LOCUS BC136258 3236 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens EPH receptor A5, mRNA (cDNA clone MGC:167868
IMAGE:9020245), complete cds.
ACCESSION BC136258
VERSION BC136258.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 15 Row: F Column: 11.
FEATURES Location/Qualifiers
source 1..3236
/db_xref="H-InvDB:HIT000500290"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167868 IMAGE:9020245"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGTGTAGT"
gene 1..3236
/gene="EPHA5"
/gene_synonym="CEK7"
/gene_synonym="EHK1"
/gene_synonym="HEK7"
/gene_synonym="TYRO4"
/db_xref="GeneID:2044"
/db_xref="HGNC:HGNC:3389"
/db_xref="MIM:600004"
CDS 21..3137
/gene="EPHA5"
/gene_synonym="CEK7"
/gene_synonym="EHK1"
/gene_synonym="HEK7"
/gene_synonym="TYRO4"
/codon_start=1
/product="EPHA5 protein"
/protein_id="AAI36259.1"
/db_xref="GeneID:2044"
/db_xref="HGNC:HGNC:3389"
/db_xref="MIM:600004"
/translation="MRGSGPRGAGRRRPPSGGGDTPITPASLAGCYSAPRRAPLWTCL
LLCAALRTLLASPSNEVNLLDSRTVMGDLGWIAFPKNGWEEIGEVDENYAPIHTYQVC
KVMEQNQNNWLLTSWISNEGASRIFIELKFTLRDCNSLPGGLGTCKETFNMYYFESDD
QNGRNIKENQYIKIDTIAADESFTELDLGDRVMKLNTEVRDVGPLSKKGFYLAFQDVG
ACIALVSVRVYYKKCPSVVRHLAVFPDTITGADSSQLLEVSGSCVNHSVTDEPPKMHC
SAEGEWLVPIGKCMCKAGYEEKNGTCQVCRPGFFKASPHIQSCGKCPPHSYTHEEAST
SCVCEKDYFRRESDPPTMACTRPPSAPRNAISNVNETSVFLEWIPPADTGGRKDVSYY
IACKKCNSHAGVCEECGGHVRYLPRQSGLKNTSVMMVDLLAHTNYTFEIEAVNGVSDL
SPGARQYVSVNVTTNQAAPSPVTNVKKGKIAKNSISLSWQEPDRPNGIILEYEIKYFE
KDQETSYTIIKSKETTITAEGLKPASVYVFQIRARTAAGYGVFSRRFEFETTPVSVAA
SSDQSQIPVIAVSVTVGVILLAVVIGVLLSGSCCECGCGRASSLCAVAHPSLIWRCGY
SKAKQDPEEEKMHFHNGHIKLPGVRTYIDPHTYEDPNQAVHEFAKEIEASCITIERVI
GAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL
EGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV
HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF
TSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLMLD
CWQKERNSRPKFDEIVNMLDKLIRNPSSLKTLVNASCRVSNLLAEHSPLGSGAYRSVG
EWLEAIKMGRYTEIFMENGYSSMDAVAQVTLEDLRRLGVTLVGHQKKIMNSLQEMKVQ
LVNGMVPL"
BASE COUNT 918 a 697 c 826 g 795 t
ORIGIN
1 cgggaggagg ctcggagaag atgcggggct cggggccccg gggtgcggga cgccggcggc
61 ccccaagcgg cggcggcgac acccccatca ccccagcgtc cctggccggc tgctactctg
121 cacctcgacg ggctcccctc tggacgtgcc ttctcctgtg cgccgcactc cggaccctcc
181 tggccagccc cagcaatgaa gtgaatttat tggattcacg cactgtcatg ggggacctgg
241 gatggattgc ttttccaaaa aatgggtggg aagagattgg tgaagtggat gaaaattatg
301 cccctatcca cacataccaa gtatgcaaag tgatggaaca gaatcagaat aactggcttt
361 tgaccagttg gatctccaat gaaggtgctt ccagaatctt catagaactc aaatttaccc
421 tgcgggactg caacagcctt cctggaggac tggggacctg taaggaaacc tttaatatgt
481 attactttga gtcagatgat cagaatggga gaaacatcaa ggaaaaccaa tacatcaaaa
541 ttgataccat tgctgccgat gaaagcttta cagaacttga tcttggtgac cgtgttatga
601 aactgaatac agaggtcaga gatgtaggac ctctaagcaa aaagggattt tatcttgctt
661 ttcaagatgt tggtgcttgc attgctctgg tttctgtgcg tgtatactat aaaaaatgcc
721 cttctgtggt acgacacttg gctgtcttcc ctgacaccat cactggagct gattcttccc
781 aattgctcga agtgtcaggc tcctgtgtca accattctgt gaccgatgaa cctcccaaaa
841 tgcactgcag cgccgaaggg gagtggctgg tgcccatcgg gaaatgcatg tgcaaggcag
901 gatatgaaga gaaaaatggc acctgtcaag tgtgcagacc tgggttcttc aaagcctcac
961 ctcacatcca gagctgcggc aaatgtccac ctcacagtta tacccatgag gaagcttcaa
1021 cctcttgtgt ctgtgaaaag gattatttca ggagagagtc tgatccaccc acaatggcat
1081 gcacaagacc cccctctgct cctcggaatg ccatctcaaa tgttaatgaa actagtgtct
1141 ttctggaatg gattccgcct gctgacactg gtggaaggaa agacgtgtca tattatattg
1201 catgcaagaa gtgcaactcc catgcaggtg tgtgtgagga gtgtggcggt catgtcaggt
1261 accttccccg gcaaagcggc ctgaaaaaca cctctgtcat gatggtggat ctactcgctc
1321 acacaaacta tacctttgag attgaggcag tgaatggagt gtccgacttg agcccaggag
1381 cccggcagta tgtgtctgta aatgtaacca caaatcaagc agctccatct ccagtcacca
1441 atgtgaaaaa agggaaaatt gcaaaaaaca gcatctcttt gtcttggcaa gaaccagatc
1501 gtcccaatgg aatcatccta gagtatgaaa tcaagtattt tgaaaaggac caagagacca
1561 gctacacgat tatcaaatct aaagagacaa ctattactgc agagggcttg aaaccagctt
1621 cagtttatgt cttccaaatt cgagcacgta cagcagcagg ctatggtgtc ttcagtcgaa
1681 gatttgagtt tgaaaccacc ccagtgtcag ttgcagcatc cagcgatcaa agccagattc
1741 ctgtaattgc tgtgtctgtg acagtgggag tcattttgtt ggcagtggtt atcggcgtcc
1801 tcctcagtgg aagttgctgc gaatgtggct gtgggagggc ttcttccctg tgcgctgttg
1861 cccatccaag cctaatatgg cggtgtggct acagcaaagc aaaacaagat ccagaagagg
1921 aaaagatgca ttttcataat gggcacatta aactgccagg agtaagaact tacattgatc
1981 cacataccta tgaggatccc aatcaagctg tccacgaatt tgctaaggag atagaagcat
2041 catgtatcac cattgagaga gttattggag caggtgaatt tggtgaagtt tgtagtggac
2101 gtttgaaact accaggaaaa agagaattac ctgtggctat caaaaccctt aaagtaggct
2161 atactgaaaa gcaacgcaga gatttcctag gtgaagcaag tatcatggga cagtttgatc
2221 atcctaacat catccattta gaaggtgtgg tgaccaaaag taaaccagtg atgatcgtga
2281 cagagtatat ggagaatggc tctttagata catttttgaa gaaaaacgat gggcagttca
2341 ctgtgattca gcttgttggc atgctgagag gtatctctgc aggaatgaag tacctttctg
2401 acatgggcta tgtgcataga gatcttgctg ccagaaacat cttaatcaac agtaaccttg
2461 tgtgcaaagt gtctgacttt ggactttccc gggtactgga agatgatccc gaggcagcct
2521 acaccacaag gggaggaaaa attccaatca gatggactgc cccagaagca atagctttcc
2581 gaaagtttac ttctgccagt gatgtctgga gttatggaat agtaatgtgg gaagttgtgt
2641 cttatggaga gagaccctac tgggagatga ccaatcaaga tgtgattaaa gcggtagagg
2701 aaggctatcg tctgccaagc cccatggatt gtcctgctgc tctctatcag ttaatgctgg
2761 attgctggca gaaagagcga aatagcaggc ccaagtttga tgaaatagtc aacatgttgg
2821 acaagctgat acgtaaccca agtagtctga agacgctggt taatgcatcc tgcagagtat
2881 ctaatttatt ggcagaacat agcccactag gatctggggc ctacagatca gtaggtgaat
2941 ggctagaggc aatcaagatg ggccggtata cagagatttt catggaaaat ggatacagtt
3001 caatggacgc tgtggctcag gtgaccttgg aggatttgag acggcttgga gtgactcttg
3061 tcggtcacca gaagaagatc atgaacagcc ttcaagaaat gaaggtgcag ctggtaaacg
3121 gaatggtgcc attgtaactt catgtaaatg tcgcttcttc aagtgaatga ttctgcactt
3181 tgtaaacagc actgagattt attttaacaa aaagaggggg aaaagggaaa acagtg
//