LOCUS BC136269 3536 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens solute carrier family 4, sodium bicarbonate
transporter, member 10, mRNA (cDNA clone MGC:167879 IMAGE:9020256),
complete cds.
ACCESSION BC136269
VERSION BC136269.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3536)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3536)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 670 Row: a Column: 22
single stranded.
FEATURES Location/Qualifiers
source 1..3536
/db_xref="H-InvDB:HIT000500301"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167879 IMAGE:9020256"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GAAGACAA"
gene 1..3536
/gene="SLC4A10"
/gene_synonym="NBCn2"
/gene_synonym="NCBE"
/db_xref="GeneID:57282"
/db_xref="HGNC:HGNC:13811"
/db_xref="MIM:605556"
CDS 71..3337
/gene="SLC4A10"
/gene_synonym="NBCn2"
/gene_synonym="NCBE"
/codon_start=1
/product="solute carrier family 4, sodium bicarbonate
transporter, member 10"
/protein_id="AAI36270.1"
/db_xref="GeneID:57282"
/db_xref="HGNC:HGNC:13811"
/db_xref="MIM:605556"
/translation="MEIKDQGAQMEPLLPTRNDEEAVVDRGGTRSILKTHFEKEDLEG
HRTLFIGVHVPLGGRKSHRRHRHRGHKHRKRDRERDSGLEDGRESPSFDTPSQRVQFI
LGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARWLKFEEDVEDGGERWSKPYVA
TLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQQVSSGQLNEDVRHRVHEALM
KQHHHQNQKKLTNRIPIVRSFADIGKKQSEPNSMDKNAGQVVSPQSAPACVENKNDVS
RENSTVDFSKVDLHFMKKIPPGAEASNILVGELEFLDRTVVAFVRLSPAVLLQGLAEV
PIPTRFLFILLGPLGKGQQYHEIGRSIATLMTDEVFHDVAYKAKDRNDLVSGIDEFLD
QVTVLPPGEWDPSIRIEPPKNVPSQEKRKIPAVPNGTAAHGEAEPHGGHSGPELQRTG
RIFGGLILDIKRKAPYFWSDFRDAFSLQCLASFLFLYCACMSPVITFGGLLGEATEGR
ISAIESLFGASMTGIAYSLFGGQPLTILGSTGPVLVFEKILFKFCKEYGLSYLSLRAS
IGLWTATLCIILVATDASSLVCYITRFTEEAFASLICIIFIYEALEKLFELSEAYPIN
MHNDLELLTQYSCNCVEPHNPSNGTLKEWRESNISASDIIWENLTVSECKSLHGEYVG
RACGHDHPYVPDVLFWSVILFFSTVTLSATLKQFKTSRYFPTKVRSIVSDFAVFLTIL
CMVLIDYAIGIPSPKLQVPSVFKPTRDDRGWFVTPLGPNPWWTVIAAIIPALLCTILI
FMDQQITAVIINRKEHKLKKGCGYHLDLLMVAVMLGVCSIMGLPWFVAATVLSITHVN
SLKLESECSAPGEQPKFLGIREQRVTGLMIFILMGSSVFMTSILKFIPMPVLYGVFLY
MGASSLKGIQFFDRIKLFWMPAKHQPDFIYLRHVPLRKVHLFTIIQMSCLGLLWIIKV
SRAAIVFPMMVLALVFVRKLMDLLFTKRELSWLDDLMPESKKKKLEDAEKEEEQSMLA
MEDEGTVQLPLEGHYRDDPSVINISDEMSKTALWRNLLITADNSKDKESSFPSKSSPS
"
BASE COUNT 1013 a 701 c 829 g 993 t
ORIGIN
1 gtgccgggct gagtgtaaga cactgaagac actgcagagc aaggtgctta ttccagaggc
61 gttacaaaac atggagatta aagaccaggg agcccaaatg gagccgctgc tgcctacgag
121 aaatgatgaa gaagcagttg tggatagagg tggaactcgt tctattctca aaacacactt
181 tgagaaagaa gatttagaag gtcatcgaac actatttatt ggagtacatg tgcccttggg
241 aggaagaaaa agccatcgac gtcacaggca tcgtggtcat aaacacagaa agagagacag
301 agaaagagat tcaggattag aggatggaag ggagtcacct tcttttgaca ccccatcaca
361 gagggtacag tttattcttg gaaccgagga tgatgacgag gaacacattc ctcatgacct
421 tttcacagaa ctggatgaga tttgttggcg tgaaggtgag gacgctgagt ggcgagaaac
481 agccaggtgg ttgaagtttg aagaagatgt ggaagatgga ggagaaaggt ggagcaagcc
541 ttatgtggct actctttcat tgcacagctt gtttgaattg agaagttgta ttctgaatgg
601 aactgtgttg ctggacatgc atgccaacac tttagaagaa attgcagata tggttcttga
661 ccaacaagtg agctcaggtc agctgaatga agatgtacgc catagggtcc atgaggcatt
721 gatgaaacag catcatcatc agaatcagaa aaaactcacc aacaggattc ccattgttcg
781 ttcctttgct gatattggca agaaacagtc agaaccaaat tccatggaca aaaatgcagg
841 tcaggttgtt tctcctcagt ctgctccagc ctgtgttgaa aataaaaatg atgttagcag
901 agaaaacagc actgttgact ttagcaaggt tgatctgcat tttatgaaaa agattcctcc
961 aggtgctgaa gcatcgaaca tcttagtggg agaactggag ttcttggatc gaacagtagt
1021 tgcgtttgtc aggttgtctc cagctgtatt gcttcaagga ctggctgaag tcccaatccc
1081 aaccagattt ttgttcattc ttctgggacc cctgggaaag ggtcaacagt accatgagat
1141 tggcagatca attgcaaccc taatgacaga tgaggtattt catgatgttg cctataaagc
1201 taaagatcgt aatgacttgg tatcaggaat tgatgagttt ctggatcagg ttactgttct
1261 ccctcctgga gaatgggatc caagcattcg aatagagcct cccaaaaatg ttccttccca
1321 ggagaagagg aagattcctg ctgtaccaaa tggaacagca gctcatgggg aagcagagcc
1381 ccacggagga catagtggac ctgaactcca gcgaactgga aggatttttg ggggacttat
1441 tttagatatc aaaagaaaag ctccatactt ctggagtgac ttcagagatg ctttcagcct
1501 gcagtgctta gcatcttttc tatttctcta ctgcgcgtgt atgtctcctg tcatcacgtt
1561 tggaggactg ctgggagaag caactgaagg gcgtataagt gcaattgaat ctctctttgg
1621 agcatccatg accgggatag cctattctct ctttggtgga cagcctctta ccatattagg
1681 cagtacagga ccagttttgg tgtttgaaaa gattttgttt aaattttgca aagaatatgg
1741 gctgtcatac ctatctttaa gagctagcat tggactttgg actgcaactc tatgtatcat
1801 acttgtggcc acagatgcta gttcccttgt ctgctacatc actcggttta ctgaagaagc
1861 ttttgcttcc ctgatttgca tcattttcat ttatgaggcc ctggagaagt tgtttgaact
1921 cagtgaagca tatccaatca acatgcataa tgatctggaa ctgctgacac aatactcgtg
1981 taactgtgtg gaaccgcata atcccagcaa tggcacattg aaggaatgga gggaatccaa
2041 tatttctgcc tctgacataa tttgggagaa cctaactgtg tcagaatgca aatcattgca
2101 tggagagtat gttggacggg cctgtggcca tgatcaccca tatgttccag atgttctatt
2161 ttggtctgtg atcctgttct tttccacagt tactctgtca gccaccctga agcagttcaa
2221 gactagcaga tattttccaa ccaaggttcg atccatagtg agtgactttg ctgtctttct
2281 tacaattctg tgtatggttt taattgacta tgccattggg atcccatctc caaaactaca
2341 agtaccaagt gttttcaagc ccactagaga tgatcgtggc tggtttgtta cgcctttagg
2401 tccaaaccca tggtggacag taatagctgc tataattcca gctctgcttt gtactattct
2461 aatttttatg gaccaacaga ttacagctgt catcatcaac aggaaagagc ataagctaaa
2521 gaaaggttgt gggtaccatc tggacctatt aatggtggct gtcatgctcg gtgtatgctc
2581 catcatgggc ctgccatggt ttgtggctgc cacagtcctc tccatcactc atgtcaatag
2641 cctaaaactg gaatcagaat gctcagctcc aggagaacaa cccaaatttc tcggcattcg
2701 ggagcaaagg gttactgggc ttatgatttt tattcttatg ggttcatcag tctttatgac
2761 cagtattctg aagtttattc ccatgccagt gctatatgga gtgtttcttt atatgggtgc
2821 ttcatctcta aagggaattc agttctttga taggataaag ctcttctgga tgccggcaaa
2881 acatcaacca gattttatat acctaaggca cgtaccgctt cgaaaagtgc atctcttcac
2941 aattattcag atgagttgcc ttggcctttt gtggataata aaagtttcaa gagctgctat
3001 tgtctttccc atgatggtgt tagccctggt atttgtaaga aagttgatgg acttgttgtt
3061 cacgaagcgg gaactcagct ggttggatga tttgatgccc gagagtaaga aaaagaaact
3121 ggaagatgct gaaaaagaag aagaacaaag tatgctagct atggaagatg agggcacagt
3181 acaactccca ttggaagggc actatagaga tgatccatct gtgatcaata tatctgatga
3241 aatgtcaaag actgccttgt ggaggaacct tctgattact gccgataact caaaagataa
3301 ggagtcaagc tttccttcca aaagctcccc ttcctaatca ctctagaagc tgattcccca
3361 aagcattgaa agccgaaaag agaagaaagc tgactcaggg aaaggtgttg acagggagac
3421 ttgtctatga ctcgatcttc aatttatttt ttacatatat atgagaagag tgtcacaatt
3481 attaataaaa ctgctttgat catgtattgt aaattctgtc cctcaaccca aatcca
//