LOCUS       BC133708                2080 bp    mRNA    linear   HUM 27-MAR-2007
DEFINITION  Homo sapiens protocadherin gamma subfamily A, 3, mRNA (cDNA clone
            IMAGE:40078126), partial cds.
ACCESSION   BC133708
VERSION     BC133708.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2080)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2080)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (02-MAR-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCG Plate: 14 Row: e Column: 2.
FEATURES             Location/Qualifiers
     source          1..2080
                     /db_xref="H-InvDB:HIT000391132"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40078126"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: NA"
     gene            <1..>2080
                     /gene="PCDHGA3"
                     /gene_synonym="PCDH-GAMMA-A3"
                     /db_xref="GeneID:56112"
                     /db_xref="HGNC:HGNC:8701"
                     /db_xref="MIM:606290"
     CDS             <1..>2080
                     /gene="PCDHGA3"
                     /gene_synonym="PCDH-GAMMA-A3"
                     /codon_start=2
                     /product="PCDHGA3 protein"
                     /protein_id="AAI33709.1"
                     /db_xref="GeneID:56112"
                     /db_xref="HGNC:HGNC:8701"
                     /db_xref="MIM:606290"
                     /translation="TNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSFV
                     GNIANDLGLEPRELAERGVRIVSRGRTQLFSLNSQSGSLVTAERIDREELCAQIPLCL
                     VKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDPD
                     VGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGGD
                     PVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQV
                     SYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKILV
                     TVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPFK
                     LEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPPT
                     FPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSINS
                     NTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPAL
                     PTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTGE
                     VRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAK
                     PNDSETQAIGH"
BASE COUNT          524 a          576 c          531 g          449 t
ORIGIN      
        1 gaccaattgc ctgagtttcc gaaatggcag aggactggcc ctgctgtgcg cgctcctggg
       61 gacgctgtgc gaaacaggat ccggtcagat ccgctactcg gtgtctgagg agctagataa
      121 aggttccttc gtgggcaaca tcgctaacga cctggggcta gagccccggg agctggcgga
      181 gcgcggagtc cgcatcgtct ccagaggtag gacgcagctt ttctctctga attcgcaaag
      241 cggcagcttg gtcaccgcgg agaggataga ccgggaggag ctctgcgctc agatcccgct
      301 gtgtctggta aaaattaaca ttctggttga ggataaattg aaaatttttg aagtagaaat
      361 agaaattaaa gatattaatg ataatgctcc taatttccca acagaggaat tggaaataaa
      421 aattggtgaa ctaacggttc ctggaacccg atttccaatt aaaactgctt ttgacccaga
      481 tgtaggcatt aactccctgc agaactacaa gcttagcccc aatgactact tctctctggc
      541 tgtgaatagc gtctctgagg gggccaagta tccagagctg gtgctggagc gggccctgga
      601 ccgtgagaaa aaagaaattc accagcttgt cctggttgcc tctgatggtg gcgaccctgt
      661 ccactctggc aacttgcaca tccaagtgat agtcctggat gcaaatgaca acccaccaat
      721 gtttactcag cctgagtacc gtgtgagtgt ttgggagaac gtgcctgtgg gtacccggct
      781 gctcacggtg aatgccactg accctgacga gggattcaat gctcaagtgt cttatattct
      841 agataaaatg cctgggaaaa tcgctgagat tttccatctt aactcagtga gtggagaagt
      901 atcaatatta aaaagtctag attatgagga tgccatgttc tatgaaatta aaattgaagc
      961 acaggatgga ccaggtcttc tttcaagagc caagattcta gtcacggttc tggatgtgaa
     1021 tgacaatgct ccagaaatta caatcacgtc tctcacaagc tcagtcccag aagagggcac
     1081 cgttggaaga gaaattgctc ttatcgacgt gcatgaccga gattctgggc agaatgggca
     1141 ggttgaagtt tttgtcctgg gaaatctgcc atttaagtta gaaaaatcaa tagatcaata
     1201 ttaccgctta gtgacggcca catccctgga ccgcgaacaa atatcagaat ataacattag
     1261 tctgagagcc tcagatgggg gaagcccgcc actgtccaca gaaactcaca tcaccctgca
     1321 tgtgattgac atcaatgaca acccacccac cttccctcat ttatcctact ccgcctacat
     1381 tccagaaaac aaccccagag gagcctccat cttctcagtg acagcccagg acccagatag
     1441 caacaacaac gcccgcatca cttatgcatt gaccgaggac actctccagg gggcgcccct
     1501 gtcctccttc gtctctatca actccaacac tggcgtccta tacgcgctga gatccttcga
     1561 ctacgagcaa tttagagact taaagctact ggtgacagcc agcgacagcg ggaaccctcc
     1621 actcagcagc aacgtgtcgc tgaacctgtt cgtgctggac cagaacgaca acgcgcccga
     1681 gatcctgtac cccgccctcc ccacagacgg ttccactggc gtggagctgg cgcctcgctc
     1741 cgcagagccc ggctacctgg tgaccaaggt ggtggcggtg gacagagact cgggccagaa
     1801 cgcctggctg tcctaccgcc tgctcaaggc cagcgagccg ggactcttct cggtgggtct
     1861 gcacacgggc gaggtgcgca cggcgcgagc cctgctggac agagacgcgc tcaagcagag
     1921 cctcgtggtg gccgtccagg accacggcca gccccctctc tccgccactg tcacgctcac
     1981 cgtggccgtg gccgacagga tccccgacat cctggccgac ctgggcagcc tcgagccctc
     2041 cgccaaaccc aacgattcgg aaactcaggc aattggtcat
//