LOCUS BC136305 3580 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens forkhead box J2, mRNA (cDNA clone MGC:167915
IMAGE:9020292), complete cds.
ACCESSION BC136305
VERSION BC136305.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3580)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3580)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: c Column: 10.
FEATURES Location/Qualifiers
source 1..3580
/db_xref="H-InvDB:HIT000500336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167915 IMAGE:9020292"
/tissue_type="Lung, PCR rescued clones"
/clone_lib="NIH_MGC_298"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: ACCGTTGC"
gene 1..3580
/gene="FOXJ2"
/gene_synonym="FHX"
/db_xref="GeneID:55810"
/db_xref="HGNC:HGNC:24818"
CDS 56..1780
/gene="FOXJ2"
/gene_synonym="FHX"
/codon_start=1
/product="forkhead box J2"
/protein_id="AAI36306.1"
/db_xref="GeneID:55810"
/db_xref="HGNC:HGNC:24818"
/translation="MASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGSSRKCSP
GSPTDPNATLSKDEAAVHQDGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPY
YKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYWTIDTCPDISRKRRHPPDDDL
SQDSPEQEASKSPRGGVAGSGEASLPPEGNPQMSLQSPTSIASYSQGTGSVDGGAVAA
GASGRESAEGPPPLYNTNHDFKFSYSEINFQDLSWSFRNLYKSMLEKSSSSSQHGFSS
LLGDIPPSNNYYMYQQQQPPPPQQQQQQQQPPQPPPQQSQPQQQQAPAQGPSAVGGAP
PLHTPSTDGCTPPGGKQAGAEGYGPPPVMAMHPPPLQHGGYHPHQHHPHSHPAQQPPP
PQPQAQGQAPINNTGFAFPSDWCSNIDSLKESFKMVNRLNWSSIEQSQFSELMESLRQ
AEQKNWTLDQHHIANLCDSLNHFLTQTGHVPPQGGTHRPPAPARIADSCALTSGKQES
AMSQVNSYGHPQAPHLYPGPSPMYPIPTQDSAGYNRPAHHMVPRPSVPPPGANEEIPD
DFDWDLIT"
BASE COUNT 900 a 957 c 796 g 927 t
ORIGIN
1 caggtggttc cctccctttg ccggaggaac cttggagaca gaacccagaa gtaccatggc
61 ttctgaccta gagagtagcc tcacctccat agactggctc ccccagctga ccctccgagc
121 taccattgag aagcttggaa gtgcctccca ggctgggcct cccgggagca gccgcaagtg
181 ttcaccaggg tcacccacag atcctaatgc caccctgagc aaagacgagg cagcagtgca
241 ccaggacggc aagccacgat acagctatgc cactctcatc acctatgcca tcaactcctc
301 tccagccaag aagatgaccc tcagcgagat ttaccgctgg atctgtgata acttccccta
361 ttacaagaat gctggcattg gttggaagaa ttcaatacgg cacaaccttt ctctcaacaa
421 gtgtttccgg aaggtgccca gacctcggga tgaccctggg aagggttcct attggacaat
481 tgacacctgc cctgacattt cccgaaagag aagacaccct ccagatgatg atctgtccca
541 agactcacca gaacaggagg caagcaagag cccacgggga ggcgttgcag ggagtggaga
601 agcctcactg cctcctgagg ggaatccgca gatgtcactt cagagcccca catctatagc
661 cagctacagc cagggcacag gatctgtgga tggtggagca gtggcagcag gggcttcagg
721 ccgagaaagt gctgagggtc cccctcccct ctataacacc aaccatgact ttaaattctc
781 ctactcagag atcaactttc aggatctaag ctggtccttc cgcaacctct ataagtccat
841 gctggagaag tcctcttcct cctctcagca cggcttttct tctctcctgg gggacatccc
901 accctcgaac aactactaca tgtatcagca gcagcagcca ccgccacctc aacagcagca
961 gcagcagcag cagccgccac agccacctcc ccagcagtcc cagccacagc agcagcaggc
1021 acctgcccag ggcccctcag ctgtaggggg tgctcctcca ctgcacaccc caagcacaga
1081 tggttgtacc ccaccagggg gaaagcaagc tggggcggaa ggctatgggc ctccccctgt
1141 aatggccatg catccacccc cgctgcagca tggaggctac caccctcatc agcaccatcc
1201 ccactcccac cctgcccagc agccaccacc tccacagcca caggcacaag gccaggctcc
1261 catcaacaac actggctttg cctttccttc tgactggtgc tctaatattg actctttaaa
1321 ggaaagcttc aagatggtga atcggctcaa ttggtccagc attgagcagt cacaattctc
1381 agaactgatg gagagtctac gacaggcaga gcagaagaac tggaccctcg accagcatca
1441 cattgccaat ctgtgtgact ccctcaacca cttccttact cagactggtc acgtgccccc
1501 tcaagggggt acccaccgcc caccagcccc tgcccgtatt gctgactcct gtgccctcac
1561 cagtggcaaa caggagtcag ccatgagcca agtgaactct tatgggcacc cacaagctcc
1621 ccacctctac cctggcccat caccaatgta cccaatcccc acccaggact cagcaggata
1681 caatcgccca gcacaccata tggtccctcg gccatcagtg ccacctcctg gtgccaatga
1741 ggagatccct gatgacttcg actgggactt gatcacttag tgcatcacag agtgtggaca
1801 tcagcccagg gccgcgtggt gaaatctggc agtggggaaa gagcaacccc agcccgtccc
1861 ttccccccgt ctgtatatag acatatatcc tctttttgtt ctttctctgt cagagaagcc
1921 actgcaagat gctgccgaag ataaccctct ctttcctgcc tcattcttct ctcttccttc
1981 ctgttttttc ctagttcttt tattattatt cttatattat tattattatt attggttata
2041 tactgtccat agtctcctgt ccctacatca tggatcatgt ccaccttttg ctaatttaaa
2101 atcatcaggc tggaagatga agccatgata gctacagaga aaggttttag actccagttt
2161 acctttctct tggagaaact caatgctaat cccacctttt ggccctaaat tgttttttgt
2221 tcccatcagt ttcaggccag gactggagag gccacattac caagtagaaa gggtctgaaa
2281 cattacttgg cagccaagaa tttggaggtt ttaaaatggt gctaattctg tcctctgagg
2341 tcttccttgt ccctttatac cttcaatcct tacttctgcc agtctgtatt tcctatcaag
2401 ggtgaaagtg atgatggtgg tgcaggaggg tgacaataaa atcctagtgg aattggagac
2461 cattggaagg gatggaatat aagtcagtgt gaaactgagt gtacactgcc atgttacatc
2521 agtgtccatt ggcttgtttt gagcctgttc tctaagaaga taggattggt tttagcccaa
2581 actctgcttc tatggtaggg catgaggaca actattcagc atggttttag cttcttggag
2641 atgattccaa cttaactatt ttggcttttt aaacataatt ttctctgaaa attaattgtg
2701 gctcttattt gcatttacga atgatcttcc catccctttt tcccattcag caaatattag
2761 tttgtcctcc tttaattgtt tgcccaaatc ttccacccat cttttttctt ccctcatttt
2821 ctgggattct caagaaagaa aaagtaaccc attatcactc tgagtttcgt cgtgccctga
2881 gacatgatgg gaatctcatt cccacctctc atagcagagc caaaccttta gtgttggtgg
2941 taggaggatg gggagaggaa aaaagagctg gcaaagaaat ggatagggaa tattttagtt
3001 ctttaaatat ataggcagat gcttctcttg gaatccagat catctggctg aagcttttgc
3061 aagtaggctt tgaggggtga aggagattgg tggaggagag taaataatct agaggcaaga
3121 gttcagtgag ggccaagggg gacccccaga aaaaggtatg gagctaactc atctctttta
3181 caaggggtgg ccatgactta ctgttgcaaa gtactcagtg tatatttaat gttgattgtt
3241 gaattttagt tacgagaggg aagaacaatt ttacttctgt ccttatttca cttgctgaaa
3301 agctgtggga caaaatgtat ggaatagaca aggccacttt ctttgtgatt tctgcttttc
3361 atgcatatta ttttatttac ccataatttc caagaggttt ggcgttccgc tctcctgctt
3421 ttttctttca tccacccctt tccttttttt ggaagggggt tatatatgag agttcattga
3481 agaagtccag tgaggctgaa gtaaaggggc aagatagggc agttaactaa agagcacttt
3541 atttctttga agcctttcta agaaagaaat gggggtgcga
//