LOCUS BC136403 2145 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens T-box 4, mRNA (cDNA clone MGC:168013 IMAGE:9020390), complete cds. ACCESSION BC136403 VERSION BC136403.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2145) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2145) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 670 Row: g Column: 12. FEATURES Location/Qualifiers source 1..2145 /db_xref="H-InvDB:HIT000500425" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168013 IMAGE:9020390" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_362" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: AGGAACAT" gene 1..2145 /gene="TBX4" /gene_synonym="SPS" /db_xref="GeneID:9496" /db_xref="HGNC:HGNC:11603" /db_xref="MIM:601719" CDS 28..1665 /gene="TBX4" /gene_synonym="SPS" /codon_start=1 /product="T-box 4" /protein_id="AAI36404.1" /db_xref="GeneID:9496" /db_xref="HGNC:HGNC:11603" /db_xref="MIM:601719" /translation="MLQDKALSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAAL GSPPGPGADVVAAAAAEQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKV KVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAH WMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHV FPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMR QRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFY HCLKRRDGTRHLDLPCKRSYLEAPSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPREAC MYSGSGPEIAGVSGVDDLPPPPLSCNMWTSVSPYTSYSVQTMETVPYQPFPTHFTATT MMPRLPTLSAQSSQPPGNAHFSVYNQLSQSQVRERGPSASFPRERGLPQGCERKPPSP HLNAANEFLYSQTFSLSRESSLQYHSGMGTVENWTDG" BASE COUNT 475 a 653 c 580 g 437 t ORIGIN 1 actcgttgtg tgctgtgccc gcaggagatg ctgcaggata aggccctgtc cgagagcgag 61 gaggccttcc gggccccggg cccagcgctc ggagaggcca gcgcagccaa cgcccccgag 121 cccgcgctgg cagcgccggg cctcagcgga gccgcgctag gcagcccccc gggacccggg 181 gccgacgtcg tcgccgccgc cgccgcggag cagaccatcg agaacatcaa ggtggggctg 241 catgagaagg agctctggaa gaagttccac gaggcgggca ccgagatgat catcactaag 301 gcgggcagga ggatgttccc cagctacaag gtaaaagtca caggcatgaa ccccaagacc 361 aagtatatcc tgctgattga cattgtccct gccgatgacc atcgctacaa gttctgtgac 421 aacaaatgga tggtggcagg gaaggctgag ccagccatgc caggaaggct gtatgtccac 481 ccggattctc ctgccacagg agcccactgg atgcggcagc tggtctcctt ccagaagctg 541 aagctgacaa acaaccacct ggaccccttt ggccatatca tcctcaactc tatgcacaag 601 taccagccgc ggctccacat cgttaaggct gatgagaaca atgctttcgg ctccaaaaac 661 actgctttct gcacccacgt gttcccagag acctccttca tctctgtgac ctcctaccag 721 aatcacaaga tcacccagct gaaaattgag aacaaccctt ttgccaaggg attccggggc 781 agtgatgaca gtgacctgcg tgtggcccga ctgcagagca aagaataccc cgtgatttcc 841 aaaagcatca tgaggcagag gctcatctcc ccccagctct cagccacacc ggacgtgggc 901 cccctgctcg gcacccacca ggcactccag cactaccagc acgagaacgg ggcacactca 961 cagctcgcgg agccgcagga cctgcccctc agcacctttc ccacccagag ggactcaagc 1021 ctcttctatc actgcctgaa aagacgagac ggtacccgcc acctggactt accttgcaag 1081 cgatcctatc tggaagcccc ctcttcggtg ggggaggatc actatttccg ttccccccct 1141 ccctacgacc agcaaatgct gagcccctcc tactgcagtg aggtgacccc cagagaagca 1201 tgtatgtact caggttcagg gcccgagatt gccggggtgt ctggggtgga cgacctgccc 1261 ccacctccgc tgagctgtaa catgtggact tcagtgtcgc cgtacaccag ctatagcgtg 1321 cagacgatgg agactgtgcc gtaccagccc ttccccacgc acttcaccgc caccaccatg 1381 atgccgcggc tgcccaccct ctccgctcag agctcccagc caccaggaaa tgcccacttt 1441 agtgtctaca atcagctctc ccagtctcag gtccgagagc gggggcccag cgcctcattc 1501 ccaagagagc gcggcctccc ccaagggtgt gagaggaagc caccctcgcc acatctaaat 1561 gctgccaatg agtttctcta ctctcaaacc ttctccttgt cccgagaatc ttccttacag 1621 taccattcag gaatggggac tgtggagaac tggactgacg gatgactctc acgtctcctc 1681 catagccccg ggaccgtgtt gctccagtat taacctctgt gggtggcctg cactctacca 1741 agaaacacag gaaggtattc cagtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt 1801 gtatacacga gcatgtatgt atttggagag catccatctt ctgacataca actgaggtca 1861 tgacaaggaa aaaaaacacc acatttatct aagaagtgat tttggctgca ggacctgggt 1921 ctattgttat ctgacatctc ttgacatgcc cgtgggtggg atgggagtgg agggttcata 1981 tgagttattg agagggtttt ataatggttg atttactcag gggccaggtg gggagttctc 2041 tcccatgggg aaagattctc actgctgggg tgggaagatt ctcgctgctg gggtgtgagg 2101 actctgtgca caccttagag ttcctggcct tctctttgca agggg //