LOCUS BC136299 2978 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens cytochrome P450, family 4, subfamily F, polypeptide 3,
mRNA (cDNA clone MGC:167909 IMAGE:9020286), complete cds.
ACCESSION BC136299
VERSION BC136299.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2978)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2978)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: c Column: 4
single stranded.
FEATURES Location/Qualifiers
source 1..2978
/db_xref="H-InvDB:HIT000500330"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167909 IMAGE:9020286"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AATCCCCC"
gene 1..2978
/gene="CYP4F3"
/gene_synonym="CPF3"
/gene_synonym="CYP4F"
/db_xref="GeneID:4051"
/db_xref="HGNC:HGNC:2646"
/db_xref="MIM:601270"
CDS 43..1605
/gene="CYP4F3"
/gene_synonym="CPF3"
/gene_synonym="CYP4F"
/codon_start=1
/product="CYP4F3 protein"
/protein_id="AAI36300.1"
/db_xref="GeneID:4051"
/db_xref="HGNC:HGNC:2646"
/db_xref="MIM:601270"
/translation="MPQLSLSSLGLWPMAASPWLLLLLVGASWLLARILAWTYTFYDN
CCRLRCFPQPPKRNWFLGHLGLVTPTEQGMRVLTQLVATYPQGFKVWMGPIFPVIRFC
HPNIIRSVINASAAIVPKDKVFYSFLKPWLGDGLLLSAGEKWSRHRRMLTPAFHFNIL
KPYMKIFNESVNIMHAKWQLLASEGSARLDMFEHISLMTLDSLQKCVFSFDSHCQEKP
SEYIAAILELSALVTKRHQQILLYIDFLYYLTPDGQRFRRACRLVHDFTDAVIQERRR
TLPSQGVDDFLQAKAKSKTLDFIDVLLLSKDEDGKKLSDEDIRAEADTFMFEGHDTTA
SGLSWVLYHLAKHPEYQERCRQEVQELLKDREPKEIEWDDLAQLPFLTMCIKESLRLH
PPVPAVSRCCTQDIVLPDGRVIPKGIICLISVFGTHHNPAVWPDPEVYDPFRFDPKNI
KERSPLAFIPFSAGPRNCIGQAFAMAEMKVVLGLTLLRFRVLPDHTEPRRKPELVLRA
EGGLWLRVEPLS"
BASE COUNT 740 a 742 c 729 g 767 t
ORIGIN
1 gggagaggag gttgtgtggg acaaggtgct cctgacagaa ggatgccaca gctgagcctg
61 tcctcgctgg gcctttggcc aatggcagca tccccgtggc tgctcctgct gctggttggg
121 gcctcctggc tcctggcccg catcctggcc tggacctata ccttctatga caactgctgc
181 cgcctccggt gtttcccgca acccccgaaa cggaattggt tcttgggtca cctgggcctg
241 gtcaccccca cggagcaggg catgagggtc ctgactcagc tggtggccac ctacccccag
301 ggctttaagg tctggatggg ccccatcttc cccgtcatcc gtttttgcca ccccaacatc
361 atccggtctg tcatcaacgc ctcagctgcc attgtaccaa aggacaaggt cttctacagc
421 ttcctgaagc cctggctggg ggatgggctc ctgctgagtg ctggtgaaaa gtggagccgc
481 caccgtcgga tgctgacgcc tgccttccat ttcaacatcc tgaagcccta tatgaagatt
541 ttcaatgaga gtgtgaacat catgcatgcc aagtggcagc tcctggcctc agagggtagt
601 gcccgtctgg acatgtttga gcacatcagc ctcatgacct tggacagtct gcagaaatgt
661 gtcttcagct ttgacagcca ttgccaggag aagcccagtg aatatattgc cgccatcttg
721 gagctcagtg cccttgtgac aaaaagacac cagcagatcc tcctgtacat agacttcctg
781 tattatctca cccctgatgg gcagcgtttc cgcagggcct gccgcctggt gcacgacttc
841 acagatgccg tcatccagga gcggcgccgc accctcccta gccagggtgt tgatgacttc
901 ctccaagcca aggccaaatc caagactttg gacttcattg atgtactcct gctgagcaag
961 gatgaagatg ggaagaagtt gtccgatgag gacataagag cagaagctga cacctttatg
1021 tttgagggcc atgacaccac agccagtggt ctctcctggg tcctgtacca ccttgcaaag
1081 cacccggaat accaggagcg ctgtcggcag gaggtgcaag agcttctgaa ggaccgtgag
1141 cctaaagaga ttgaatggga cgacctggcc cagctgccct tcctgaccat gtgcattaag
1201 gagagcctga ggctgcatcc cccagtccct gccgtctctc gctgctgcac ccaagacatt
1261 gtgctcccag acggccgggt catccccaaa ggcattatct gcctcatcag tgtttttgga
1321 acccatcaca acccagccgt gtggccggac cctgaggtct atgacccctt tcgctttgac
1381 ccaaagaaca tcaaggagag gtcacctctg gcttttattc ccttctcagc agggcccagg
1441 aactgcatcg ggcaggcgtt cgcgatggcg gagatgaagg tggtcctggg gctcacgctg
1501 ctgcgcttcc gcgtcctgcc tgaccacacc gagccccgca ggaagccgga gctggtcctg
1561 cgcgcagagg gcggactttg gctgcgggtg gagcccctga gctgagttct gcagagaccc
1621 actctgaccc cactaaaatg acccctgatt catcaaaagt gaggcctaga attaccctaa
1681 gaccctgttc cacagtcctg tattccatcc tagatatcta ctcaaaataa ttgagacaag
1741 tgttcaaaca gaaagacgct tgtgcgtgaa tgttcatggc agccctattc acagtagcca
1801 aacgatgaaa acaaccccaa gctatatatt accagatgaa aggataaaca aaatatggtc
1861 catccataca atggagtatt acacagccat aaaaaggaat gaagcagtga tccccactac
1921 actgtggatg aaccttgaat gcatgatact gaatgaaaga catcagatgc aaaaggtcac
1981 atagtgtact gtccttttat atgaaatttc cagaacaggc caatctgaag agatgtatag
2041 tggattggtg gctttcagca gctgtgggga ggtgggactg aggagcgact gctaatcagg
2101 atggggtttc ctcctgggat ggtgaaaatg ttccggacct agatagtgat gaaggtagca
2161 cgacactgtg agtgcactaa atgctattga attggacact ttagaatggt tgaaatagtg
2221 atttttatgt gaattctacc taaacatgct attacagctc atatatactt tttccatctg
2281 gattcttcac aaaagaatat gttgtgagca tctttccatg atattaaatc atcttaggaa
2341 acattatttt gtgttcttca aaatgtgcat gttaagtatt caaatcagtc ttaaattttt
2401 aaaaatatgt aattttagaa aataatttaa aaggttttgt ttcagtttgt aagatttctt
2461 ttctggcact ttaatggctt gaggtatcat tatcagttac aaattgagtt attcttcatc
2521 aaatgacttt tggagtagag attttatttt tatagcaata gatgcacaga tattcctgta
2581 agatacaggt gtggttagac acttttctag aacaggcatg ccctgcaaac tccacagaca
2641 ctgactgttt ttgtcctatt aagaagtaga ccactgagaa gggagaaggt gacattttag
2701 ctttcccagg taaaagtggt tttcatcctc acaccaattt tatggactgg acgttaactc
2761 tcttgctcaa ggtcactctg agtggaagag tggggataaa tctggttcgt ttggcatcag
2821 aggccatgac ttttcctacc acagaagtaa ttttcaaagt aagtctctgc cctaggcaca
2881 tcagatcacc tggggaccac tccagagtga gtagacaaga ctttgacagg ggtgcctaat
2941 tttttttttt ttttgagatg gagtctcgct ctgttgcc
//