LOCUS BC136335 2834 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens lipoma HMGIC fusion partner-like 2, mRNA (cDNA clone
MGC:167945 IMAGE:9020322), complete cds.
ACCESSION BC136335
VERSION BC136335.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2834)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: d Column: 16.
FEATURES Location/Qualifiers
source 1..2834
/db_xref="H-InvDB:HIT000500362"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167945 IMAGE:9020322"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GGCTACGT"
gene 1..2834
/gene="LHFPL2"
/db_xref="GeneID:10184"
/db_xref="HGNC:HGNC:6588"
/db_xref="MIM:609718"
CDS 28..714
/gene="LHFPL2"
/codon_start=1
/product="lipoma HMGIC fusion partner-like 2"
/protein_id="AAI36336.1"
/db_xref="GeneID:10184"
/db_xref="HGNC:HGNC:6588"
/db_xref="MIM:609718"
/translation="MCHVIVTCRSMLWTLLSIVVAFAELIAFMSADWLIGKARSRGGV
EPAGPGGGSPEPYHPTLGIYARCIRNPGVQHFQRDTLCGPYAESFGEIASGFWQATAI
FLAVGIFILCMVALVSVFTMCVQSIMKKSIFNVCGLLQGIAGLFLILGLILYPAGWGC
QKAIDYCGHYASAYKPGDCSLGWAFYTAIGGTVLTFICAVFSAQAEIATSSDKVQEEI
EEGKNLICLL"
BASE COUNT 771 a 641 c 663 g 759 t
ORIGIN
1 gactctttct tcgcccggaa catcaatatg tgtcatgtca ttgtcacctg tcgctcgatg
61 ctctggacct tgctgagtat tgtggtggct tttgccgagc tcattgcctt catgagtgca
121 gactggctga tcgggaaagc gaggagccgc ggcggcgtgg agccggcggg cccgggcggg
181 ggctccccgg agccctacca ccccaccctg ggcatctacg cccgctgcat ccggaaccca
241 ggggtgcagc acttccagcg ggacacgctg tgcgggccct acgccgagag cttcggcgag
301 atcgccagcg gcttctggca ggccacagct attttcctgg ctgtgggaat ctttattctc
361 tgcatggtgg ccttggtgtc cgtcttcacc atgtgtgtac agagcatcat gaagaaaagc
421 atcttcaatg tctgtgggct gttgcaagga attgcaggtc tattccttat cctcggtttg
481 atactctacc ctgctggctg gggttgccag aaggccatag actactgtgg acattatgca
541 tctgcctaca aacctggaga ctgctccttg ggctgggcct tttataccgc cattgggggc
601 acagtcctca ctttcatctg tgctgtcttc tctgcacaag cagaaattgc aacctctagt
661 gacaaagtac aggaagaaat tgaagagggg aaaaatctga tctgcctcct ttagtttgga
721 agagacaatg ccattttctc ccttgagtaa tcttgtgaaa cagtccacag tttcatcatt
781 tgagtcaagt ggagaactaa cctttaccta ccaaagccac gttccacggc ccgaggctta
841 aacaggacca atgagaggcc acatccagct acgcaaagtt actggacatg cggtctgcag
901 tgcacattat aaggaatgga acatgaaaat agtatataat cctagacctg gagttgccaa
961 gttctgtcag actccatctc ccccaggttc aatgaaggat aataatctaa atcattaggg
1021 cagcagtttc tctggtaacg gaagagaccg tccgccagat ctgcaggctg tttctgctcc
1081 aacactgctt gcttgtgagc atctctgcct cagaatgggg ttttgggttg gagttcttgt
1141 tttcctctgt tctttcaagt tgtctccaac gaacagaaaa ctataaactt actggggaca
1201 ggatgtgtgc taaagggcac agcaagacac tgtcttttgc ttagctgacc aaaggggtca
1261 gcagggatgg cgtggagtca tgctgtggaa cttattctag gctgaatcct agggtaaggt
1321 ggatcaactg aactgtcact ccagagattt tagaaatttg agtaaagaaa caataaggac
1381 ctatacaatc atatgagaac aaaaatatga aatcttgcta gtgaagacgt attttttctt
1441 cttcccagca gccaggctag caccagttct ggcccagtct cctcttcttc tggagatcac
1501 atgtttttct tctaaggtta ggattgtgct ttgactgcga aaggaaacct cactgtttcc
1561 tccttccagg gactgagggt ctccaagcta gctgtggctt atgcagatgt tcactgggag
1621 gacctgccag aatctcggca cttgggggga gacctttact cccagtttgg tgaccatgct
1681 gtagtcagct ctatttccaa tcccgacagt agcagaatgg cattctacaa caaaaagaag
1741 ctagttatgg gagttaagtt tttgtagtta ctggtgttga tcctgaaagc agactgagat
1801 aacattaaat tgctgcaact gaagaactgc agccaagacc ttaattccag gaaagcacag
1861 aggacaaagt taattcaaaa agaggcgcta gatcaaggtc acagcactgc ctacacctgt
1921 ttacaaaaag aatcaaatac cactatgaat aaggattcag gggtttttaa tctactttcc
1981 ataaattacc aatatcactg attcaggaag atagtatctc agaatgacca gagcagcaca
2041 gaaacaagct actctgacat tatgggagct tcaaaattgt atcatgatac agaaacactc
2101 cttagcactt taagaaagtg agatggaact gccagatttc tggaaggaga aaaagtgtag
2161 gtatttgggt tcattaatct gctcacttga ggactttgtt ttgaaaaagt accttctgtg
2221 gacaaggtat tgtgctacca gctatacaac cctgacttca gagtttgcaa ccttgccctg
2281 agtgaatcat gttaaagctg tctgagtcta aagcaccgta tcttggtgca gaacagataa
2341 ttatagagag atggaatggg acaaccgcag ttttactaca ttctggtgtt tggcctatat
2401 gagaagccat cttctcacag attaagggct aagggcaaaa ggggtgggag gtgtggaact
2461 agccttaatg agtttcccat tcctgaacca aaattcaaag tgagtgagat gtaaatcctg
2521 tgattttggt gaagaaaaaa acgggtatct tcatagcagc ctaggaaacc ttaaccatat
2581 ctctaacacc acacagaaag aggctggagg agccactgga caaagcttct gtctctgtgt
2641 gtacatttat aatgttctaa ccaagtctca aaccttgatg aaaaacacaa aatttttcca
2701 taaacttatc agaagactca cttttctttc tttcttggat agagaaacca ttttctgaca
2761 ctaggtttac aatctcagtg tccttacaag ttaagtccta agctcacagg atcctccgag
2821 catgtccatc acct
//