LOCUS BC136331 2791 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens CAP-GLY domain containing linker protein family,
member 4, mRNA (cDNA clone MGC:167941 IMAGE:9020318), complete cds.
ACCESSION BC136331
VERSION BC136331.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2791)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2791)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: d Column: 12.
FEATURES Location/Qualifiers
source 1..2791
/db_xref="H-InvDB:HIT000500358"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167941 IMAGE:9020318"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_298"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CAGGCGAG"
gene 1..2791
/gene="CLIP4"
/db_xref="GeneID:79745"
/db_xref="HGNC:HGNC:26108"
CDS 26..2143
/gene="CLIP4"
/codon_start=1
/product="CAP-GLY domain containing linker protein family,
member 4"
/protein_id="AAI36332.1"
/db_xref="GeneID:79745"
/db_xref="HGNC:HGNC:26108"
/translation="MTIEDLPDFPLEGNPLFGRYPFIFSASDTPVIFSISAAPMPSDC
EFSFFDPNDASCQEILFDPKTSVSELFAILRQWVPQVQQNIDIIGNEILKRGCNVNDR
DGLTDMTLLHYTCKSGAHGIGDVETAVKFATQLIDLGADISLRSRWTNMNALHYAAYF
DVPELIRVILKTSKPKDVDATCSDFNFGTALHIAAYNLCAGAVKCLLEQGANPAFRND
KGQIPADVVPDPVDMPLEMADAAATAKEIKQMLLDAVPLSCNISKAMLPNYDHVTGKA
MLTSLGLKLGDRVVIAGQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYF
KCAPKYGIFAPLSKISKAKGRRKNITHTPSTKAAVPLIRSQKIDVAHVTSKVNTGLMT
SKKDSASESTLSLPPGEELKTVTEKDVALLGSVSSCSSTSSLEHRQSYPKKQNAISSN
KKTMSKSPSLSSRASAGLNSSATSTANNSRCEGELRLGERVLVVGQRLGTIRFFGTTN
FAPGYWYGIELEKPHGKNDGSVGGVQYFSCSPRYGIFAPPSRVQRVTDSLDTLSEISS
NKQNHSYPGFRRSFSTTSASSQKEINRRNAFSKSKAALRRSWSSTPTAGGIEGSVKLH
EGSQVLLTSSNEMGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNHG
VLVRPSRVTYRGINGSKLVDENC"
BASE COUNT 808 a 531 c 628 g 824 t
ORIGIN
1 gaggaggcag gtggctttct agaagatgac catagaggac cttccagatt ttccattaga
61 aggaaatcct ttgtttggaa gatacccatt tatattttct gcttctgata ccccagttat
121 cttttccatt tctgcagcac caatgccttc agactgtgaa ttttctttct ttgatcctaa
181 tgatgcatca tgccaggaaa ttctttttga tcccaaaact tcagtttcag aattatttgc
241 cattttgaga cagtgggttc ctcaggtcca acaaaacatt gacattattg gaaatgagat
301 tcttaagaga ggttgcaatg tgaatgatag agatggattg acagatatga ctcttttaca
361 ttatacctgc aaatctggag ctcatggtat tggtgatgtg gaaacagctg taaaatttgc
421 aactcagctt attgacctgg gagcagacat tagtttgcgg agtcgctgga caaacatgaa
481 tgctttgcat tatgctgctt attttgatgt ccctgaactt ataagagtga ttttgaaaac
541 gtcgaaacca aaagatgtgg atgccacttg cagtgatttt aattttggaa cagctttgca
601 tattgcagca tacaacttgt gtgcaggtgc tgtgaagtgc ctcttggagc agggagcaaa
661 tcctgcattt aggaatgaca aaggacagat ccctgctgat gttgttccag acccagtaga
721 tatgccgtta gagatggctg acgccgcagc cactgctaag gaaatcaagc agatgcttct
781 agatgcggtg cctctgtcat gtaacatctc aaaggccatg ctcccaaatt atgatcatgt
841 cactggcaag gcaatgctta cgtcacttgg cctgaagttg ggggatcgtg ttgttattgc
901 aggacagaag gttggtacat taagattttg tggaacaact gaatttgcaa gtgggcagtg
961 ggctggcatt gaactggatg aaccagaagg aaaaaataat ggaagtgttg gaaaagtcca
1021 gtactttaaa tgtgccccca agtatggtat ttttgcacct ctttcaaaga taagtaaagc
1081 aaaaggtcga aggaagaata taacacacac tccttctaca aaagctgctg tacctctcat
1141 caggtcccag aaaattgacg tagctcatgt gacgtcaaaa gtaaatactg gattaatgac
1201 atcaaaaaaa gatagtgctt ctgagtcaac actttcattg cctcctggtg aagaacttaa
1261 aactgtgaca gagaaagatg ttgccctgct tggatctgtc agcagctgct cctctacatc
1321 ttctttggaa cacagacaga gctaccccaa gaaacagaat gcaatcagca gtaacaagaa
1381 gacaatgagc aaaagccctt ccctttcatc cagagccagt gctggtttga attcctcagc
1441 aacatctaca gcaaataata gccgttgcga gggggaactc cgcctcggag agagagtgtt
1501 agtggtagga cagagactgg gcaccattag gttctttggg acaacaaact tcgctccagg
1561 atattggtat ggtatagagc ttgaaaaacc ccatggcaag aatgatggtt cagttggagg
1621 tgtgcagtat tttagctgtt ctccaagata tggaatattt gctcccccat ccagggtgca
1681 aagagtaaca gattccctgg ataccctttc agaaatttct tcaaataaac agaaccattc
1741 ttatcctggt tttaggagaa gttttagcac aacttctgct tcttcccaaa aggagattaa
1801 cagaagaaat gctttttcca aatcgaaagc tgctttgcgt cgcagttgga gcagcacccc
1861 caccgcaggt ggcattgaag ggagcgtgaa gctgcacgag gggtctcagg tcctgctcac
1921 gagctccaat gagatgggta ctgttaggta tgtgggcccc actgactttg cttcaggtat
1981 ctggcttgga cttgagctcc gaagcgccaa gggaaaaaat gatgggtcag tgggtgacaa
2041 gcgctatttc acctgtaagc cgaaccatgg agtcttagtt cgaccgagca gagtgaccta
2101 tcggggaatt aatgggtcaa aacttgtgga tgagaattgt taagcttcta aaatattaaa
2161 taagctcaaa tatatatatt tggtgtaaat aaagagtcca tggtaaatgg tttactttat
2221 ttagccatat taaaattttg aaaatatagt tatcttctta aaaaccatta taacaattca
2281 gagagagttc tttacaaagc catgaatatg aactatgggg aatcatggtt cttttaaagc
2341 aattttcaaa ataagtacca attaaagctt taggttccaa gaagattctg ggactcagga
2401 agaaaaagtg ccatcaggtg accagctgtt gcatttcttg cttattctgt tttgtttttg
2461 cacatcataa tggatttttc ttagtgccct aattgtgaag ggtttctcta gctttggtta
2521 tgtgtaatgt tcacgtgacc tttttttgtc aatcattttt ggaatttttc tttctttctg
2581 tgctttatta ctaataagtc caatgagtga gtagtagcta gatgactagt atgtagtttt
2641 atattttggt aaaattattt gccctttcag aaatgcctca tctaaagata catgataatt
2701 ttggagttgg aaggggcctt agaggctctc cagctctgct tcttgcccat tgccaaatac
2761 tgaaatggaa gcccgtctta cctggggtca c
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