LOCUS BC136279 3244 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens elastin microfibril interfacer 1, mRNA (cDNA clone
MGC:167889 IMAGE:9020266), complete cds.
ACCESSION BC136279
VERSION BC136279.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3244)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3244)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: b Column: 8
single stranded.
FEATURES Location/Qualifiers
source 1..3244
/db_xref="H-InvDB:HIT000500311"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167889 IMAGE:9020266"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCGATGAT"
gene 1..3244
/gene="EMILIN1"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/db_xref="GeneID:11117"
/db_xref="HGNC:HGNC:19880"
/db_xref="MIM:130660"
CDS 100..3150
/gene="EMILIN1"
/gene_synonym="EMILIN"
/gene_synonym="EMILIN-1"
/gene_synonym="gp115"
/codon_start=1
/product="elastin microfibril interfacer 1"
/protein_id="AAI36280.1"
/db_xref="GeneID:11117"
/db_xref="HGNC:HGNC:19880"
/db_xref="MIM:130660"
/translation="MAPRTLWSCYLCCLLTAAAGAASYPPRGFSLYTGSSGALSPGGP
QAQIAPRPASRHRNWCAYVVTRTVSCVLEDGVETYVKYQPCAWGQPQCPQSIMYRRFL
RPRYRVAYKTVTDMEWRCCQGYGGDDCAESPAPALGPASSTPRPLARPARPNLSGSSA
GSPLSGLGGEGPGESEKVQQLEEQVQSLTKELQGLRGVLQGLSGRLAEDVQRAVETAF
NGRQQPADAAARPGVHETLNEIQHQLQLLDTRVSTHDQELGHLNNHHGGSSSSGGSRA
PAPASAPPGPSEELLRQLEQRLQESCSVCLAGLDGFRRQQQEDRERLRAMEKLLASVE
ERQRHLAGLAVGRRPPQECCSPELGRRLAELERRLDVVAGSVTVLSGRRGTELGGAAG
QGGHPPGYTSLASRLSRLEDRFNSTLGPSEEQEESWPGAPGGLSHWLPAARGRLEQLG
GLLANVSGELGGRLDLLEEQVAGAMQACGQLCSGAPGEQDSQVSEILSALERRVLDSE
GQLRLVGSGLHTVEAAGEARQATLEGLQEVVGRLQDRVDAQDETAAEFTLRLNLTAAR
LGQLEGLLQAHGDEGCGACGGVQEELGRLRDGVERCSCPLLPPRGPGAGPGVGGPSRG
PLDGFSVFGGSSGSALQALQGELSEVILSFSSLNDSLNELQTTVEGQGADLADLGATK
DRIISEINRLQQEATEHATESEERFRGLEEGQAQAGQCPSLEGRLGRLEGVCERLDTV
AGGLQGLREGLSRHVAGLWAGLRETNTTSQMQAALLEKLVGGQAGLGRRLGALNSSLQ
LLEDRLHQLSLKDLTGPAGEAGPPGPPGLQGPPGPAGPPGSPGKDGQEGPIGPPGPQG
EQGVEGAPAAPVPQVAFSAALSLPRSEPGTVPFDRVLLNDGGYYDPETGVFTAPLAGR
YLLSAVLTGHRHEKVEAVLSRSNQGVARVDSGGYEPEGLENKPVAESQPSPGTLGVFS
LILPLQAGDTVCVDLVMGQLAHSEEPLTIFSGALLYGDPELEHA"
BASE COUNT 546 a 997 c 1191 g 510 t
ORIGIN
1 ctcgggctgt cctgtggagc agcagcatcc ccggggccgg cagaggcgcc agtggctggg
61 cgggatgagt ctctgagggc cactgtggag cgccccgcca tggccccccg caccctctgg
121 agctgctacc tctgctgcct gctgacggca gctgcagggg ccgccagcta ccctcctcga
181 ggtttcagcc tctacacagg ttccagtggg gccctcagcc ccggggggcc ccaggcccag
241 attgcccccc ggccagccag ccgccacagg aactggtgtg cctacgtggt gacccggaca
301 gtgagctgtg tccttgagga tggagtggag acatatgtca agtaccagcc ttgtgcctgg
361 ggccagcccc agtgtcccca aagcatcatg taccgccgct tcctccgccc tcgctaccgt
421 gtggcctaca agacagtgac cgacatggag tggaggtgct gtcagggtta tgggggcgat
481 gactgtgctg agagtcccgc tccagcgctg gggcctgcgt cttccacacc acggcccctg
541 gcccggcctg cccgccccaa cctctctggc tccagtgcag gcagccccct cagtggactg
601 gggggagaag gtcctgggga gtcagagaag gtgcagcagc tggaggaaca ggtgcagagc
661 ctgaccaagg agctgcaagg cctgcggggc gtcctgcaag gactgagcgg gcgcctggca
721 gaggatgtgc agagggctgt ggagacggcc ttcaacggga ggcagcagcc agctgacgcg
781 gctgcccgcc ctggggtgca tgaaaccctc aatgagatcc agcaccagct gcagctcctg
841 gacacccgcg tctccaccca cgaccaggag ctgggtcacc tcaacaacca tcatggcggc
901 agcagcagca gtgggggcag cagggcccca gccccagcct cagcccctcc gggccccagt
961 gaggagctgc tgcggcagct ggagcagcgg ttgcaggagt cctgctccgt gtgcctggcc
1021 gggctagatg gcttccgccg gcagcagcag gaggacaggg agcggctgcg agcgatggag
1081 aagctgctgg cctcggtgga ggagcggcaa cggcacctcg cagggctggc ggtgggccgc
1141 aggccccctc aggaatgctg ctctccagag ctgggccggc gactggcaga gctggagcgc
1201 aggctggatg tcgtggccgg ctcagtgaca gtgctgagtg ggcggcgagg cacagagctg
1261 ggaggagccg cggggcaggg aggccacccc ccaggctaca ccagcttggc ctcccgcctg
1321 tctcgcctgg aggaccgctt caactccacc ctgggccctt cggaggagca ggaggagagc
1381 tggcctgggg ctcctggggg gctgagccac tggctgcctg ctgcccgggg ccgactagag
1441 cagttggggg ggctgctggc caatgtgagc ggggagctgg gggggcggtt ggatctgttg
1501 gaggagcagg tggcaggggc catgcaggca tgcgggcagc tctgctctgg ggcccctggg
1561 gagcaggact ctcaagtcag cgagatcctc agtgccttgg agcgcagggt gctggacagt
1621 gaggggcagc tgcggctggt gggctccggc ctgcacacgg tggaagcagc gggggaggcc
1681 cggcaggcca cgctggaggg attacaagag gttgtgggcc ggctccagga tcgtgtggat
1741 gcccaggatg agacagctgc agagttcaca ctacggctga atctcactgc ggcccggcta
1801 ggccaactgg aggggctgct gcaggcccat ggggatgagg gctgtggggc ctgtggcgga
1861 gtccaagagg aactaggccg ccttcgggat ggtgtggagc gctgctcctg ccccctgttg
1921 cctcctcggg gtcctggggc tggtccaggt gttgggggcc caagccgtgg gcccctggac
1981 ggcttcagcg tgtttggggg cagctcaggc tcagccctgc aggccctgca aggagagctc
2041 tctgaggtta ttctcagctt cagctccctc aatgactcac tgaatgagct ccagaccact
2101 gtggagggcc agggcgctga tctggctgac ctgggggcaa ccaaggaccg tatcatttct
2161 gagattaaca ggctgcagca ggaggccaca gagcatgcta cagagagtga agagcgcttc
2221 cgaggcctag aggagggaca agcacaggcc ggccagtgcc ccagcttaga ggggcgattg
2281 ggccgtcttg agggtgtctg tgaacggttg gacactgtgg ctgggggact gcagggcctg
2341 cgcgagggcc tttccagaca cgtggctggg ctctgggctg ggctccggga aaccaacacc
2401 accagccaga tgcaggcagc cctgctggag aagctggtcg ggggacaggc gggcctgggc
2461 aggcggctgg gtgcccttaa cagctccctg cagctcctgg aggaccgtct gcaccagctc
2521 agcctgaagg acctcactgg gcctgcagga gaggctgggc ccccagggcc tcctgggctg
2581 cagggacccc caggccctgc tggacctcca ggatcaccag gcaaggacgg gcaagagggc
2641 cccatcgggc caccaggtcc tcaaggtgaa cagggagtgg agggggcacc agcagcccct
2701 gtgccccaag tggcattttc agctgctctg agtttgcccc ggtctgaacc aggcacggtc
2761 cccttcgaca gagtcctgct caatgatgga ggctattatg atccagagac aggcgtgttc
2821 acagcgccac tggctggacg ctacttgctg agcgcggtgc tgactgggca ccggcacgag
2881 aaagtggagg ccgtgctgtc ccgctccaac cagggcgtgg cccgcgtaga ctccggtggc
2941 tacgagcctg agggcctgga gaataagccg gtggccgaga gccagcccag cccgggcacc
3001 ttgggcgtct tcagcctcat cctgccgctg caggccgggg acacggtctg cgtcgacctg
3061 gtcatggggc agctggcgca ctcggaggag ccgctcacca tcttcagcgg ggccctgctc
3121 tatggggacc cagagcttga acacgcgtag actggggtcc cgcccgacgt gtctacgtcg
3181 gctgaagaga cagcgggggc ggcgggctcc tggggtctcg cctgagacgg ggcacctagc
3241 cctg
//