LOCUS BC136693 1862 bp mRNA linear HUM 25-AUG-2008
DEFINITION Homo sapiens chromosome 2 open reading frame 21, mRNA (cDNA clone
IMAGE:9020683), complete cds.
ACCESSION BC136693
VERSION BC136693.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1862)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1862)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 671 Row: c Column: 17
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1862
/db_xref="H-InvDB:HIT000500691"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9020683"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCCTATCA"
gene 1..1862
/gene="C2orf21"
/db_xref="GeneID:285175"
/db_xref="HGNC:HGNC:26582"
CDS 52..1014
/gene="C2orf21"
/codon_start=1
/product="chromosome 2 open reading frame 21"
/protein_id="AAI36694.1"
/db_xref="GeneID:285175"
/db_xref="HGNC:HGNC:26582"
/translation="MVKRKSSEGQEQDGGRGIPLPIQTFLWRQTSAFLRPKLGKQYEA
SCVSFERVLVENKLHGLSPALSEAIQSISRWELVQAALPHVLHCTATLLSNRNKLGHQ
DKLGVAETKLLHTLHWMLLEAPQDCNNERFGGTDRGSSWGGSSSAFIHQVENQGSPGQ
PCQSSSNDEEENNRRKIFQNSMATVELFVFLFAPLVHRIKESDLTFRLASGLVIWQPM
WEHRQPGVSGFTALVKPIRNIITAKRSSPINSQSRTCESPNQDARHLEGLQVVCETFQ
SDSISPKATISGCHRGNSFDGSLSSQTSQERGPSHSRSTFHFPP"
BASE COUNT 522 a 443 c 482 g 415 t
ORIGIN
1 agcgaggaga cagagctggg tcctgcagta ggactcccgg gagccaccat tatggtgaag
61 aggaagagct ccgagggcca ggagcaggac ggcggccgcg gcatccccct gcccatccag
121 accttcctgt ggcggcaaac cagtgcattt ttgaggccca aactggggaa gcaatatgaa
181 gcttcttgtg tgtcctttga gcgagtgttg gtagaaaaca agctgcatgg cctctctcca
241 gctctctctg aagccatcca gagcatttcc agatgggaac tggtgcaagc tgctttgcct
301 catgtcctcc actgcactgc aaccctgctt tcaaaccgaa acaagctagg ccaccaggat
361 aaattgggtg ttgctgagac aaagctcctt cacactctac actggatgct tctggaggcc
421 ccccaggact gcaacaatga gcggtttggg ggtacagacc gaggctccag ctggggtgga
481 agcagcagtg ctttcatcca ccaggttgaa aaccagggtt ctccagggca gccttgccaa
541 agcagctcta atgacgaaga agagaacaac cgaagaaaga tcttccagaa ctccatggct
601 actgtggagc tcttcgtgtt tctgtttgct cccctggtac acaggatcaa ggaatctgac
661 ctcaccttcc gtctggccag tgggcttgtt atatggcagc ccatgtggga acacagacag
721 cccggagtct ctggctttac cgcactggtg aagcccatca ggaacatcat tacagctaag
781 agaagttctc ctatcaacag tcaaagccgg acctgtgaat caccaaatca agatgcaaga
841 cacttagagg gactccaggt ggtttgtgaa acattccagt ctgattccat ctcacccaag
901 gccaccattt caggctgtca ccgaggaaac tcctttgatg gaagtctgtc ctcccaaact
961 tcccaggaaa gaggcccatc acattccaga agcacctttc acttcccacc atgattctga
1021 ggccttctca gccatgtgga actgtaactc caattaaact tacttatgtt cccagtttgg
1081 ggtatttatc agcagcaaga aaatgaacta atatagtaaa ttggtaccag tagagtgggg
1141 cattgctgaa aagataccca aaagtgtgga agcaactttg gaactgggta acaggcagag
1201 attggaacag tttgaagagc tcagaagaag acagggaagt gtggaaaagt ttggaacttt
1261 acctagagac ttgttgaatg gctttgccca aaatgctgat agcgacatag acaataaaac
1321 caggctgagg tggtctcaga tggagatgag gaacttgtag ggaactggag caaaggtgac
1381 tcttgttatg ttttagcaaa gagactggtg gcattttgcc cctgtcctag agatttgtgg
1441 aactttgaac ttgagagaga tgatttaggt tacctggcgg aagaaatttc taaacagcaa
1501 agcattcaag aggtgacttg ggtactgtta aaggcattca gttttaaaag ggaaacagag
1561 cataaaagtt cagaaaattt gcagcctgac tatgcaacag aaaagaaaaa ccaattttct
1621 ggggagaaat tcaagccaac tgcagaaatt tgcataagta aggagcaagg agcctaatgt
1681 taatccccaa gaccatgggg aaaatgtctc caagccatgt cagagacctt cacagcagcc
1741 cctcccatca caggcccaga ggcccaggag gaaaaagcag tttcgtgggc tgggcccagg
1801 gtcctcatgc tgtgtgcagc cgagggactt ggtgccgtgg gtcccaactg ctccaactgt
1861 gg
//