LOCUS BC136345 2401 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens POU class 4 homeobox 2, mRNA (cDNA clone MGC:167955
IMAGE:9020332), complete cds.
ACCESSION BC136345
VERSION BC136345.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2401)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2401)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: e Column: 2
single stranded.
FEATURES Location/Qualifiers
source 1..2401
/db_xref="H-InvDB:HIT000500371"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167955 IMAGE:9020332"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GTCATGGG"
gene 1..2401
/gene="POU4F2"
/gene_synonym="Brn-3b"
/gene_synonym="BRN3.2"
/db_xref="GeneID:5458"
/db_xref="HGNC:HGNC:9219"
/db_xref="MIM:113725"
CDS 153..1385
/gene="POU4F2"
/gene_synonym="Brn-3b"
/gene_synonym="BRN3.2"
/codon_start=1
/product="POU class 4 homeobox 2"
/protein_id="AAI36346.1"
/db_xref="GeneID:5458"
/db_xref="HGNC:HGNC:9219"
/db_xref="MIM:113725"
/translation="MMMMSLNSKQAFSMPHGGSLHVEPKYSALHSTSPGSSAPIAPSA
SSPSSSSNAGGGGGGGGGGGGGGGGRSSSSSSSGSSGGGGSEAMRRACLPTPPSNIFG
GLDESLLARAEALAAVDIVSQSKSHHHHPPHHSPFKPDATYHTMNTIPCTSAASSSSV
PISHPSALAGTHHHHHHHHHHHHQPHQALEGELLEHLSPGLALGAMAGPDGAVVSTPA
HAPHMATMNPMHQAALSMAHAHGLPSHMGCMSDVDADPRDLEAFAERFKQRRIKLGVT
QADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSHREK
LTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRV
WFCNQRQKQKRMKYSAGI"
BASE COUNT 562 a 681 c 610 g 548 t
ORIGIN
1 aggcgtacag agtccggagg cggcggcggg tgagctcaac ttcgcacagc ccttcccagc
61 tccagccccg gctggcccgg cacttctcgg agggtcccgg cagccgggac cagtgagtgc
121 ctctacggac cagcgccccg gcgggcggga agatgatgat gatgtccctg aacagcaagc
181 aggcgtttag catgccgcac ggcggcagcc tgcacgtgga gcccaagtac tcggcactgc
241 acagcacctc gccgggctcc tcggctccca tcgcgccctc ggccagctcc cccagcagct
301 cgagcaacgc tggtggtggc ggcggcggcg gcggcggcgg cggcggcggc ggcggaggcc
361 gaagcagcag ctccagcagc agtggcagca gcggcggcgg gggctcggag gctatgcgga
421 gagcctgtct tccaacccca ccgagcaata tattcggcgg gctggatgag agtctgctgg
481 cccgcgccga ggctctggca gccgtggaca tcgtctccca gagcaagagc caccaccacc
541 atccacccca ccacagcccc ttcaaaccgg acgccaccta ccacactatg aataccatcc
601 cgtgcacgtc ggccgcctct tcttcatcgg tgcccatctc gcacccttcc gcgttggcgg
661 gcacgcacca ccaccaccac catcaccacc accaccacca ccaaccgcac caggcgctgg
721 agggcgagct gctggagcac ctgagtcccg ggctggccct gggcgctatg gcgggccccg
781 acggcgctgt ggtgtccacg ccggctcacg cgccgcacat ggccaccatg aaccccatgc
841 accaagcagc gctcagcatg gcccacgcgc acgggctgcc gtcgcacatg ggctgcatga
901 gcgacgtgga cgccgacccg cgggacctgg aggcattcgc cgagcgcttc aagcagcgac
961 gcatcaagct gggggtgacc caggcagatg tgggctccgc gctggccaac ctcaagatcc
1021 ccggcgtggg ctcgcttagc cagagcacca tctgcaggtt cgagtccctc acactgtccc
1081 acaataatat gatcgcgctc aaacccatcc tgcaggcatg gctcgaggag gccgagaagt
1141 cccaccgcga gaagctcacc aagcctgaac tcttcaatgg cgcggagaag aagcgcaagc
1201 gcacgtccat cgctgcgcca gagaagcgct cgctcgaagc ctactttgcc attcagcctc
1261 ggccctcctc tgaaaagatc gccgccatcg cggagaagct ggacctgaag aaaaacgtgg
1321 tgcgcgtctg gttctgcaac cagaggcaga aacagaaaag aatgaaatat tccgccggca
1381 tttagaagac tcttggcctc tccagagacg cccctttcct cgtccgctct tttctctcct
1441 ctcttctgcc tcttttcact tttggcgact agaaacaatt ccagtaaatg tgaatctcga
1501 caaatcgagg actgaagagg gagcgaacga gcgaacaact gagcccaagc cggtgagaat
1561 gtgaaacagt ttctcaaagg aaagaataac aaaagatggt atttgtctgt tgtagcaaag
1621 ttgtcccttt gaaccccacc tcggcttctt cagaggaagt gtggagatgg ctgtttgcag
1681 gaaggcagac gagacagtgt ttaaaaagtc cacaagaatg atcaagtaag atttgttttt
1741 attcttacag acatcacccg tgttcaagtt taaaagtaca ctttgcaact atttttcaga
1801 aatagaaatt gattcaggac taaaacttta aactagagtt gatgcttaat gtgatagaga
1861 catctctaaa gtattttgaa ttttaaaaaa agatggcaga ttttctgcat ttacactgta
1921 tattatatat atatttttat tgtggttctt accccctttt ccttctctga agtgttaatg
1981 cttaagaaaa gagttgcgcc tgctgtgttc actgatcttg aaagctatta ttagattatt
2041 gcagaacaac cctctgtaaa ttattaattt atctctctag caacttaatt ttgtgcacat
2101 tctaattaat taaacttctt ccgtctaaaa aaagtggggg aaatgtatag ctagtaacgt
2161 tcaaaaaatt ttgtttgatg agtttaccga atttttacag ctttcctcct atactgtgtt
2221 ccttttgacc catttgtata ttctcacttg aatgaagatt gtttttttct ttgtttttac
2281 tggtagtgtt ctgatttgtg agtcgacact cagtaatgga tgtcttaatc gtgtagacct
2341 gattcactgt ctgaagtatt gtttacttcg ttacatattt aatggggatt cccacattgt
2401 c
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