LOCUS BC133013 2063 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens eyes shut homolog (Drosophila), mRNA (cDNA clone
IMAGE:40147035), complete cds.
ACCESSION BC133013
VERSION BC133013.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2063)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2063)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: O Column: 11
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2063
/db_xref="H-InvDB:HIT000391064"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40147035"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AAAAAGTG"
gene 1..2063
/gene="EYS"
/gene_synonym="bA166P24.2"
/gene_synonym="bA307F22.3"
/gene_synonym="bA74E24.1"
/gene_synonym="dJ1018A4.2"
/gene_synonym="dJ22I17.2"
/gene_synonym="dJ303F19.1"
/gene_synonym="SPAM"
/db_xref="GeneID:346007"
/db_xref="HGNC:HGNC:21555"
/db_xref="MIM:612424"
CDS 260..2044
/gene="EYS"
/gene_synonym="bA166P24.2"
/gene_synonym="bA307F22.3"
/gene_synonym="bA74E24.1"
/gene_synonym="dJ1018A4.2"
/gene_synonym="dJ22I17.2"
/gene_synonym="dJ303F19.1"
/gene_synonym="SPAM"
/codon_start=1
/product="eyes shut homolog (Drosophila)"
/protein_id="AAI33014.1"
/db_xref="GeneID:346007"
/db_xref="HGNC:HGNC:21555"
/db_xref="MIM:612424"
/translation="MTDKSIVILSLMVFHSSFINGKTCRRQLVEEWHPQPSSYVVNWT
LTENICLDFYRDCWFLGVNTKIDTSGNQAVPQICPLQIQLGDILVISSEPSLQFPEIN
LMNVSETSFVGCVQNTTTEDQLLFGCRLKGMHTVNSKWLSVGTHYFITVMASGPSPCP
LGLRLNVTVKQQFCQESLSSEFCSGHGKCLSEAWSKTYSCHCQPPFSGKYCQELDACS
FKPCKNNGSCINKRENWDEQAYECVCHPPFTGKNCSEIIGQCQPHVCFHGNCSNITSN
SFICECDEQFSGPFCEVSAKPCVSLLFWKRGICPNSSSAYTYECPKGSSSQNGETDVS
EFSLVPCQNGTDCIKISNDVMCICSPIFTDLLCKSIQTSCESFPLRNNATCKKCEKDY
PCSCISGFTEKNCEKAIDHCKLLSINCLNEEWCFNIIGRFKYVCIPGCTKNPCWFLKN
VYLIHQHLCYCGVTFHGICQDKGPAQFEYVWQLGFAGSEGEKCQGVIDAYFFLAANCT
EDATYVNDPEDNNSSCWFPHEGTKEICANGCSCLSEEDSQEYRYLCFLRWAGNMYLEN
TTDDQENECQHEAVCKDEINRPRYLCII"
BASE COUNT 655 a 368 c 413 g 627 t
ORIGIN
1 tggctgtgct gtgttttgat tagattgaag cttggtgtaa agagaaaaca caaaagaccg
61 cagaatattt acaacatttg aattcctgtt tctccatcaa agcacattgt catcaaagct
121 actttgggta tagaaaaaag gtcaattcca attcccagga atccttaacc acaactttac
181 ttggaaattt ccggtaatac ttaaaacacc attttgcagc aattctttat gataaactgt
241 aaaatacagc tacccgaaaa tgactgacaa atcaatcgtc attctgagcc tgatggtttt
301 tcacagctct ttcataaatg gaaaaacatg tagacggcaa ttggtggaag aatggcatcc
361 acaaccctca tcatatgtgg taaattggac actaacagaa aacatctgct tggacttcta
421 cagagattgc tggtttttgg gtgtaaacac taaaatagat acttcaggca atcaagctgt
481 tccccagatt tgccctttgc aaattcaatt aggagatatc cttgtaattt cttctgaacc
541 atctcttcaa tttccagaaa taaatttgat gaatgtttct gaaacatctt tcgttggctg
601 tgtgcaaaat accacaacgg aagatcagtt actttttggc tgcagactaa aaggaatgca
661 cactgttaat tctaagtggc tgagtgttgg gacacattat tttatcacag ttatggcaag
721 tggtccatca ccttgtccac tgggacttcg actaaatgtg acagtgaaac agcagttctg
781 ccaggaatct ctgagttcag aattttgctc tggtcatggt aaatgtctta gtgaagcttg
841 gagcaagaca tatagctgcc attgccagcc tccattttct ggaaaatact gccaggaact
901 tgatgcatgt tcttttaaac catgtaaaaa taatggcagt tgcattaata aaagagaaaa
961 ttgggatgag caagcatatg aatgtgtctg tcacccacca tttacaggaa agaattgctc
1021 agaaataatt ggccagtgtc aaccacatgt ctgtttccat ggaaactgca gcaatattac
1081 ttcaaatagt ttcatttgtg aatgtgatga gcaattttca ggtccattct gtgaggtgtc
1141 agcaaaacct tgtgtttctc tgcttttttg gaaaagagga atttgcccaa atagcagttc
1201 tgcttatact tatgaatgcc caaaaggatc ttccagccaa aatggtgaaa ctgatgtcag
1261 tgagttttca ttagtaccat gtcagaatgg tactgactgc atcaaaatat caaatgatgt
1321 tatgtgcatc tgttcaccaa tatttacaga tttgctttgt aagagcattc aaacatcatg
1381 tgagtcattt cctttgagga ataatgctac atgtaagaaa tgtgagaaag attatccttg
1441 cagctgtata tcaggattta ctgaaaaaaa ctgtgagaaa gcaattgacc actgtaaact
1501 gctcagcatc aactgtctga atgaagaatg gtgtttcaat ataattggaa gattcaaata
1561 tgtatgcatt ccagggtgca caaaaaatcc atgttggttt ttgaagaatg tttacctaat
1621 tcatcaacac ctctgctact gtggagtcac cttccatggt atttgccaag ataaaggtcc
1681 tgctcaattt gaatatgtgt ggcaattggg atttgcagga tctgaaggcg aaaagtgcca
1741 aggggttatt gatgcctatt tctttctggc tgcaaactgc actgaagatg caacctatgt
1801 gaacgatcct gaagataata attcttcatg ttggttccca catgaaggca caaaagagat
1861 ttgtgcaaat ggatgcagtt gtttgagtga agaagacagt caggaatatc ggtatctatg
1921 ttttctcaga tgggctggca acatgtatct ggaaaataca actgatgatc aagaaaatga
1981 gtgtcaacat gaagctgttt gtaaagatga aattaataga cccaggtatt tatgtatcat
2041 ttgagcagat aatatcacat atc
//