LOCUS BC133005 2867 bp mRNA linear HUM 06-DEC-2007
DEFINITION Homo sapiens inositol polyphosphate-4-phosphatase, type II, 105kDa,
mRNA (cDNA clone MGC:164636 IMAGE:40147027), complete cds.
ACCESSION BC133005
VERSION BC133005.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2867)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2867)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (31-JAN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 9 Row: O Column: 3.
FEATURES Location/Qualifiers
source 1..2867
/db_xref="H-InvDB:HIT000391056"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164636 IMAGE:40147027"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AACATACG"
gene 1..2867
/gene="INPP4B"
/db_xref="GeneID:8821"
/db_xref="HGNC:HGNC:6075"
/db_xref="MIM:607494"
CDS 52..2826
/gene="INPP4B"
/codon_start=1
/product="inositol polyphosphate-4-phosphatase, type II,
105kDa"
/protein_id="AAI33006.1"
/db_xref="GeneID:8821"
/db_xref="HGNC:HGNC:6075"
/db_xref="MIM:607494"
/translation="MEIKEEGASEEGQHFLPTAQANDPGDCQFTSIQKTPNEPQLEFI
LACKDLVAPVRDRKLNTLVQISVIHPVEQSLTRYSSTEIVEGTRDPLFLTGVTFPSEY
PIYEETKIKLTVYDVKDKSHDTVRTSVLPEHKDPPPEVGRSFLGYASFKVGELLKSKE
QLLVLSLRTSDGGKVVGTIEVSVVKMGEIEDGEADHITTDVQGQKCALVCECTAPESV
SGKDNLPFLNSVLKNPVCKLYRFPTSDNKWMRIREQMSESILSFHIPKELISLHIKED
LCRNQEIKELGELSPHWDNLRKNVLTHCDQMVNMYQDILTELSKETGSSFKSSSSKGE
KTLEFVPINLHLQRMQVHSPHLKDALYDVITVGAPAAHFQGFKNGGLRKLLHRFETER
RNTGYQFIYYSPENTAKAKEVLSNINQLQPLIATHADLLLNSASQHSPDSLKNSLKML
SEKTELFVHAFKDQLVRSALLALYTARPGGILKKPPSPKSSTEESSPQDQPPVMRGQD
SIPHHSDYDEEEWDRVWANVGKSLNCIIAMVDKLIERDGGSEGSGGNNDGEKEPSLTD
AIPSHPREDWYEQLYPLILTLKDCMGEVVNRAKQSLTFVLLQELAYSLPQCLMLTLRR
DIVFSQALAGLVCGFIIKLQTSLYDPGFLQQLHTVGLIVQYEGLLSTYSDEIGMLEDM
AVGISDLKKVAFKIIEAKSNDVLPVITGRREHYVVEVKLPARMFESLPLQIKEGQLLH
VYPVLFNVGINEQQTLAERFGDVSLQESINQENFELLQEYYKIFMEKMPPDYISHFQE
QNDLKALLENLLQNIQSKKRKNVEIMWLAATICRKLNGIRFTCCKSAKDRTSMSVTLE
QCSILRDEHQLHKDFFIRALDCMRREGCRIENVLKNIKCRKYAFNMLQLMAFPKYYRP
PEGTYGKADT"
BASE COUNT 921 a 594 c 652 g 700 t
ORIGIN
1 tgacatttgg acaagaaaat ttggaaaatt ttaaaactgt gaaggttgat catggaaatt
61 aaagaggaag gggcatcaga agaagggcag cactttcttc ctacagccca ggccaatgat
121 cccggggact gtcagttcac aagtatccag aagactccaa atgaaccgca gttggaattc
181 atccttgcat gcaaggatct cgtggctcct gtccgtgatc gtaaactgaa tacactggtg
241 cagatctccg taatccaccc cgtggagcag agtctgacaa gatactccag caccgaaatt
301 gtggagggaa caagggaccc actgtttttg actggtgtca cattcccatc tgagtatccc
361 atctatgagg agaccaaaat aaaactaaca gtctatgatg tcaaggataa gtctcatgat
421 accgttcgaa ccagtgtcct accagaacat aaggatcccc cgccagaagt tgggcgaagt
481 ttcttgggct atgccagttt taaagtggga gagctgctga agtcaaagga gcaattgctg
541 gtcctgagcc tgagaacttc agatggtggc aaagtggttg gcaccataga agtcagtgtc
601 gtgaagatgg gggagattga ggatggggaa gccgaccaca tcaccacaga tgtacaggga
661 caaaagtgtg ccctggtatg tgaatgtaca gccccggaaa gtgtgagcgg aaaagataac
721 ttaccttttt tgaattcagt gttaaagaac ccagtatgta aattatatag atttcccaca
781 tctgacaata agtggatgcg aattcgagag cagatgtcag agagcattct ttcctttcat
841 attcctaagg aattgatttc ccttcacatt aaagaagatt tgtgcagaaa ccaggagata
901 aaagaacttg gtgagctttc tccacattgg gacaatctgc gaaaaaatgt ccttactcac
961 tgtgatcaaa tggtgaatat gtaccaagac attctgacag aacttagcaa ggaaacaggg
1021 tcctctttca aatcaagcag cagcaaagga gagaaaacat tagaatttgt tccaataaat
1081 ctacatctgc aaagaatgca ggtacacagc cctcacttga aagatgctct ctacgatgtc
1141 atcactgtgg gagccccagc tgcccatttt cagggattta agaatggtgg tcttcggaag
1201 ctactccata gatttgaaac agaaagaaga aataccggat accagtttat ttactattca
1261 cctgaaaaca cagccaaagc aaaggaagtt ctcagcaaca tcaatcaact acaacctctt
1321 atagcaaccc atgcagacct actgcttaat tctgcaagcc agcattctcc agacagcttg
1381 aagaattctt taaagatgct ttcagaaaaa acagagcttt ttgtacatgc cttcaaggat
1441 caacttgtca ggagtgctct tttagcactc tacactgcaa ggccaggagg cattcttaag
1501 aagccaccct ctcctaagag cagtacagag gagagcagtc cccaagacca acccccagtg
1561 atgagagggc aggactccat accacatcat tcagactatg atgaggaaga gtgggacagg
1621 gtgtgggcca atgtggggaa gagcctgaac tgcattattg ctatggtgga caaactgatt
1681 gaaagagatg gtggcagtga aggcagtggc ggcaacaatg atggagaaaa ggaaccttca
1741 ttaacagatg ccattccctc tcacccaaga gaggactggt atgaacagtt gtatcccctc
1801 atccttaccc tgaaggactg catgggagaa gtggtgaacc gagccaagca gtccctgaca
1861 tttgtgctcc ttcaggaact tgcgtacagc ttgccccagt gtctgatgct gacgctaaga
1921 agagacatcg tcttcagcca agcacttgct ggattggttt gtggttttat catcaaatta
1981 cagacaagtc tgtatgaccc aggcttccta cagcagcttc acacagtggg gttgatagta
2041 caatatgaag gactgctaag tacatacagc gatgaaattg gaatgctaga ggacatggcc
2101 gttggcattt ccgatttaaa gaaagtcgca tttaaaataa ttgaagccaa atccaatgat
2161 gtgttgccag ttataacagg aagacgagaa cattacgtgg tagaggtcaa gcttccagcc
2221 agaatgtttg agtcactacc tctacagatt aaagaaggac agttgcttca tgtgtatcca
2281 gtacttttta atgttggaat caatgaacag caaactctgg ctgaaaggtt tggagatgtc
2341 tctttgcaag aaagtattaa tcaggaaaac ttcgaacttc tacaagaata ttacaagata
2401 tttatggaaa agatgcctcc tgattatatt tcacattttc aggaacaaaa tgatttaaaa
2461 gcattgctag aaaatctcct tcaaaatatc caatccaaaa aaagaaagaa tgtagaaatt
2521 atgtggctgg ctgcaacgat ttgccgcaaa ctgaatggta ttcgtttcac ctgttgtaaa
2581 agtgccaaag acaggacatc gatgtcagtg acacttgaac aatgctcaat cttgagagat
2641 gagcaccagt tacacaagga cttctttatc cgagcgctgg attgcatgag aagagaagga
2701 tgccgcatag agaatgtact gaagaatatc aaatgcagaa agtatgcttt caacatgcta
2761 cagctgatgg ctttccccaa gtactacaga cctccagagg ggacttatgg aaaagctgac
2821 acctaagttt accaacatgt taataaacag gaacacaaat acatttc
//