactcttgg
901 gagtggcagt aggggtaaga aatttgaccc agataaaagc ccctttggac ataatttcaa
961 agaaacttca gacttaatta aacatctgag agtctacttg aggaagaaat ctcggaggta
1021 taatgaaagc aagaaaccct tcagttttca ttcagacctt gttctgaacc gcaaggagaa
1081 aaccgccgga gaaaagtcac ggaaatctaa tgatggtggg aaagtcctga gtcactcttc
1141 agctcttact gaacatcaga aacgtcagaa gattcatttg ggggataggt cccaaaaatg
1201 cagtaagtgt gggataatct ttattagaag atcaactctt tctaggagaa aaacccctat
1261 gtgtgagaaa tgtcggaaag attcatgtca agaagcagcc ttaaataaag atgagggaaa
1321 tgagagtgga gaaaaaactc ataaatgtag taagtgtgga aaagcctttg gctatagcgc
1381 ctcactcacc aaacatcgga gaattcacac tggagaaaaa ccctatatgt gtaatgaatg
1441 tggaaaagct tttagtgata gttcatcgct cacaccacat catagaactc atagtggaga
1501 gaaacccttc aaatgtgatg actgtgggaa aggtttcacc ctaagtgctc acctcattaa
1561 acatcagaga attcatactg gagaaaaacc ttataaatgt aaagactgtg ggagaccctt
1621 tagtgacagt tcatctctta ttcaacatca gcgaattcat actggagaaa aaccctatac
1681 atgtagcaat tgtggaaaat ccttcagtca tagctcatcc ctttccaaac atcagagaat
1741 tcatactgga gagaaaccct ataaatgtgg cgaatgtgga aaagccttta ggcagaattc
1801 atgccttacc cggcatcaga gaattcacac tggagaaaaa ccatatttgt gtaatgattg
1861 cggaatgact tttagccatt ttacgtctgt gatttatcat caaagacttc attcaggaga
1921 aaaaccctac aaatgtaacc agtgtgagaa agccttccca acccattcac tgctaagtcg
1981 tcatcagaga attcatactg gtgtaaaacc ttataaatgt aaagaatgtg ggaagtcctt
2041 cagtcagagt tcatctctta atgagcacca ccgaattcat acaggagaga aaccctatga
2101 gtgtaactat tgtggtgcaa cctttagtcg aagctcaatc cttgtagaac acctaaaaat
2161 tcataccgga aggagagaat atgaatgtaa cgaatgtgag aagacattta aaagtaattc
2221 aggcctcatt agacatcggg gatttcactc tgcagagtaa tcctggaact acattaaagt
2281 ggggggaatt taattcaaat tgtcagttac tgaaaccctg ggatgtaaac ttacagtatt
2341 gatcagtagc tgcagctttc gtaaattggc agttaggaaa aatattcttt tgcccattca
2401 tccctcttct tttcaaggat ggcaacgact ggtaaacagt aattagttgg taaagtcact
2461 ggaaagggaa gaatgcaaaa tgattctgag gccagacgaa ttggaaaagc tcttttcttc
2521 aggggatctc tctctgattt cttctactac catgtagtgt gatggagaga acttgactgc
2581 agtcacataa cttggattct gtcccagttt gccaaccaac ttgctgtata caccttggac
2641 aagtcatttg acctttcaga attttatttt cgtcaccagc agaatgaagg gatgggatta
2701 atgatttttg ccttttttgg ttttttagtt ttttattggt atcctgataa tctctgaagc
2761 tgtggacata agttattttt ttttatttgt cattactttc aagtttctct agtaaaaaat
2821 acaataccac tattcaggat gctggacttc ttttcttttt tttttctttt ttttttttca
2881 atttttcttt tttgggatgg agtctcacta tgttgcccag actggtcttg aactcctggg
2941 ctcaagtgat ccttccatct cactttcctg agtagctgac attacgggta cactccatca
3001 agcctggttc ctaggatgct ggacttctag cttagtgaga atgcagtata ctttttgaaa
3061 acttcgtgca ggaatccctc aaatgctgta actaggaatg ggtcagtgaa gttcaaacga
3121 cttttccttg agggagtatt ttaatcggac aagggaactc tttttctttt gggcattggc
3181 caacaggact gagaagccag agagcttgca cctgagccat ctcagccgtg aga
//