LOCUS BC136660 4862 bp mRNA linear HUM 11-FEB-2009 DEFINITION Homo sapiens interleukin 16 (lymphocyte chemoattractant factor), mRNA (cDNA clone MGC:168273 IMAGE:9020650), complete cds. ACCESSION BC136660 VERSION BC136660.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4862) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4862) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 671 Row: b Column: 8 single stranded. FEATURES Location/Qualifiers source 1..4862 /db_xref="H-InvDB:HIT000500667" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168273 IMAGE:9020650" /tissue_type="Testicle, PCR rescued clones" /clone_lib="NIH_MGC_382" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCCCCTAT" gene 1..4862 /gene="IL16" /gene_synonym="HsT19289" /gene_synonym="IL-16" /gene_synonym="LCF" /gene_synonym="prIL-16" /db_xref="GeneID:3603" /db_xref="HGNC:HGNC:5980" /db_xref="MIM:603035" CDS 127..4122 /gene="IL16" /gene_synonym="HsT19289" /gene_synonym="IL-16" /gene_synonym="LCF" /gene_synonym="prIL-16" /codon_start=1 /product="IL16 protein" /protein_id="AAI36661.1" /db_xref="GeneID:3603" /db_xref="HGNC:HGNC:5980" /db_xref="MIM:603035" /translation="MESHSRAGKSRKSAKFRSISRSLMLCNAKTSDDGSSPDEKYPDP FEISLAQGKEGIFHSSVQLADTSEAGPSSVPDLALASEAAQLQAAGNDRGKTCRRIFF MKESSTASSREKPGKLEAQSSNFLFPKACHQRARSNSTSVNPYCTREIDFPMTKKSAA PTDRQPYSLCSNRKSLSQQLDCPAGKAAGTSRPTRSLSTAQLVQPSGGLQASVISNIV LMKGQAKGLGFSIVGGKDSIYGPIGIYVKTIFAGGAAAADGRLQEGDEILELNGESMA GLTHQDALQKFKQAKKGLLTLTVRTRLTAPPSLCSHLSPPLCRSLSSSTCITKDSSSF ALESPSAPISTAKPNYRIMVEVSLQKEAGVGLGIGLCSVPYFQCISGIFVHTLSPGSV AHLDGRLRCGDEIVEISDSPVHCLTLNEVYTILSRCDPGPVPIIVSRHPDPQVSEQQL KEAVAQAVENTKFGKERHQWSLEGVKRLESSWHGRPTLEKEREKNSAPPHRRAQKVMI RSSSDSSYMSGSPGGSPGSGSAEKPSSDVDISTHSPSLPLAREPVVLSIASSRLPQES PPLPESRDSHPPLRLKKSFEILVRKPMSSKPKPPPRKYFKSDSDPQKSLEERENSSCS SGHTPPTCGQEARELLPLLLPQEDTAGRSPSASAGCPGPGIGPQTKSSTEGEPGWRRA SPVTQTSPIKHPLLKRQARMDYSFDTTAEDPWVRISDCIKNLFSPIMSENHGHMPLQP NASLNEEEGTQGHPDGTPPKLDTANGTPKVYKSADSSTVKKGPPVAPKPAWFRQSLKG LRNRASDPRGLPDPALSTQPAPASREHLGSHIRASSSSSSIRQRISSFETFGSSQLPD KGAQRLSLQPSSGEAAKPLGKHEEGRFSGLLGRGAAPTLVPQQPEQVLSSGSPAASEA RDPGVSESPPPGRQPNQKTLPPGPDPLLRLLSTQAEESQGPVLKMPSQRARSFPLTRS QSCETKLLDEKTSKLYSISSQVSSAVMKSLLCLPSSISCAQTPCIPKEGASPTSSSNE DSAANGSAETSALDTGFSLNLSELREYTEGLTEAKEDDDGDHSSLQSGQSVISLLSSE ELKKLIEEVKVLDEATLKQLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFP NGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLTPEAMP DLNSSTDSAASASAASDVSVESTEATVCTVTLEKMSAGLGFSLEGGKGSLHGDKPLTI NRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKSL QSKETTAAGDS" BASE COUNT 1235 a 1395 c 1263 g 969 t ORIGIN 1 atggagctga gggaaggcag agctgggact catgaagtgg cagctaagcc ctgtccagtg 61 gccacccgtc agccaagggc cagagaccag gaaaggaaga aaggcagctt cacttcctct 121 ttgaggatgg agtcgcacag ccgcgctgga aagagcagaa aatctgcaaa atttcggtcc 181 atctccaggt ccctgatgct ctgtaatgct aagaccagtg atgatggctc tagccctgat 241 gagaaatatc ctgatccctt tgagatttcc ttggcccagg gcaaggaggg aattttccac 301 tcatctgtgc agctggcaga cacatcggag gctgggccca gcagtgttcc tgatctagca 361 ctggcctcgg aggctgctca actccaagca gctgggaatg atcgaggcaa gacctgtagg 421 aggatattct tcatgaagga atcttccaca gcttcctctc gagaaaagcc tggaaaacta 481 gaagcacaaa gtagtaactt cctgtttcct aaagcctgcc accaaagggc acgcagcaac 541 tcaaccagtg ttaatcccta ttgcacaaga gaaattgatt ttccaatgac caagaaatct 601 gcagcgccca cggacaggca gccttactct ctctgcagta acaggaagtc cctctctcaa 661 caattggact gtccagcagg aaaggctgcg ggaacttcga gaccaacacg gtccctgagc 721 acagctcagc tcgtgcagcc atctgggggc ctccaggctt cagtcatctc caacatcgtg 781 ctgatgaagg gccaggctaa gggtctgggc ttcagcatcg ttgggggaaa agacagcatt 841 tatggcccca ttgggattta cgtcaaaacc atttttgcag ggggagcagc agcagccgat 901 ggaaggctac aggaaggtga tgaaattctg gagctcaatg gtgaatcaat ggctggacta 961 acacatcagg atgctttgca gaagttcaag caagccaaaa aggggctcct caccctcacc 1021 gtgagaaccc gcctgacggc gcctccttcc ctgtgcagcc acctgtctcc cccactgtgc 1081 cgctccctga gctccagcac ttgtatcacc aaggacagca gctccttcgc cttggaaagc 1141 ccctcggctc ccatcagcac cgccaagccc aattacagaa tcatggtgga ggtttctctg 1201 cagaaagagg ccggcgtggg cctgggcatc ggcctgtgca gcgttcccta cttccaatgc 1261 atctctggca ttttcgtcca cacgctgtca ccaggatccg tggcgcacct ggacggacgt 1321 ctccggtgtg gggacgagat tgtggaaatc agtgattccc ctgtgcactg cctgacgctc 1381 aatgaagtct acacgatcct gagtcgctgt gatcccggtc cagtccccat cattgttagc 1441 cgacatccag acccacaggt ctctgaacag caactcaaag aagctgtggc ccaggctgtg 1501 gaaaacacca agtttggaaa ggagaggcat caatggagtc tggaaggtgt caaaaggctg 1561 gaaagcagtt ggcacgggcg gcccaccttg gagaaggaac gagagaagaa ctcagcaccc 1621 ccgcatcgca gggctcagaa ggtcatgatc cgctccagca gtgacagcag ctacatgtct 1681 gggtccccag ggggaagtcc tgggagtggc agtgctgaga agccgtcctc tgacgtggac 1741 atcagcacac acagccccag cttgcctctg gcacgggagc cagtggtgct ttctatagca 1801 tcctccaggc tgccccagga gagcccaccc ctcccagaga gccgggacag ccacccgccg 1861 ctgagactga agaaatcctt tgagattttg gtgagaaagc ctatgtcctc caagcccaag 1921 cctccaccca gaaaatactt taaaagtgac agtgaccctc agaagagtct ggaagagaga 1981 gagaactcct catgctcttc tgggcacacc ccacccacct gtggccagga agcgagagag 2041 ctgctgccac tgctgctacc acaggaagac acagcaggga gaagccctag tgcctctgcc 2101 ggctgcccag gacctggtat cggcccacag accaagtcct ccacagaggg cgagccaggg 2161 tggagaagag ccagcccagt gacccaaaca tccccgataa aacacccact gcttaagagg 2221 caggctcgga tggactatag ctttgatacc acagccgaag acccttgggt taggatttct 2281 gactgcatca aaaacttatt tagccccatc atgagtgaga accatggcca catgcctcta 2341 cagcccaatg ccagcctgaa tgaagaagaa gggacacagg gccacccaga tgggacccca 2401 ccaaagctgg acaccgccaa tggcactccc aaagtttaca agtcagcaga cagcagcact 2461 gtgaagaaag gtcctcctgt ggctcccaag ccagcctggt ttcgccaaag cttgaaaggt 2521 ttgaggaatc gtgcttcaga cccaagaggg ctccctgatc ctgccttgtc cacccagcca 2581 gcacctgctt ccagggagca cctaggatca cacatccggg cctcctcctc ctcctcctcc 2641 atcaggcaga gaatcagctc ctttgaaacc tttggctcct ctcaactgcc tgacaaagga 2701 gcccagagac tgagcctcca gccctcctct ggggaggcag caaaacctct tgggaagcat 2761 gaggaaggac ggttttctgg actcttgggg cgaggggctg cacccactct tgtgccccag 2821 cagcctgagc aagtactgtc ctcggggtcc cctgcagcct ccgaggccag agacccaggt 2881 gtgtctgagt cccctccccc agggcggcag cccaatcaga aaactctccc ccctggcccg 2941 gacccgctcc taaggctgct gtcaacacag gctgaggaat ctcaaggccc agtgctcaag 3001 atgcctagcc agcgagcacg gagcttcccc ctgaccaggt cccagtcctg tgagacgaag 3061 ctacttgacg aaaagaccag caaactctat tctatcagca gccaagtgtc atcggctgtc 3121 atgaaatcct tgctgtgcct tccatcttct atctcctgtg cccagactcc ctgcatcccc 3181 aaggaagggg catctccaac atcatcatcc aacgaagact cagctgcaaa tggttctgct 3241 gaaacatctg ccttggacac agggttctcg ctcaaccttt cagagctgag agaatataca 3301 gagggtctca cggaagccaa ggaagacgat gatggggacc acagttccct tcagtctggt 3361 cagtccgtta tctccctgct gagctcagaa gaattaaaaa aactcatcga ggaggtgaag 3421 gttctggatg aagcaacatt aaagcaatta gacggcatcc atgtcaccat cttacacaag 3481 gaggaaggtg ctggtcttgg gttcagcttg gcaggaggag cagatctaga aaacaaggtg 3541 attacggttc acagagtgtt tccaaatggg ctggcctccc aggaagggac tattcagaag 3601 ggcaatgagg ttctttccat caacggcaag tctctcaagg ggaccacgca ccatgatgcc 3661 ttggccatcc tccgccaagc tcgagagccc aggcaagctg tgattgtcac aaggaagctg 3721 actccagagg ccatgcccga cctcaactcc tccactgact ctgcagcctc agcctctgca 3781 gccagtgatg tttctgtaga atctacagag gccacagtct gcacggtgac actggagaag 3841 atgtcggcag ggctgggctt cagcctggaa ggagggaagg gctccctaca cggagacaag 3901 cctctcacca ttaacaggat tttcaaagga gcagcctcag aacaaagtga gacagtccag 3961 cctggagatg aaatcttgca gctgggtggc actgccatgc agggcctcac acggtttgaa 4021 gcctggaaca tcatcaaggc actgcctgat ggacctgtca cgattgtcat caggagaaaa 4081 agcctccagt ccaaggaaac cacagctgct ggagactcct aggcaggaca tgctgaagcc 4141 aaagccaata acacacagct aacacacagc tcccataacc gctgattctc agggtctctg 4201 ctgccgcccc acccagatgg gggaaagcac aggtgggctt cccagtggct gctgcccagg 4261 cccagacctt ctaggacgcc acccagcaaa aggttgttcc taaagtaagg gcagagtcac 4321 acgggggcag ctgatacaaa ttgcagactg tgtaaaaaga gagcttaatg ataatattgt 4381 ggtgccacaa ataaaatgga tttattagaa tttcatatga cattcatgcc tggcttcgca 4441 aaatgtttca agtactgtaa ctgtgtcatg attcaccccc aaacagtgac atttattttt 4501 ctcatgaatc tgcaatgtgg gcagagattg gaatgggcag ctcatctctg tcccacttgg 4561 catcagctgg cgtcatgcaa agtcatgcaa aggctgggac cacgtgagat cattcactca 4621 tacatctggc cgttgatgtt ggctgggaac tcacctgggg ctgctggcct gaatgcttat 4681 aggtggcctc tccttgtggc ctgggcctcc tcacaacatg gtgtctggat tcccaggatg 4741 agcatcccag gatcgcaaga gccacgtaga agctgcatct tgtttatacc tttgccttgg 4801 aagttgcatg gcatcacctc caccatactc catcagttag agctgacaca aacctgcctg 4861 gg //