LOCUS BC136480 3289 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens F-box protein 11, mRNA (cDNA clone MGC:168092
IMAGE:9020469), complete cds.
ACCESSION BC136480
VERSION BC136480.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3289)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3289)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: j Column: 19.
FEATURES Location/Qualifiers
source 1..3289
/db_xref="H-InvDB:HIT000500497"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168092 IMAGE:9020469"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TACATCTT"
gene 1..3289
/gene="FBXO11"
/gene_synonym="FBX11"
/gene_synonym="PRMT9"
/gene_synonym="UG063H01"
/gene_synonym="VIT1"
/db_xref="GeneID:80204"
/db_xref="HGNC:HGNC:13590"
/db_xref="MIM:607871"
CDS 51..2582
/gene="FBXO11"
/gene_synonym="FBX11"
/gene_synonym="PRMT9"
/gene_synonym="UG063H01"
/gene_synonym="VIT1"
/codon_start=1
/product="F-box protein 11"
/protein_id="AAI36481.1"
/db_xref="GeneID:80204"
/db_xref="HGNC:HGNC:13590"
/db_xref="MIM:607871"
/translation="MVAEESGPGAQNSPYQLRRKTLLPKRTACPTKNSMEGASTSTTE
NFGHRAKRARVSGKSQDLSAAPAEQYLQEKLPDEVVLKIFSYLLEQDLCRAACVCKRF
SELANDPILWKRLYMEVFEYTRPMMHPEPGKFYQINPEEYEHPNPWKESFQQLYKGAH
VKPGFAEHFYSNPARYKGRENMLYYDTIEDALGGVQEAHFDGLIFVHSGIYTDEWIYI
ESPITMIGAAPGKVADKVIIENTRDSTFVFMEGSEDAYVGYMTIRFNPDDKSAQHHNA
HHCLEITVNCSPIIDHCIIRSTCTVGSAVCVSGQGACPTIKHCNISDCENVGLYITDH
AQGIYEDNEISNNALAGIWVKNHGNPIIRRNHIHHGRDVGVFTFDHGMGYFESCNIHR
NRIAGFEVKAYANPTVVRCEIHHGQTGGIYVHEKGRGQFIENKIYANNFAGVWITSNS
DPTIRGNSIFNGNQGGVYIFGDGRGLIEGNDIYGNALAGIQIRTNSCPIVRHNKIHDG
QHGGIYVHEKGQGVIEENEVYSNTLAGVWVTTGSTPVLRRNRIHSGKQVGVYFYDNGH
GVLEDNDIYNHMYSGVQIRTGSNPKIRRNKIWGGQNGGILVYNSGLGCIEDNEIFDNA
MAGVWIKTDSNPTLRRNKIHDGRDGGICIFNGGRGLLEENDIFRNAQAGVLISTNSHP
ILRKNRIFDGFAAGIEITNHATATLEGNQIFNNRFGGLFLASGVNVTMKDNKIMNNQD
AIEKAVSRGQCLYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKKCHQGHDVEFIR
HDRFFCDCGAGTLSNPCTLAGEPTHDTDTLYDSAPPIESNTLQHN"
BASE COUNT 1092 a 556 c 700 g 941 t
ORIGIN
1 ctcaggagcg gaacaacgtc ggcgagcggg atgatgatgt gcctgcagat atggttgcag
61 aagaatcagg tcctggtgca caaaatagtc cataccaact tcgtagaaaa actcttttgc
121 cgaaaagaac agcgtgtccc acaaagaaca gtatggaggg cgcctcaact tcaactacag
181 aaaactttgg tcatcgtgca aaacgtgcaa gagtgtctgg aaaatcacaa gatctatcag
241 cagcacctgc tgaacagtat cttcaggaga aactgccaga tgaagtggtt ctaaaaatct
301 tctcttactt gctggaacag gatctttgta gagcagcttg tgtatgtaaa cgcttcagtg
361 aacttgctaa tgatccaatt ttgtggaaac gattatatat ggaagtattt gaatatactc
421 gccctatgat gcatcctgaa cctggaaaat tctaccagat taatccagaa gagtatgaac
481 atccaaatcc ctggaaagag agtttccagc agttgtataa aggtgcacat gtaaagccag
541 gatttgctga acatttctac agtaaccctg caagatataa aggaagagaa aatatgttgt
601 attatgatac tattgaagat gcccttggtg gggtacaaga ggctcatttt gatggactta
661 tctttgttca ttctggaata tatactgatg aatggatata tattgaatct ccaatcacca
721 tgattggtgc agcacctggg aaagtggcag acaaagttat aattgaaaac actagagatt
781 caaccttcgt ttttatggaa ggctctgaag atgcttatgt tggatatatg acaataaggt
841 ttaaccctga tgacaaatct gcacaacacc acaatgcaca ccactgctta gagattacag
901 taaattgtag ccctattatt gatcactgta tcatccgaag tacatgtaca gttggttctg
961 cagtatgtgt tagtggtcaa ggagcatgtc ccaccatcaa gcactgtaac atcagtgact
1021 gtgaaaatgt tggactatat ataacagatc atgcacaggg aatatatgag gataatgaaa
1081 tttccaataa tgcgttagct gggatttggg ttaaaaatca tggaaaccca attattagac
1141 ggaatcatat tcatcatgga cgtgatgttg gtgtgttcac atttgatcat ggcatgggtt
1201 actttgaaag ttgcaatata cacagaaata ggatagcagg ctttgaagta aaagcctatg
1261 ctaaccctac agtggttcga tgtgaaattc accatgggca gactggagga atatatgtcc
1321 atgaaaaagg aagaggacaa ttcatagaga ataaaatcta tgcaaacaac tttgcaggtg
1381 tatggattac ctcaaatagt gacccaacaa taaggggaaa ttctatattt aatggaaatc
1441 aaggaggagt ttacatcttt ggtgatggac gaggccttat tgaaggaaat gacatttatg
1501 gcaatgcatt agcaggaatt caaattagga caaacagttg tccaattgtt cggcataaca
1561 aaattcatga tggccagcat ggtgggattt atgtgcatga aaagggacaa ggagtaatag
1621 aagagaatga agtttatagt aacactctag ctggagtctg ggtgacaact ggcagcactc
1681 cagtactgag aagaaaccgg atacacagtg gcaagcaggt tggtgtttat ttttatgaca
1741 atggacatgg agtgctagaa gacaatgata tctataatca tatgtattca ggggttcaga
1801 taaggactgg aagcaacccc aaaattagac gcaacaaaat ctggggagga cagaatggtg
1861 gaattctagt ttataattct ggtctaggct gtatagaaga caatgaaata tttgacaatg
1921 caatggctgg agtctggatt aagacagata gtaatcctac actaagaaga aataaaatcc
1981 atgatggaag agatggtggc atctgtatat ttaatggggg tcgaggtctc cttgaagaaa
2041 atgatatttt caggaatgct caagcaggtg ttctcatcag cactaatagt catccaatct
2101 taaggaaaaa cagaatattt gatggatttg ccgcaggtat tgaaattaca aatcacgcaa
2161 ctgcaacact agaaggcaat cagattttta acaaccggtt tggaggctta tttttagcat
2221 ctggtgttaa tgtgacaatg aaagataaca aaataatgaa caatcaagat gccatagaaa
2281 aggctgttag tagaggccaa tgtttatata aaatatcaag ttataccagc tatcccatgc
2341 atgatttcta cagatgtcat acttgtaaca ccacagatcg aaatgccata tgtgtgaact
2401 gcattaagaa gtgccatcag ggacatgatg tagagtttat tagacatgat aggtttttct
2461 gtgactgtgg tgctggaaca ctgtctaatc cttgtacatt agctggtgag cctacacatg
2521 atacagatac actatatgac tctgctccac ctatagaatc taatacattg cagcacaact
2581 gaattccttc cctaaagaaa aagtcctgcc attgtaacat cataacttaa aacacttttt
2641 tggaagaaga tttaaaatat ttgcccatgc tacaggaaga gactgtatta aaaatggata
2701 cacaaggtca gttgacacta tgaagctcaa gctaccaaaa agaaagtggc aatatattga
2761 ctcaggatct caaagctggg tgttttagca ttactgtgta aagacttgaa gggacagaag
2821 tgaagaaaat aagctgcaat tttgtacaga taccaacttc tgaaaagctg gtgtttttac
2881 aactagcatt gaatgcagtc caatttgcag tagtaatctt caatagacaa gcagctttgt
2941 tgctgccttt atggacatgg gtaccaattg cttttgtaat atggtaaaaa tgtgagctag
3001 cacttctgcg ttccttttga tttttttttt ttaacatgta ttcagattga gaaatatgat
3061 tttaatgctt taatctcatg tagtttgttt ttaatttcaa gcaaaatctt actgtacttg
3121 aatgtgccct gttttgttag cacacctaga cttgctgtaa ctgtactcat gtcccagtat
3181 gtacgttctt tctatgaaag agaaaacact aatcttaaat tatatccagc aatgtttctg
3241 gtatccttta agaaaagtta agactattat ttccttccct tccctgtgc
//