LOCUS BC136409 2307 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens calcium channel, voltage-dependent, beta 2 subunit,
mRNA (cDNA clone MGC:168020 IMAGE:9020397), complete cds.
ACCESSION BC136409
VERSION BC136409.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2307)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2307)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: g Column: 19.
FEATURES Location/Qualifiers
source 1..2307
/db_xref="H-InvDB:HIT000500431"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:168020 IMAGE:9020397"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCCCGTTC"
gene 1..2307
/gene="CACNB2"
/gene_synonym="CAVB2"
/db_xref="GeneID:783"
/db_xref="HGNC:HGNC:1402"
/db_xref="MIM:600003"
CDS 24..2006
/gene="CACNB2"
/gene_synonym="CAVB2"
/codon_start=1
/product="calcium channel, voltage-dependent, beta 2
subunit"
/protein_id="AAI36410.1"
/db_xref="GeneID:783"
/db_xref="HGNC:HGNC:1402"
/db_xref="MIM:600003"
/translation="MVQRDMSKSPPTAAAAVAQEIQMELLENVAPAGALGAAAQSYGK
GARRKNRFKGSDGSTSSDTTSNSFVRQGSADSYTSRPSDSDVSLEEDREAVRREAERQ
AQAQLEKAKTKPVAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWI
GRLVKEGCEIGFIPSPVKLENMRLQHEQRAKQGKFYSSKSGGNSSSSLGDIVPSSRKS
TPPSSAIDIDATGLDAEENDIPANHRSPKPSANSVTSPHSKEKRMPFFKKTEHTPPYD
VVPSMRPVVLVGPSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLN
NPSKHAIIERSNTRSSLAEVQSEIERIFELARTLQLVVLDADTINHPAQLSKTSLAPI
IVYVKISSPKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPELFDVILDENQLEDAC
EHLADYLEAYWKATHPPSSSLPNPLLSRTLATSSLPLSPTLASNSQGSQGDQRTDRSA
PIRSASQAEEEPSVEPVKKSQHRSSSSAPHHNHRSGTSRGLSRQETFDSETQESRDSA
YVEPKEDYSHDHVDHYASHRDHNHRDETHGSSDHRHRESRHRSRDVDREQDHNECNKQ
RSRHKSKDRYCEKDGEVISKKRNEAGEWNRDVYIRQ"
BASE COUNT 661 a 575 c 546 g 525 t
ORIGIN
1 cgctccgagc cgacttttcg ccaatggtcc aaagggacat gtccaagtcg cctcccacag
61 cggcggcggc ggtggcgcag gagatccaga tggaactgct agagaacgtg gctcccgcgg
121 gggcgctcgg agccgccgca cagtcatatg gaaaaggagc cagaaggaaa aacagattta
181 aaggatctga tggaagcacg tcatctgata ctacctcaaa tagttttgtt cgccagggtt
241 cggcagactc ctacactagc cgtccatccg attccgatgt atctctggag gaggaccggg
301 aggcagtgcg cagagaagcg gagcggcagg cccaggcaca gttggaaaaa gcaaagacaa
361 agcccgttgc atttgcggtt cggacaaatg tcagctacag tgcggcccat gaagatgatg
421 ttccagtgcc tggcatggcc atctcattcg aagcaaaaga ttttctgcat gttaaggaaa
481 aatttaacaa tgactggtgg atagggcgat tggtaaaaga aggctgtgaa atcggattca
541 ttccaagccc agtcaaacta gaaaacatga ggctgcagca tgaacagaga gccaagcaag
601 ggaaattcta ctccagtaaa tcaggaggaa attcatcatc cagtttgggt gacatagtac
661 ctagttccag aaaatcaaca cctccatcat ctgctataga catagatgct actggcttag
721 atgcagaaga aaatgatatt ccagcaaacc accgctcccc taaacccagt gcaaacagtg
781 taacgtcacc ccactccaaa gagaaaagaa tgcccttctt taagaagaca gagcacactc
841 ctccgtatga tgtggtacct tccatgcgac cagtggtcct agtgggccct tctctgaagg
901 gctacgaggt cacagatatg atgcaaaaag cgctgtttga ttttttaaaa cacagatttg
961 aagggcggat atccatcaca agggtcaccg ctgacatctc gcttgccaaa cgctcggtat
1021 taaacaatcc cagtaagcac gcaataatag aaagatccaa cacaaggtca agcttagcgg
1081 aagttcagag tgaaatcgaa aggatttttg aacttgcaag aacattgcag ttggtggtcc
1141 ttgacgcgga tacaattaat catccagctc aactcagtaa aacctccttg gcccctatta
1201 tagtatatgt aaagatttct tctcctaagg ttttacaaag gttaataaaa tctcgaggga
1261 aatctcaagc taaacacctc aacgtccaga tggtagcagc tgataaactg gctcagtgtc
1321 ctccagagct gttcgatgtg atcttggatg agaaccagct tgaggatgcc tgtgagcacc
1381 ttgccgacta tctggaggcc tactggaagg ccacccatcc tcccagcagt agcctcccca
1441 accctctcct tagccgtaca ttagccactt caagtctgcc tcttagcccc accctagcct
1501 ctaattcaca gggttctcaa ggtgatcaga ggactgatcg ctccgctcct atccgttctg
1561 cttcccaagc tgaagaagaa cctagtgtgg aaccagtcaa gaaatcccag caccgctctt
1621 cctcctcagc cccacaccac aaccatcgca gtgggacaag tcgcggcctc tccaggcaag
1681 agacatttga ctcggaaacc caggagagtc gagactctgc ctacgtagag ccaaaggaag
1741 attattccca tgaccacgtg gaccactatg cctcacaccg tgaccacaac cacagagacg
1801 agacccacgg gagcagtgac cacagacaca gggagtcccg gcaccgttcc cgggacgtgg
1861 atcgagagca ggaccacaac gagtgcaaca agcagcgcag ccgtcataaa tccaaggatc
1921 gctactgtga aaaggatgga gaagtgatat caaaaaaacg gaatgaggct ggggagtgga
1981 acagggatgt ttacatccgc caatgagttt tgcccttttg tgtttttttt tttttttttt
2041 gaagtcttgt ataactaaca gcatccccaa aacaaaaagt ctttggggtc tacactgcaa
2101 tcatatgtga tctgtcttgt aatattttgt attattgctg ttgcttgaat agcaatagca
2161 tggatagagt attgagatac tttttctttt gtaagtgcta cataaattgg cctggtatgg
2221 ctgcagtcct ccggttgcat actggactct tcaaaaactg ttttgggtag ctgccacttg
2281 aacaaaatct gttgccaccc aggtgat
//