LOCUS BC136576 1943 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens iroquois homeobox 6, mRNA (cDNA clone MGC:168189 IMAGE:9020566), complete cds. ACCESSION BC136576 VERSION BC136576.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1943) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1943) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 670 Row: n Column: 20. FEATURES Location/Qualifiers source 1..1943 /db_xref="H-InvDB:HIT000500588" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168189 IMAGE:9020566" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_362" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TCCGATGA" gene 1..1943 /gene="IRX6" /gene_synonym="IRX-3" /gene_synonym="IRXB3" /db_xref="GeneID:79190" /db_xref="HGNC:HGNC:14675" /db_xref="MIM:606196" CDS 275..1615 /gene="IRX6" /gene_synonym="IRX-3" /gene_synonym="IRXB3" /codon_start=1 /product="iroquois homeobox 6" /protein_id="AAI36577.1" /db_xref="GeneID:79190" /db_xref="HGNC:HGNC:14675" /db_xref="MIM:606196" /translation="MSFPHFGHPYRGASQFLASASSSTTCCESTQRSVSDVASGSTPA PALCCAPYDSRLLGSARPELGAALGIYGAPYAAAAAAQSYPGYLPYSPEPPSLYGALN PQYEFKEAAGSFTSSLAQPGAYYPYERTLGQYQYERYGAVELSGAGRRKNATRETTST LKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPKNKG GEERKAEGGEEDSLGCLTADTKEVTASQEARGLRLSDLEDLEEEEEEEEEAEDEEVVA TAGDRLTEFRKGAQSLPGPCAAAREGRLERRECGLAAPRFSFNDPSGSEEADFLSAET GSPRLTMHYPCLEKPRIWSLAHTATASAVEGAPPARPRPRSPECRMIPGQPPASARRL SVPRDSACDESSCIPKAFGNPKFALQGLPLNCAPCPRRSEPVVQCQYPSGAEAG" BASE COUNT 416 a 611 c 590 g 326 t ORIGIN 1 ttgggaaccc gcatcttctt ccttcccctg cccatccatg ggcccttctg tcttccggac 61 cccacgggcc ggaggggcgc cttccggagc gcagggctcg gcagccgggc tgccctcggc 121 tctgcctcca ctggggccaa ccaggcgaag gaaccggcgc tgggcatccg cagcggtgta 181 aggaactgag acacctcact gctgggggcg cggaacagct gggctgagac gggaactcga 241 cagggaagag agagacgggc cagggacagc caccatgtcc ttcccacact ttggacaccc 301 gtaccgcggc gcttcccagt ttctggcgtc ggcaagttcc agcaccacat gctgcgaatc 361 tacccaacgc tctgtctcag atgtggcatc aggctccacc ccagcgcccg ctctctgctg 421 cgcaccctac gatagtcgac tgctgggcag tgcgcgaccg gagctgggcg ccgccttggg 481 catctatgga gcaccctatg cggccgctgc agctgcccag agctaccctg gctacctgcc 541 ctatagccca gagcccccct cactgtatgg ggcactgaat ccacagtatg aatttaagga 601 ggctgcaggg agttttacat ccagcctggc acaaccagga gcctattatc cctatgagcg 661 gactctgggg cagtaccaat atgaacggta tggcgcagtg gaattgagtg gcgccggtcg 721 ccgaaagaac gcgacccggg agaccaccag tacactcaag gcctggctca acgagcaccg 781 caaaaacccc taccccacta agggtgagaa gatcatgctg gccatcatca ccaagatgac 841 cctcacccag gtgtccacct ggttcgccaa cgcacgccgg cgcctcaaga aagagaacaa 901 aatgacatgg gcgcccaaga acaaaggtgg ggaggagagg aaggcagagg gaggagagga 961 ggactcacta ggctgcctaa ctgctgacac caaagaagtt actgctagcc aggaggcccg 1021 ggggctccgg ctgagtgacc tggaagacct ggaggaagag gaggaggagg aggaggaagc 1081 tgaagacgag gaggtagtgg ccacagctgg ggacaggctg acggagttcc gaaagggcgc 1141 gcagtcactg cctgggccgt gcgctgcagc tcgagagggc cgattggagc gcagggagtg 1201 cggcctggct gcgccccgct tctccttcaa tgacccttcc ggatcggaag aagctgactt 1261 cctctcggcg gagacaggca gccctaggtt gaccatgcac tacccatgct tggagaaacc 1321 gcgcatctgg tctctggcgc acaccgcgac agccagcgct gttgaaggtg cacccccagc 1381 ccggcctagg ccacgaagtc ctgagtgccg tatgattcct ggacagcctc ctgcctctgc 1441 ccggcgactc tcagtcccca gagactccgc gtgcgacgag tcttcctgca tacccaaagc 1501 ctttggaaac cccaagtttg ccctgcaggg actaccgctg aactgtgcgc cgtgcccgcg 1561 gaggagcgag cctgtagtgc agtgccagta cccgtctgga gcagaagcag gttagcgcaa 1621 tggctgcgat ttgcgaaaga atcttggaaa tgggccccac gtttcgaatt catctccagg 1681 ttaagaagct gccagacctt gccagggacc aggagctctc actttgccta agagacagac 1741 acacagaaac cctcctagca gctgtccttg cacgcagagc tggggtggtg ggccgacttg 1801 aaccttagca gtccccacgg gagatggcag ggcaccttgg ggaaggccaa gtgggaagct 1861 gggaggctgc cccacccacc gactctacca agtctctctt cctcctgtgg attcagcaag 1921 gcttcctctc ctgctcaccc ctg //