LOCUS       BC136660                4862 bp    mRNA    linear   HUM 11-FEB-2009
DEFINITION  Homo sapiens interleukin 16 (lymphocyte chemoattractant factor),
            mRNA (cDNA clone MGC:168273 IMAGE:9020650), complete cds.
ACCESSION   BC136660
VERSION     BC136660.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4862)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4862)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (29-MAR-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Ambion
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: LLDM Plate: 671 Row: b Column: 8
            single stranded.
FEATURES             Location/Qualifiers
     source          1..4862
                     /db_xref="H-InvDB:HIT000500667"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:168273 IMAGE:9020650"
                     /tissue_type="Testicle, PCR rescued clones"
                     /clone_lib="NIH_MGC_382"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: CCCCCTAT"
     gene            1..4862
                     /gene="IL16"
                     /gene_synonym="HsT19289"
                     /gene_synonym="IL-16"
                     /gene_synonym="LCF"
                     /gene_synonym="prIL-16"
                     /db_xref="GeneID:3603"
                     /db_xref="HGNC:HGNC:5980"
                     /db_xref="MIM:603035"
     CDS             127..4122
                     /gene="IL16"
                     /gene_synonym="HsT19289"
                     /gene_synonym="IL-16"
                     /gene_synonym="LCF"
                     /gene_synonym="prIL-16"
                     /codon_start=1
                     /product="IL16 protein"
                     /protein_id="AAI36661.1"
                     /db_xref="GeneID:3603"
                     /db_xref="HGNC:HGNC:5980"
                     /db_xref="MIM:603035"
                     /translation="MESHSRAGKSRKSAKFRSISRSLMLCNAKTSDDGSSPDEKYPDP
                     FEISLAQGKEGIFHSSVQLADTSEAGPSSVPDLALASEAAQLQAAGNDRGKTCRRIFF
                     MKESSTASSREKPGKLEAQSSNFLFPKACHQRARSNSTSVNPYCTREIDFPMTKKSAA
                     PTDRQPYSLCSNRKSLSQQLDCPAGKAAGTSRPTRSLSTAQLVQPSGGLQASVISNIV
                     LMKGQAKGLGFSIVGGKDSIYGPIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMA
                     GLTHQDALQKFKQAKKGLLTLTVRTRLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSF
                     ALESPSAPISTAKPNYRIMVEVSLQKEAGVGLGIGLCSVPYFQCISGIFVHTLSPGSV
                     AHLDGRLRCGDEIVEISDSPVHCLTLNEVYTILSRCDPGPVPIIVSRHPDPQVSEQQL
                     KEAVAQAVENTKFGKERHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPHRRAQKVMI
                     RSSSDSSYMSGSPGGSPGSGSAEKPSSDVDISTHSPSLPLAREPVVLSIASSRLPQES
                     PPLPESRDSHPPLRLKKSFEILVRKPMSSKPKPPPRKYFKSDSDPQKSLEERENSSCS
                     SGHTPPTCGQEARELLPLLLPQEDTAGRSPSASAGCPGPGIGPQTKSSTEGEPGWRRA
                     SPVTQTSPIKHPLLKRQARMDYSFDTTAEDPWVRISDCIKNLFSPIMSENHGHMPLQP
                     NASLNEEEGTQGHPDGTPPKLDTANGTPKVYKSADSSTVKKGPPVAPKPAWFRQSLKG
                     LRNRASDPRGLPDPALSTQPAPASREHLGSHIRASSSSSSIRQRISSFETFGSSQLPD
                     KGAQRLSLQPSSGEAAKPLGKHEEGRFSGLLGRGAAPTLVPQQPEQVLSSGSPAASEA
                     RDPGVSESPPPGRQPNQKTLPPGPDPLLRLLSTQAEESQGPVLKMPSQRARSFPLTRS
                     QSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEGASPTSSSNE
                     DSAANGSAETSALDTGFSLNLSELREYTEGLTEAKEDDDGDHSSLQSGQSVISLLSSE
                     ELKKLIEEVKVLDEATLKQLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFP
                     NGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAMP
                     DLNSSTDSAASASAASDVSVESTEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTI
                     NRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSL
                     QSKETTAAGDS"
BASE COUNT         1235 a         1395 c         1263 g          969 t
ORIGIN      
        1 atggagctga gggaaggcag agctgggact catgaagtgg cagctaagcc ctgtccagtg
       61 gccacccgtc agccaagggc cagagaccag gaaaggaaga aaggcagctt cacttcctct
      121 ttgaggatgg agtcgcacag ccgcgctgga aagagcagaa aatctgcaaa atttcggtcc
      181 atctccaggt ccctgatgct ctgtaatgct aagaccagtg atgatggctc tagccctgat
      241 gagaaatatc ctgatccctt tgagatttcc ttggcccagg gcaaggaggg aattttccac
      301 tcatctgtgc agctggcaga cacatcggag gctgggccca gcagtgttcc tgatctagca
      361 ctggcctcgg aggctgctca actccaagca gctgggaatg atcgaggcaa gacctgtagg
      421 aggatattct tcatgaagga atcttccaca gcttcctctc gagaaaagcc tggaaaacta
      481 gaagcacaaa gtagtaactt cctgtttcct aaagcctgcc accaaagggc acgcagcaac
      541 tcaaccagtg ttaatcccta ttgcacaaga gaaattgatt ttccaatgac caagaaatct
      601 gcagcgccca cggacaggca gccttactct ctctgcagta acaggaagtc cctctctcaa
      661 caattggact gtccagcagg aaaggctgcg ggaacttcga gaccaacacg gtccctgagc
      721 acagctcagc tcgtgcagcc atctgggggc ctccaggctt cagtcatctc caacatcgtg
      781 ctgatgaagg gccaggctaa gggtctgggc ttcagcatcg ttgggggaaa agacagcatt
      841 tatggcccca ttgggattta cgtcaaaacc atttttgcag ggggagcagc agcagccgat
      901 ggaaggctac aggaaggtga tgaaattctg gagctcaatg gtgaatcaat ggctggacta
      961 acacatcagg atgctttgca gaagttcaag caagccaaaa aggggctcct caccctcacc
     1021 gtgagaaccc gcctgacggc gcctccttcc ctgtgcagcc acctgtctcc cccactgtgc
     1081 cgctccctga gctccagcac ttgtatcacc aaggacagca gctccttcgc cttggaaagc
     1141 ccctcggctc ccatcagcac cgccaagccc aattacagaa tcatggtgga ggtttctctg
     1201 cagaaagagg ccggcgtggg cctgggcatc ggcctgtgca gcgttcccta cttccaatgc
     1261 atctctggca ttttcgtcca cacgctgtca ccaggatccg tggcgcacct ggacggacgt
     1321 ctccggtgtg gggacgagat tgtggaaatc agtgattccc ctgtgcactg cctgacgctc
     1381 aatgaagtct acacgatcct gagtcgctgt gatcccggtc cagtccccat cattgttagc
     1441 cgacatccag acccacaggt ctctgaacag caactcaaag aagctgtggc ccaggctgtg
     1501 gaaaacacca agtttggaaa ggagaggcat caatggagtc tggaaggtgt caaaaggctg
     1561 gaaagcagtt ggcacgggcg gcccaccttg gagaaggaac gagagaagaa ctcagcaccc
     1621 ccgcatcgca gggctcagaa ggtcatgatc cgctccagca gtgacagcag ctacatgtct
     1681 gggtccccag ggggaagtcc tgggagtggc agtgctgaga agccgtcctc tgacgtggac
     1741 atcagcacac acagccccag cttgcctctg gcacgggagc cagtggtgct ttctatagca
     1801 tcctccaggc tgccccagga gagcccaccc ctcccagaga gccgggacag ccacccgccg
     1861 ctgagactga agaaatcctt tgagattttg gtgagaaagc ctatgtcctc caagcccaag
     1921 cctccaccca gaaaatactt taaaagtgac agtgaccctc agaagagtct ggaagagaga
     1981 gagaactcct catgctcttc tgggcacacc ccacccacct gtggccagga agcgagagag
     2041 ctgctgccac tgctgctacc acaggaagac acagcaggga gaagccctag tgcctctgcc
     2101 ggctgcccag gacctggtat cggcccacag accaagtcct ccacagaggg cgagccaggg
     2161 tggagaagag ccagcccagt gacccaaaca tccccgataa aacacccact gcttaagagg
     2221 caggctcgga tggactatag ctttgatacc acagccgaag acccttgggt taggatttct
     2281 gactgcatca aaaacttatt tagccccatc atgagtgaga accatggcca catgcctcta
     2341 cagcccaatg ccagcctgaa tgaagaagaa gggacacagg gccacccaga tgggacccca
     2401 ccaaagctgg acaccgccaa tggcactccc aaagtttaca agtcagcaga cagcagcact
     2461 gtgaagaaag gtcctcctgt ggctcccaag ccagcctggt ttcgccaaag cttgaaaggt
     2521 ttgaggaatc gtgcttcaga cccaagaggg ctccctgatc ctgccttgtc cacccagcca
     2581 gcacctgctt ccagggagca cctaggatca cacatccggg cctcctcctc ctcctcctcc
     2641 atcaggcaga gaatcagctc ctttgaaacc tttggctcct ctcaactgcc tgacaaagga
     2701 gcccagagac tgagcctcca gccctcctct ggggaggcag caaaacctct tgggaagcat
     2761 gaggaaggac ggttttctgg actcttgggg cgaggggctg cacccactct tgtgccccag
     2821 cagcctgagc aagtactgtc ctcggggtcc cctgcagcct ccgaggccag agacccaggt
     2881 gtgtctgagt cccctccccc agggcggcag cccaatcaga aaactctccc ccctggcccg
     2941 gacccgctcc taaggctgct gtcaacacag gctgaggaat ctcaaggccc agtgctcaag
     3001 atgcctagcc agcgagcacg gagcttcccc ctgaccaggt cccagtcctg tgagacgaag
     3061 ctacttgacg aaaagaccag caaactctat tctatcagca gccaagtgtc atcggctgtc
     3121 atgaaatcct tgctgtgcct tccatcttct atctcctgtg cccagactcc ctgcatcccc
     3181 aaggaagggg catctccaac atcatcatcc aacgaagact cagctgcaaa tggttctgct
     3241 gaaacatctg ccttggacac agggttctcg ctcaaccttt cagagctgag agaatataca
     3301 gagggtctca cggaagccaa ggaagacgat gatggggacc acagttccct tcagtctggt
     3361 cagtccgtta tctccctgct gagctcagaa gaattaaaaa aactcatcga ggaggtgaag
     3421 gttctggatg aagcaacatt aaagcaatta gacggcatcc atgtcaccat cttacacaag
     3481 gaggaaggtg ctggtcttgg gttcagcttg gcaggaggag cagatctaga aaacaaggtg
     3541 attacggttc acagagtgtt tccaaatggg ctggcctccc aggaagggac tattcagaag
     3601 ggcaatgagg ttctttccat caacggcaag tctctcaagg ggaccacgca ccatgatgcc
     3661 ttggccatcc tccgccaagc tcgagagccc aggcaagctg tgattgtcac aaggaagctg
     3721 actccagagg ccatgcccga cctcaactcc tccactgact ctgcagcctc agcctctgca
     3781 gccagtgatg tttctgtaga atctacagag gccacagtct gcacggtgac actggagaag
     3841 atgtcggcag ggctgggctt cagcctggaa ggagggaagg gctccctaca cggagacaag
     3901 cctctcacca ttaacaggat tttcaaagga gcagcctcag aacaaagtga gacagtccag
     3961 cctggagatg aaatcttgca gctgggtggc actgccatgc agggcctcac acggtttgaa
     4021 gcctggaaca tcatcaaggc actgcctgat ggacctgtca cgattgtcat caggagaaaa
     4081 agcctccagt ccaaggaaac cacagctgct ggagactcct aggcaggaca tgctgaagcc
     4141 aaagccaata acacacagct aacacacagc tcccataacc gctgattctc agggtctctg
     4201 ctgccgcccc acccagatgg gggaaagcac aggtgggctt cccagtggct gctgcccagg
     4261 cccagacctt ctaggacgcc acccagcaaa aggttgttcc taaagtaagg gcagagtcac
     4321 acgggggcag ctgatacaaa ttgcagactg tgtaaaaaga gagcttaatg ataatattgt
     4381 ggtgccacaa ataaaatgga tttattagaa tttcatatga cattcatgcc tggcttcgca
     4441 aaatgtttca agtactgtaa ctgtgtcatg attcaccccc aaacagtgac atttattttt
     4501 ctcatgaatc tgcaatgtgg gcagagattg gaatgggcag ctcatctctg tcccacttgg
     4561 catcagctgg cgtcatgcaa agtcatgcaa aggctgggac cacgtgagat cattcactca
     4621 tacatctggc cgttgatgtt ggctgggaac tcacctgggg ctgctggcct gaatgcttat
     4681 aggtggcctc tccttgtggc ctgggcctcc tcacaacatg gtgtctggat tcccaggatg
     4741 agcatcccag gatcgcaaga gccacgtaga agctgcatct tgtttatacc tttgccttgg
     4801 aagttgcatg gcatcacctc caccatactc catcagttag agctgacaca aacctgcctg
     4861 gg
//