LOCUS BC136291 1851 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens ubiquitin specific peptidase 21, mRNA (cDNA clone
MGC:167901 IMAGE:9020278), complete cds.
ACCESSION BC136291
VERSION BC136291.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1851)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1851)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: b Column: 20
single stranded.
FEATURES Location/Qualifiers
source 1..1851
/db_xref="H-InvDB:HIT000500322"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167901 IMAGE:9020278"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ATCATCCG"
gene 1..1851
/gene="USP21"
/gene_synonym="USP16"
/db_xref="GeneID:27005"
/db_xref="HGNC:HGNC:12620"
/db_xref="MIM:604729"
CDS 25..1722
/gene="USP21"
/gene_synonym="USP16"
/codon_start=1
/product="ubiquitin specific peptidase 21"
/protein_id="AAI36292.1"
/db_xref="GeneID:27005"
/db_xref="HGNC:HGNC:12620"
/db_xref="MIM:604729"
/translation="MPQASEHRLGRTREPPVNIQPRVGSKLPFAPRARSKERRNPASG
PNPMLRPLPPRPGLPDERLKKLELGRGRTSGPRPRGPLRADHGVPLPGSPPPTVALPL
PSRTNLARSKSVSSGDLRPMGIALGGHRGTGELGAALSRLALRPEPPTLRRSTSLRRL
GGFPGPPTLFSIRTEPPASHGSFHMISARSSEPFYSDDKMAHHTLLLGSGHVGLRNLG
NTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHPDSCE
AVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEINRRGRRAPPILANGPVP
SPPRRGGALLEEPELSDDDRANLMWKRYLEREDSKIVDLFVGQLKSCLKCQACGYRST
TFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEELESENAPVCDRCRQKTRSTKKL
TVQRFPRILVLHLNRFSASRGSIKKSSVGVDFPLQRLSLGDFASDKAGSPVYQLYALC
NHSGSVHYGHYTALCRCQTGWHVYNDSRVSPVSENQVASSEGYVLFYQLMQEPPRCL"
BASE COUNT 380 a 570 c 491 g 410 t
ORIGIN
1 caggtccagc ctgtggtgtc cacaatgccc caggcctctg agcaccgcct gggccgtacc
61 cgagagccac ctgttaatat ccagccccga gtgggatcca agctaccatt tgcccccagg
121 gcccgcagca aggagcgcag aaacccagcc tctgggccaa accccatgtt acgacctctg
181 cctccccggc caggtctgcc tgatgaacgg ctcaagaaac tggagctggg acggggacgg
241 acctcaggcc ctcgtcccag aggccccctt cgagcagatc atggggttcc cctgcctggc
301 tcaccacccc caacagtggc tttgcctctc ccatctcgga ccaacttagc ccgttccaag
361 tctgtgagca gtggggactt gcgtccaatg gggattgcct tgggagggca ccgtggcacc
421 ggagagcttg gggctgcact gagccgcttg gccctccggc ctgagccacc cactttgaga
481 cgtagcactt ctctccgccg cctagggggc tttcctggac cccctaccct gttcagcata
541 cggacagagc cccctgcttc ccatggctcc ttccacatga tatccgcccg gtcctctgag
601 cctttctact ctgatgacaa gatggctcat cacacactcc ttctgggctc tggtcatgtt
661 ggccttcgaa acctgggaaa cacgtgcttc ctgaatgctg tgctgcagtg tctgagcagc
721 actcgacctc ttcgggactt ctgtctgaga agggacttcc ggcaagaggt gcctggagga
781 ggccgagccc aagagctcac tgaagccttt gcagatgtga ttggtgccct ctggcaccct
841 gactcctgcg aagctgtgaa tcctactcga ttccgagctg tcttccagaa atatgttccc
901 tccttctctg gatacagcca gcaggatgcc caagagttcc tgaagctcct catggagcgg
961 ctacaccttg aaatcaaccg ccgaggccgc cgggctccac cgatacttgc caatggtcca
1021 gttccctctc caccccgccg aggaggggct ctgctagaag aacctgagtt aagtgatgat
1081 gaccgagcca acctaatgtg gaaacgttac ctggagcgag aggacagcaa gattgtggac
1141 ctgtttgtgg gccagttgaa aagttgtctc aagtgccagg cctgtgggta tcgctccacg
1201 accttcgagg ttttttgtga cctgtccctg cccatcccca agaaaggatt tgctgggggc
1261 aaggtgtctc tgcgggattg tttcaacctt ttcactaagg aagaagagct agagtcggag
1321 aatgccccag tgtgtgaccg atgtcggcag aaaactcgaa gtaccaaaaa gttgacagta
1381 caaagattcc ctcgaatcct cgtgctccat ctgaatcgat tttctgcctc ccgaggctcc
1441 atcaaaaaaa gttcagtagg tgtagacttt ccactgcagc gactgagcct aggggacttt
1501 gccagtgaca aagccggaag tcctgtatac cagctgtatg ccctttgcaa ccactcaggc
1561 agcgtccact atggccacta cacagccctg tgccggtgcc agactggttg gcatgtctac
1621 aatgactctc gtgtctcccc tgtcagtgaa aaccaggtgg catccagcga gggctacgtg
1681 ctgttctacc aactgatgca ggagccaccc cggtgcctgt gacacctcta agctctggca
1741 cctgtgaagc cctttaaaca cccttaagcc ccaggctccc cgtttacctc agagacgtct
1801 atttttgtgt ctttttaatc ggggaggggg gagggggtgg ttgtagctcc a
//