LOCUS BC136413 4123 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens family with sequence similarity 120C, mRNA (cDNA clone
MGC:168024 IMAGE:9020401), complete cds.
ACCESSION BC136413
VERSION BC136413.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4123)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4123)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: g Column: 23.
FEATURES Location/Qualifiers
source 1..4123
/db_xref="H-InvDB:HIT000500435"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168024 IMAGE:9020401"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_312"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: GATCATGG"
gene 1..4123
/gene="FAM120C"
/gene_synonym="ORF34"
/db_xref="GeneID:54954"
/db_xref="HGNC:HGNC:16949"
CDS 58..3348
/gene="FAM120C"
/gene_synonym="ORF34"
/codon_start=1
/product="family with sequence similarity 120C"
/protein_id="AAI36414.1"
/db_xref="GeneID:54954"
/db_xref="HGNC:HGNC:16949"
/translation="MGVQGFQEFLEKRCPGAVVPVDLLKLARTVSRQQQQQHLHRQLP
PTAALAPGAPRAARGSVPLQPPLPPAALGAYSGGAGPTRHHHPAHHFHHHGQAQPGLH
PPLPPPPPPQLPGARVLVDAGSALPRLYGGYQTDWVCGGQWNAMLGYLSALCQACAYP
GGDGLELVVMFPGGLGKDRLAEWGRRCQAERQTAQLIVGHVGNKGTPPPRAWFLPPAC
LSHCVRLALIRFRVKVFQSLEDHHLEVVAFFRENGFHGLLAHDSEYALYNIPSYYSSH
ALKLSWNGKNLTTNQFLMQEVAKQLGLKRMNFPIFAALLGNHILPDEDLAAFHWSLLG
PEHPLASLKVRAHQLVLPPCDVVIKAVSEYVSSIKDPSNLDVVGKDVFKQSQSRTEDK
IERFKKAVEYYSVTTKLSSLPVGPSFLGFRNNRLGNPPLPRNQVGTISAGKPMFSHQV
PQKVKYPPPFPVGPNSSLLFSSHALGESHAFSEDPMLQNSPFANWAVSYDSSASQFPN
YLPSKASPPLGPDSSHSSSSDGDEPNGASSDHITEAFHHQPEWGNPNRDRGSWAQPVD
TGVSEASLGDGEPHIPSLLSMSTRNHMDITIPPLPPVAPEVLRVAEHRHRRGLMYPYI
YHVLTKGEIKIPVCIEDECNMELPPAALLFRSARQYVYGVLFSLAETQRKMERLAMRR
RLPVEVPSVILKEWSAYKGKSPQTPELVSALTFREWTCPNLKKLWLGKAVEDKNRRMR
AFLACMKSDTPSMLNPANVPTHLLLMCCVLRYMVQWPGGRILHRHELDTFLAQAVSTQ
LYEPDRLQELKIEKLDARGIQLAALFMSGVDTALFANDACGQPVPWEHCCPWIYFDGK
LFQSKLIKAGRERVSLVELCDGQADLATKVEKMRQSILEGVNMNHPPPSALLPSPTFV
PPMVPSLYPVSLYSRAMGSMPLPPQGRSRGFAGLHPIPPQGGKLEIAGMVVGQWAGSR
SSRGRGSFGMQVVSVGGPGKGHGKEQTGRGSKGHKKGNKQGSSDGVSKSLELHQGRSR
SQVNGNSGALIKEEKSDHRLPAPSQCALSRDSNECNNGNRYLPMNNREKNHLQEQKLE
TVAQRKED"
BASE COUNT 950 a 1113 c 1029 g 1031 t
ORIGIN
1 cagatcgtcg cctatcctgc ttgcgcagcc gctatcgcgt ctgcccaccg acgaagcatg
61 ggtgtccagg gcttccaaga gttcctggag aagcgctgtc ccggggccgt ggtgcccgtg
121 gacctcctaa aactcgcgcg cacggtctcg cgccagcagc agcagcagca cttgcaccgc
181 cagctgccgc cgactgcagc cctagcgccc ggggctccac gcgccgccag gggctccgtg
241 cctctgcaac cgccgcttcc gcccgctgcc ttgggtgcct actccggggg cgcggggccg
301 actcggcacc atcaccccgc tcaccacttc caccatcatg gccaagcgca gcccgggctg
361 caccctccgc tgccgccgcc gccgccccct cagctgcccg gggcccgggt gctggtggac
421 gccggctcgg cgctgccgcg gctctatggc ggctaccaga cggattgggt gtgtggcggc
481 caatggaacg ccatgctggg ctacttgtca gcgctgtgcc aggcttgtgc ctatcctggc
541 ggcgacggcc tggagctcgt ggtcatgttc ccggggggcc tgggcaagga ccggctggcc
601 gagtggggcc gtcggtgcca ggccgagcgg cagacagcgc aactgatcgt gggacacgtg
661 ggcaacaagg gcacccctcc accgcgggcc tggttcctgc caccggcctg cctgagccac
721 tgcgtgaggc tagcactcat ccgcttccgg gtcaaggtct ttcagagcct tgaagaccac
781 catttggaag tggtggcgtt tttcagggaa aatggcttcc atggccttct tgcccatgac
841 tccgagtatg ctctctacaa tattccctct tactacagtt cccatgctct gaaactgagc
901 tggaatggga agaacctcac taccaaccag ttcctgatgc aagaagtagc caagcagctg
961 ggcctgaaga ggatgaattt ccccatattt gctgcactgc taggtaacca catcctccca
1021 gatgaggacc tggctgcttt tcactggagc ctcttgggac cagaacatcc tcttgcatca
1081 cttaaggttc gagctcatca gctggttctt cctccctgtg acgtggtgat caaggctgtt
1141 tctgagtatg tcagttccat caaagatccc tcaaacctgg atgtagttgg gaaggatgtt
1201 ttcaaacagt ctcagtccag gacagaagat aaaatagagc gattcaagaa agcagttgag
1261 tattattcag tcacaaccaa actctcttcg ctgccagtgg gtccctcctt tctaggtttt
1321 cggaataata ggcttggaaa tcctcccctt ccacgaaatc aagtgggcac catttctgct
1381 ggaaagccaa tgttttctca tcaagtgccc cagaaagtga aatatccacc accattccca
1441 gtgggaccca actcatctct tctcttctcc tcccatgctt tgggggaatc ccatgctttt
1501 tctgaggatc ccatgctgca gaacagcccc tttgccaatt gggctgtctc ctatgactct
1561 tctgcatccc agtttcccaa ttacctgcct tctaaagcct cacctccttt gggaccagac
1621 tcttcccact cctcttcctc tgatggtgat gagccaaatg gagctagctc tgatcatatc
1681 acagaagcat ttcatcacca gcctgagtgg ggaaatccca atcgtgacag agggtcctgg
1741 gcacagcctg ttgatactgg agtttcagaa gcgagcctag gtgatggtga gccccacatc
1801 ccatctctgc tgtctatgtc tacaaggaac cacatggata tcaccattcc acccttacct
1861 ccagtagctc cagaagtctt gagagttgct gaacacagac accggagggg tcttatgtac
1921 ccatatatct accatgtcct cactaagggt gaaattaaga tccccgtatg tattgaggat
1981 gagtgtaaca tggagctgcc tccagctgct ctcttattcc ggtcagctcg tcaatatgta
2041 tatggagttc tttttagtct ggcagagaca cagaggaaaa tggaacgctt ggccatgcga
2101 cggcggctgc ctgtggaagt tccttcagtg atccttaaag agtggtctgc ctataaaggg
2161 aagtcacctc aaacccctga gctggtgtct gcactgacat ttcgggaatg gacttgccca
2221 aacctcaaga agctctggct aggcaaagca gttgaagaca agaacagaag gatgcgggcc
2281 ttcctggcct gtatgaagtc ggacacgccc agtatgctca atccagctaa tgtccccacc
2341 catctgctgc tcatgtgttg tgtactccgg tacatggttc agtggcctgg tggccgaatc
2401 ctgcatcgcc atgagctaga caccttcctt gcacaggcag tgtctaccca gctttatgaa
2461 ccagatcgac tccaagaact caagattgag aaactggatg cccgagggat ccagcttgct
2521 gccctcttca tgagtggagt cgacacagct ctgtttgcta atgatgcctg tggccagcca
2581 gtcccttggg agcattgctg tccatggatt tactttgatg gcaagctgtt ccagagcaag
2641 ctaattaaag caggccgaga gcgagtatct ctggttgagc tctgtgatgg ccaggctgac
2701 ctggcaacca aagtggaaaa gatgagacag agcatccttg aaggagtcaa catgaatcat
2761 ccaccgcctt ctgctctact tccgtcacct acttttgtgc ctcccatggt gccctctctc
2821 taccctgttt cactttattc ccgagctatg ggctccatgc cacttccccc tcaagggagg
2881 agccggggat ttgcaggtct ccatccaatc ccaccccaag gaggaaaact ggagattgct
2941 gggatggttg tgggccagtg ggctggcagc agatcctcca ggggccgagg atccttcggc
3001 atgcaagtgg tttctgtcgg tgggccagga aaggggcatg gaaaagaaca gactggtaga
3061 ggatccaagg gacacaaaaa aggaaataag caaggctctt cagatggagt ttctaaatcc
3121 ctggagcttc atcaaggtcg gtctcgctcc caggtaaatg gaaacagtgg cgcattgatc
3181 aaggaagaga agagtgatca tcgtcttcca gctccatcac aatgtgcctt atccagagac
3241 agcaatgagt gtaataatgg taaccgctac ctccctatga ataataggga gaagaaccac
3301 ttacaagagc aaaagctaga aactgtggca caacggaaag aggactgata agctgaagat
3361 ggcttcacca aaccaggaag agggaaaaac ttttactttt ctgattttag gcccaagcta
3421 gaggaggata taaatgctta ccctagattt ctccaggatt ttggtgggat gtcctattgt
3481 gtccatcttt tccccttccc tgcctgtttc tgggacttca gattcagtgg tctgtttctg
3541 gagaagttct ggtcaaagat gaatggcagt aagactaggt cctagtctca aattgaagat
3601 atagcaccaa tagtttattt atctcctctg ggagcctagt aaggcagtag ctgtcagaaa
3661 ttgggtatca tcacataagg tcctatagaa aagctctagc tttggttttt ctgagcattt
3721 ataatgatac tcattatcaa agacttatat gataaaccta tgaggttgtg gggacagctg
3781 tggcctcctg aggttttttt ttgttttttt tttttctcta tgaagtggta tctacctctt
3841 cttcactcct tccaacttac ctacccctgg attttgtacc accacctcta gctttggcct
3901 gacaatcaga taggtagatg ttttcagaaa agtaaggtag tattggttat tttaattttt
3961 attttttatt ttatacactt caaaaaaaac tatcaatggc ctttgtactg ggggattcaa
4021 gtgaatcaga aaagtactgg gcagattttt cctgcctctc aaccagtgca ttgtttgtaa
4081 aatagaagat gtggcacagt tcattcactc cctattgccc aca
//