LOCUS BC136308 2936 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens zinc finger protein, X-linked, mRNA (cDNA clone
MGC:167918 IMAGE:9020295), complete cds.
ACCESSION BC136308
VERSION BC136308.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2936)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2936)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: J Column: 20.
FEATURES Location/Qualifiers
source 1..2936
/db_xref="H-InvDB:HIT000500338"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167918 IMAGE:9020295"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCAAGGGA"
gene 1..2936
/gene="ZFX"
/db_xref="GeneID:7543"
/db_xref="HGNC:HGNC:12869"
/db_xref="MIM:314980"
CDS 179..2713
/gene="ZFX"
/codon_start=1
/product="ZFX protein"
/protein_id="AAI36309.1"
/db_xref="GeneID:7543"
/db_xref="HGNC:HGNC:12869"
/db_xref="MIM:314980"
/translation="MDEDGLELQQEPNSFFDATDRVSFCHPGWSTVAPSGSTATSASQ
AQVICSASRVTGATGADGTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVV
IQDVIEDVVIEDVQCPDIMEEADVSETVIIPEQVLDSDVTEEVSLAHCTVPDDVLASD
ITSASMSMPEHVLTGDSIHVSDVGHVGHVGHVEHVVHDSVVEAEIVTDPLTTDVVSEE
VLVADCASEAVIDANGIPVDQQDDDKGNCEDYLMISLDDAGKIEHDGSSGMTMDTESE
IDPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPR
EKMVYMTVNDSQPEDEDLNVAEIADEVYMEVIVGEEDAAAAAAAAAVHEQQMDDNEIK
TFMSIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQT
AIIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYRCTDCDYTTNKKI
SLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYE
TAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRS
ADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSS
NSSDLKRHIISVHTKDYPHKCDMCDKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIAD
PFVLSRHILSVHTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDA
SGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP"
BASE COUNT 901 a 580 c 697 g 758 t
ORIGIN
1 gcctgtcact gccgtctgtt ccctgagctg tgctttacgc tgggaaagac atagaagaac
61 tattaagaag atagaattgt tttgctgcgc agtacagcaa cagtggatgt tcaagattaa
121 gattagagtc aagttgtgtg attaagacag gagctgtgac tgatgagaat taaaggccat
181 ggatgaagat gggcttgaat tacaacaaga gccaaactca ttttttgatg caacagacag
241 ggtctcgttc tgtcacccag gctggagcac agtggcgcca tctgggtcca ctgcaacctc
301 cgcctcccag gctcaagtga tctgctcagc ttcccgagta actggggcta caggagctga
361 tggtacacac atggatggtg atcaaattgt tgtggaagta caagaaactg tttttgtttc
421 agatgttgtg gattcagaca taactgtgca taactttgtt cctgatgacc cagattcagt
481 tgtaatccaa gatgttattg aggacgttgt tatagaagat gttcagtgcc cagatatcat
541 ggaagaagca gatgtgtctg aaacggtcat cattcctgag caagtgctgg actcagatgt
601 aactgaagaa gtttctttag cacattgcac agtcccagat gatgttttag cttctgacat
661 tacttcagcc tcaatgtcta tgccagaaca cgtcttgacg ggtgattcta tacatgtgtc
721 tgacgttgga catgttggac atgttggaca tgttgaacat gtggttcatg atagtgtagt
781 ggaagcagaa attgtcactg atcctctgac taccgacgta gtttcagaag aagtattggt
841 agcagactgt gcctctgaag cagtcataga tgccaatggg atccctgtgg accagcagga
901 tgatgacaaa ggcaactgtg aggactacct tatgatttcc ttggatgatg ctggcaaaat
961 agaacacgat ggttcttctg gaatgaccat ggacacagag tcggaaattg atccttgtaa
1021 agtggatggc acttgccctg aggtcatcaa ggtgtacatt tttaaagctg accctggaga
1081 agatgactta ggtggaactg tagacattgt ggagagtgag cctgagaatg atcatggagt
1141 tgaactgctt gatcagaaca gcagtattcg tgttcccagg gaaaagatgg tttatatgac
1201 tgtcaatgac tctcagccag aagatgaaga tttaaatgtt gctgaaatcg ctgacgaagt
1261 ttatatggaa gtgatcgtag gagaggagga tgctgcagca gcagcggcag ccgccgccgt
1321 gcacgagcag caaatggatg acaatgaaat caaaaccttc atgtcgattg catgggcagc
1381 agcttatggt aataattctg atggaattga aaaccggaat ggcactgcaa gtgccctctt
1441 gcacatagat gagtctgctg gcctcggcag actggctaaa caaaaaccaa agaaaaggag
1501 aagacctgat tccaggcagt accaaacagc aataattatt ggccctgatg gacatccttt
1561 gactgtctat ccttgcatga tttgtgggaa gaagtttaag tcgagaggtt ttttgaaaag
1621 gcacatgaaa aaccatcccg aacaccttgc caagaagaaa taccgctgta ctgactgtga
1681 ttacactacc aacaagaaga taagtttaca caaccacctg gagagccaca agctgaccag
1741 caaggcagag aaggccattg aatgcgatga gtgtgggaag catttctctc atgcaggggc
1801 tttgtttact cacaaaatgg tgcataagga aaaaggagcc aacaaaatgc acaagtgtaa
1861 attctgtgaa tacgagacag ctgaacaagg gttattgaat cgccacctct tggcagtcca
1921 cagcaagaac tttcctcata tttgtgtgga gtgtggtaag ggttttcgtc acccgtcaga
1981 gctcaaaaag cacatgagaa tccatactgg ggagaagccg taccaatgcc agtactgcga
2041 atataggtct gcagactctt ctaacttgaa aacgcatgtc aaaactaagc atagtaaaga
2101 gatgccattc aagtgtgaca tttgtcttct gactttctcg gataccaaag aggtgcagca
2161 acatgctctt atccaccaag aaagcaaaac acaccagtgt ttgcattgcg accacaagag
2221 ttcgaactca agtgatttga aacgacacat aatttcagtt cacacgaaag actaccccca
2281 taagtgtgac atgtgtgata aaggctttca caggccttca gaactcaaga aacacgtggc
2341 tgcccacaag ggcaaaaaaa tgcaccagtg tagacattgt gactttaaga ttgcagatcc
2401 atttgttcta agtcgccata ttctctcagt tcacacaaag gatcttccat ttaggtgcaa
2461 gagatgtaga aagggattta ggcaacagag tgagcttaaa aagcatatga agacacacag
2521 tggcaggaaa gtgtatcagt gtgagtactg tgagtatagc actacagatg cctcaggctt
2581 taaacggcac gttatttcca ttcacacgaa agactatcct caccggtgtg agtactgcaa
2641 gaaaggcttc cgaagacctt cagaaaagaa ccagcacata atgcgacatc ataaagaagt
2701 tggcctgccc taacaatact tctacagaac gtttgtagag atattggcct tgaagcagaa
2761 aattcatttt aaagccaatc agtctcattc acatacaata ctgtatattg atttatgctg
2821 tgtacaaata gaattattac ttctagttga ctttttttta aatatacatt ttgctcagta
2881 gtgtgttctg aattctattc agtttgttta ataaataggg aaaactggca acatgc
//