LOCUS       BC133027                1629 bp    mRNA    linear   HUM 10-JAN-2008
DEFINITION  Homo sapiens chromosome 9 open reading frame 117, mRNA (cDNA clone
            IMAGE:40147049), complete cds.
ACCESSION   BC133027
VERSION     BC133027.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1629)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (31-JAN-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 9 Row: P Column: 1
            This clone has the following problem: The cds is short compared to
            the longest cds in the locus.
FEATURES             Location/Qualifiers
     source          1..1629
                     /db_xref="H-InvDB:HIT000391077"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:40147049"
                     /tissue_type="Brain, cerebellum, PCR rescued clones"
                     /clone_lib="NIH_MGC_311"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: GTTCAGCG"
     gene            1..1629
                     /gene="C9orf117"
                     /gene_synonym="RP11-56D16.5"
                     /db_xref="GeneID:286207"
                     /db_xref="HGNC:HGNC:27843"
     CDS             736..1116
                     /gene="C9orf117"
                     /gene_synonym="RP11-56D16.5"
                     /codon_start=1
                     /product="C9orf117 protein"
                     /protein_id="AAI33028.1"
                     /db_xref="GeneID:286207"
                     /db_xref="HGNC:HGNC:27843"
                     /translation="MGTEVGISWTRVGTGATVGLLPPHPHQQMHRDEEDSDVDVTFQP
                     WHKEMLQQLLVMLSSTVATRPQKAACPHQESQSHGPPKESVPWAPTQRSGNAEQRCSG
                     EGARRRGPETRPLRTPEGWAGRAP"
BASE COUNT          339 a          488 c          536 g          266 t
ORIGIN      
        1 tcctgctgag ccagttggag cagagatccc tgcagctgca ggtggataac caggcactga
       61 agtgcgtatg gcccacggag gggcgggcgg cgggtgcagg ctggggccaa gctctggccc
      121 agctctttcc gatcccacga cccaggccag tgacttcccc tctctagagg agcctgccag
      181 acaggctgag gcttggggcg ggatgggggc ccctgtgggc ttggagagaa atggcagggc
      241 ccctggcccc aggtggcccc agtcctgggg aagggggaag gctgttgact catcccagtt
      301 ggggtccagg agccagagag accagctgag cctgcagctg gagcagcagc aggtggattt
      361 gcagcggcta cagcaggaac tggctaatga gcagaaggtt cgggccagcc tggaggcggc
      421 tctggtccag gccacctcct tcctacagaa cattctgcag gtgagcagaa gggagagagg
      481 gagggcgcaa ggggaggggg agtgagcgca agatggaagc tgcttgcaga gaaggggctg
      541 cctcaggatc agaggcccct cttttccctg agagactcct ggaaagtctg tccttcgctg
      601 attctggcct tcaaagatcc ctccaaggtc ttaaaggagc tggattcctt ctctgaggct
      661 ctgaaaggtc ttgggcctca gtcttcccga ctgaagaatg ggtatcccac cacagacagg
      721 gaaaacttcg tggaaatggg cactgaggtt ggaatttcct ggacgagggt gggtactggg
      781 gccactgtgg gcctgctgcc accccaccct caccaacaga tgcaccgcga tgaagaggac
      841 agtgacgttg acgtgacgtt ccagccatgg cacaaggaga tgctgcagca actgctggtc
      901 atgctcagct ccactgtggc cacgagacct cagaaggctg cgtgtcccca ccaggagtca
      961 cagtcccatg gcccacccaa ggagagcgtc ccgtgggccc caacgcagag gagcggaaac
     1021 gcagagcaac gctgcagtgg ggaaggggcg cgaagaaggg gcccagaaac ccgacccctg
     1081 agaactccag aaggctgggc aggcagggcg ccctagtgca ggaacggagc ttcaagaagt
     1141 ttggagcccg tcgagcactg aactcaccag ttaagaaaac agagcagcaa tttgggggca
     1201 ctcggctccc gggacataat ggccgaactg aagctaggga ccgggagccc ctacgtcgcc
     1261 gccccacgcc actcaccatc caccgcttcc ccggggggcg aggctccaaa acacatcggc
     1321 tcatggctct actcagccgc tgtccggcgc ccaaaaagcc gcccggcctc atgctgcccc
     1381 cattcactcc gacaccgccc cctgacgtca tcaccccgca gcagccaatc gtgttgccaa
     1441 ctgtttggcg tccaccgcca acgtccaatc cgggccgggc tacgtggccg ccatgcttct
     1501 gaggggcgga agcggcgagg cggtggccga gtccgggaac ccaggcgcct tcagtagcgc
     1561 ggcgtcacag tgtcccttcg ggacttgtgt gggacgctcg gagctcttgc ttgaccttcg
     1621 gttgggagg
//